BLASTX nr result

ID: Zingiber23_contig00043182 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00043182
         (264 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

prf||1510387A retrotransposon del1-46                                  55   7e-06
ref|XP_004499744.1| PREDICTED: uncharacterized protein LOC101507...    55   1e-05

>prf||1510387A retrotransposon del1-46
          Length = 1443

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 31/85 (36%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
 Frame = +1

Query: 7   GSVFHGMISIYAFSADILIDTGSSHSFISRTFMREIGRLPTFRL-Q*LTVSLPSGDTLDV 183
           G++   ++SI++    +LIDTGS+HSFI+   ++ +  +P   L   L+V  P G +  V
Sbjct: 332 GTMIRSILSIFSSLCHVLIDTGSTHSFITPRIIKML-EIPVQPLGYILSVISPIGTSTFV 390

Query: 184 TQEVRGCPLDFGNMILTVDLLVLEM 258
            Q  +GC +  GN  LTVDL++L++
Sbjct: 391 NQVCKGCMITIGNQELTVDLIILDL 415


>ref|XP_004499744.1| PREDICTED: uncharacterized protein LOC101507718 [Cicer arietinum]
          Length = 679

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 27/85 (31%), Positives = 48/85 (56%)
 Frame = +1

Query: 10  SVFHGMISIYAFSADILIDTGSSHSFISRTFMREIGRLPTFRLQ*LTVSLPSGDTLDVTQ 189
           +V  G++SI +  A +L D G++HSF+S  F   +G+  +   + L V+ P G  L    
Sbjct: 250 AVVTGILSICSRDAHVLFDPGATHSFVSSWFATRLGKCSSSLDEPLVVATPVGGNLIAKS 309

Query: 190 EVRGCPLDFGNMILTVDLLVLEMVE 264
             R C +     +L+VDL+V++++E
Sbjct: 310 VYRSCDITIDGKVLSVDLVVIDLIE 334


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