BLASTX nr result
ID: Zingiber23_contig00043179
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00043179
(386 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273777.2| PREDICTED: polyribonucleotide nucleotidyltra... 106 4e-21
gb|EMS68952.1| Polyribonucleotide nucleotidyltransferase [Tritic... 101 9e-20
ref|XP_003575367.1| PREDICTED: LOW QUALITY PROTEIN: polyribonucl... 101 9e-20
ref|XP_002454178.1| hypothetical protein SORBIDRAFT_04g026110 [S... 100 2e-19
ref|XP_006338583.1| PREDICTED: polyribonucleotide nucleotidyltra... 100 2e-19
ref|XP_006470281.1| PREDICTED: polyribonucleotide nucleotidyltra... 100 3e-19
ref|XP_006446552.1| hypothetical protein CICLE_v10014159mg [Citr... 100 3e-19
ref|XP_004304642.1| PREDICTED: polyribonucleotide nucleotidyltra... 100 3e-19
ref|XP_006648841.1| PREDICTED: polyribonucleotide nucleotidyltra... 99 4e-19
emb|CBI34890.3| unnamed protein product [Vitis vinifera] 99 4e-19
gb|EOY02463.1| Polyribonucleotide nucleotidyltransferase, putati... 99 8e-19
sp|Q6KAI0.1|PNP2_ORYSJ RecName: Full=Polyribonucleotide nucleoti... 99 8e-19
gb|EEC73607.1| hypothetical protein OsI_08089 [Oryza sativa Indi... 99 8e-19
gb|AFW72337.1| hypothetical protein ZEAMMB73_632002 [Zea mays] 98 1e-18
ref|XP_002524669.1| polyribonucleotide nucleotidyltransferase, p... 98 1e-18
gb|EMJ18896.1| hypothetical protein PRUPE_ppa000918mg [Prunus pe... 97 3e-18
gb|ESW23003.1| hypothetical protein PHAVU_004G011100g [Phaseolus... 96 5e-18
ref|XP_006289585.1| hypothetical protein CARUB_v10003135mg [Caps... 95 8e-18
ref|XP_004232314.1| PREDICTED: polyribonucleotide nucleotidyltra... 95 1e-17
ref|NP_196962.1| polyribonucleotide nucleotidyltransferase [Arab... 95 1e-17
>ref|XP_002273777.2| PREDICTED: polyribonucleotide nucleotidyltransferase-like [Vitis
vinifera]
Length = 964
Score = 106 bits (264), Expect = 4e-21
Identities = 55/77 (71%), Positives = 67/77 (87%), Gaps = 1/77 (1%)
Frame = +2
Query: 158 ASPA-SEQAAGPSPGRKVLEIFREEFEVGSRTVSIETGKIARFANGAVVIAMDDTNVLST 334
+SP+ SEQ P PG KVLE F+EEFE+GSR+++ ETGKIARFANGAVV++MD+T VLST
Sbjct: 39 SSPSISEQI--PVPGMKVLETFKEEFEIGSRSITFETGKIARFANGAVVMSMDETKVLST 96
Query: 335 VASARGDGARDFLPLTV 385
VAS++GD ARDFLPLTV
Sbjct: 97 VASSKGDAARDFLPLTV 113
>gb|EMS68952.1| Polyribonucleotide nucleotidyltransferase [Triticum urartu]
Length = 1374
Score = 101 bits (252), Expect = 9e-20
Identities = 51/71 (71%), Positives = 61/71 (85%), Gaps = 1/71 (1%)
Frame = +2
Query: 176 QAAGPSPGRKVLEIFREEFEVGSRTVSIETGKIARFANGAVVIAMDDTNVLSTVASAR-G 352
QAA P PGRKVLE FREEFE+G R ++ ETGK+ARFANG+VVI+M++TNVLSTVA+A+
Sbjct: 438 QAAPPPPGRKVLESFREEFEIGGRLIAFETGKMARFANGSVVISMEETNVLSTVAAAKSS 497
Query: 353 DGARDFLPLTV 385
D RDFLPLTV
Sbjct: 498 DPVRDFLPLTV 508
>ref|XP_003575367.1| PREDICTED: LOW QUALITY PROTEIN: polyribonucleotide
nucleotidyltransferase-like [Brachypodium distachyon]
Length = 983
Score = 101 bits (252), Expect = 9e-20
Identities = 53/83 (63%), Positives = 65/83 (78%), Gaps = 1/83 (1%)
Frame = +2
Query: 140 AVTLDCASPASEQAAGPSPGRKVLEIFREEFEVGSRTVSIETGKIARFANGAVVIAMDDT 319
A L + ++ AA P PGRKVLE FREEFE+G R ++ ETGKIARFANG+VVI+MDDT
Sbjct: 31 AAFLSDVAEDAQLAAPPPPGRKVLESFREEFEIGGRLIAFETGKIARFANGSVVISMDDT 90
Query: 320 NVLSTVASAR-GDGARDFLPLTV 385
+VLSTVA+++ D RDFLPLTV
Sbjct: 91 HVLSTVAASKSSDPVRDFLPLTV 113
>ref|XP_002454178.1| hypothetical protein SORBIDRAFT_04g026110 [Sorghum bicolor]
gi|241934009|gb|EES07154.1| hypothetical protein
SORBIDRAFT_04g026110 [Sorghum bicolor]
Length = 983
Score = 100 bits (250), Expect = 2e-19
Identities = 51/77 (66%), Positives = 65/77 (84%), Gaps = 1/77 (1%)
Frame = +2
Query: 158 ASPASEQAAGPSPGRKVLEIFREEFEVGSRTVSIETGKIARFANGAVVIAMDDTNVLSTV 337
A+ A+ AA P PGRKVLE FREEFE+G R+++ ETGK+ARFANG+VVI+M+DT+VLSTV
Sbjct: 48 AAEAAAAAAPPVPGRKVLESFREEFEIGGRSIAFETGKMARFANGSVVISMEDTHVLSTV 107
Query: 338 ASAR-GDGARDFLPLTV 385
A+A+ + RDFLPLTV
Sbjct: 108 AAAKSSEPVRDFLPLTV 124
>ref|XP_006338583.1| PREDICTED: polyribonucleotide nucleotidyltransferase 2,
mitochondrial-like [Solanum tuberosum]
Length = 977
Score = 100 bits (249), Expect = 2e-19
Identities = 48/75 (64%), Positives = 60/75 (80%)
Frame = +2
Query: 161 SPASEQAAGPSPGRKVLEIFREEFEVGSRTVSIETGKIARFANGAVVIAMDDTNVLSTVA 340
SP+ P G KVLE F EEFE+GSR +++ETGKIARFANG+V++AM++T VLSTVA
Sbjct: 41 SPSMADTDTPVAGTKVLETFAEEFEIGSRKITLETGKIARFANGSVILAMEETKVLSTVA 100
Query: 341 SARGDGARDFLPLTV 385
S++GD RDFLPLTV
Sbjct: 101 SSKGDAIRDFLPLTV 115
>ref|XP_006470281.1| PREDICTED: polyribonucleotide nucleotidyltransferase 2,
mitochondrial-like [Citrus sinensis]
Length = 974
Score = 100 bits (248), Expect = 3e-19
Identities = 49/74 (66%), Positives = 58/74 (78%)
Frame = +2
Query: 164 PASEQAAGPSPGRKVLEIFREEFEVGSRTVSIETGKIARFANGAVVIAMDDTNVLSTVAS 343
PA A G KVLE F+EEFE+GSR +++ETGKIARFANGAVV+ MD+T VLSTV S
Sbjct: 41 PAPPTPAPSVAGTKVLETFKEEFEIGSRLITLETGKIARFANGAVVLGMDETKVLSTVTS 100
Query: 344 ARGDGARDFLPLTV 385
++GD RDFLPLTV
Sbjct: 101 SKGDSVRDFLPLTV 114
>ref|XP_006446552.1| hypothetical protein CICLE_v10014159mg [Citrus clementina]
gi|557549163|gb|ESR59792.1| hypothetical protein
CICLE_v10014159mg [Citrus clementina]
Length = 973
Score = 100 bits (248), Expect = 3e-19
Identities = 49/74 (66%), Positives = 58/74 (78%)
Frame = +2
Query: 164 PASEQAAGPSPGRKVLEIFREEFEVGSRTVSIETGKIARFANGAVVIAMDDTNVLSTVAS 343
PA A G KVLE F+EEFE+GSR +++ETGKIARFANGAVV+ MD+T VLSTV S
Sbjct: 41 PAPPTPAPSVAGTKVLETFKEEFEIGSRLITLETGKIARFANGAVVLGMDETKVLSTVTS 100
Query: 344 ARGDGARDFLPLTV 385
++GD RDFLPLTV
Sbjct: 101 SKGDSVRDFLPLTV 114
>ref|XP_004304642.1| PREDICTED: polyribonucleotide nucleotidyltransferase 2,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 969
Score = 100 bits (248), Expect = 3e-19
Identities = 47/76 (61%), Positives = 59/76 (77%)
Frame = +2
Query: 158 ASPASEQAAGPSPGRKVLEIFREEFEVGSRTVSIETGKIARFANGAVVIAMDDTNVLSTV 337
+ P E + PG K+LE F E+FE+GSR +++ETGKIARFANG+VV+ MDDT VLSTV
Sbjct: 39 SQPEPEPESHTRPGTKLLETFTEQFEIGSRLITLETGKIARFANGSVVLGMDDTRVLSTV 98
Query: 338 ASARGDGARDFLPLTV 385
SA+GD +DFLPLTV
Sbjct: 99 CSAKGDAVKDFLPLTV 114
>ref|XP_006648841.1| PREDICTED: polyribonucleotide nucleotidyltransferase 2,
mitochondrial-like, partial [Oryza brachyantha]
Length = 947
Score = 99.4 bits (246), Expect = 4e-19
Identities = 50/75 (66%), Positives = 61/75 (81%), Gaps = 1/75 (1%)
Frame = +2
Query: 164 PASEQAAGPSPGRKVLEIFREEFEVGSRTVSIETGKIARFANGAVVIAMDDTNVLSTVAS 343
P ++ P PGRKVLE FR+EFEVG R +S ETGK+ARFANG+VVI+MDDT+VLSTVA+
Sbjct: 12 PQADAPPPPPPGRKVLESFRDEFEVGGRVISFETGKMARFANGSVVISMDDTHVLSTVAA 71
Query: 344 AR-GDGARDFLPLTV 385
A+ + RDFLPLTV
Sbjct: 72 AKSSEPVRDFLPLTV 86
>emb|CBI34890.3| unnamed protein product [Vitis vinifera]
Length = 905
Score = 99.4 bits (246), Expect = 4e-19
Identities = 47/61 (77%), Positives = 57/61 (93%)
Frame = +2
Query: 203 KVLEIFREEFEVGSRTVSIETGKIARFANGAVVIAMDDTNVLSTVASARGDGARDFLPLT 382
KVLE F+EEFE+GSR+++ ETGKIARFANGAVV++MD+T VLSTVAS++GD ARDFLPLT
Sbjct: 2 KVLETFKEEFEIGSRSITFETGKIARFANGAVVMSMDETKVLSTVASSKGDAARDFLPLT 61
Query: 383 V 385
V
Sbjct: 62 V 62
>gb|EOY02463.1| Polyribonucleotide nucleotidyltransferase, putative isoform 1
[Theobroma cacao]
Length = 980
Score = 98.6 bits (244), Expect = 8e-19
Identities = 48/79 (60%), Positives = 60/79 (75%)
Frame = +2
Query: 149 LDCASPASEQAAGPSPGRKVLEIFREEFEVGSRTVSIETGKIARFANGAVVIAMDDTNVL 328
L A+ S+ P G K LE F+EEFE+GSR +S+ETGKIARFANGAVV+ M++T VL
Sbjct: 31 LGFATSESDPPYPPVAGTKFLESFKEEFEIGSRVISLETGKIARFANGAVVLGMEETKVL 90
Query: 329 STVASARGDGARDFLPLTV 385
ST+A+ +GD RDFLPLTV
Sbjct: 91 STIAAGKGDAVRDFLPLTV 109
>sp|Q6KAI0.1|PNP2_ORYSJ RecName: Full=Polyribonucleotide nucleotidyltransferase 2,
mitochondrial; AltName: Full=Polynucleotide
phosphorylase 2; Short=PNPase 2; Flags: Precursor
gi|47847669|dbj|BAD21450.1| putative polyribonucleotide
nucleotidyltransferase [Oryza sativa Japonica Group]
Length = 982
Score = 98.6 bits (244), Expect = 8e-19
Identities = 49/67 (73%), Positives = 58/67 (86%), Gaps = 1/67 (1%)
Frame = +2
Query: 188 PSPGRKVLEIFREEFEVGSRTVSIETGKIARFANGAVVIAMDDTNVLSTVASAR-GDGAR 364
P PGRKVLE FREEFE+G R +S ETGK+ARFANG+VVI+MDDT+VLSTVA+A+ + R
Sbjct: 51 PPPGRKVLESFREEFEIGGRVISFETGKMARFANGSVVISMDDTHVLSTVAAAKSSEPVR 110
Query: 365 DFLPLTV 385
DFLPLTV
Sbjct: 111 DFLPLTV 117
>gb|EEC73607.1| hypothetical protein OsI_08089 [Oryza sativa Indica Group]
Length = 1030
Score = 98.6 bits (244), Expect = 8e-19
Identities = 49/67 (73%), Positives = 58/67 (86%), Gaps = 1/67 (1%)
Frame = +2
Query: 188 PSPGRKVLEIFREEFEVGSRTVSIETGKIARFANGAVVIAMDDTNVLSTVASAR-GDGAR 364
P PGRKVLE FREEFE+G R +S ETGK+ARFANG+VVI+MDDT+VLSTVA+A+ + R
Sbjct: 51 PPPGRKVLESFREEFEIGGRVISFETGKMARFANGSVVISMDDTHVLSTVAAAKSSEPVR 110
Query: 365 DFLPLTV 385
DFLPLTV
Sbjct: 111 DFLPLTV 117
>gb|AFW72337.1| hypothetical protein ZEAMMB73_632002 [Zea mays]
Length = 980
Score = 97.8 bits (242), Expect = 1e-18
Identities = 52/89 (58%), Positives = 69/89 (77%), Gaps = 3/89 (3%)
Frame = +2
Query: 128 SLCNAVTLDCASPASEQAAGPSP--GRKVLEIFREEFEVGSRTVSIETGKIARFANGAVV 301
+L + + A A+ +AA P P GRKVLE FREEFE+G R+++ ETGK+ARFANG+VV
Sbjct: 33 ALLSGAAEEAAPLAAAEAAAPPPVPGRKVLESFREEFEIGGRSIAFETGKMARFANGSVV 92
Query: 302 IAMDDTNVLSTVASAR-GDGARDFLPLTV 385
I+M+DT+VLSTVA+A+ + RDFLPLTV
Sbjct: 93 ISMEDTHVLSTVAAAKSSEPIRDFLPLTV 121
>ref|XP_002524669.1| polyribonucleotide nucleotidyltransferase, putative [Ricinus
communis] gi|223536030|gb|EEF37688.1| polyribonucleotide
nucleotidyltransferase, putative [Ricinus communis]
Length = 958
Score = 97.8 bits (242), Expect = 1e-18
Identities = 46/66 (69%), Positives = 56/66 (84%)
Frame = +2
Query: 188 PSPGRKVLEIFREEFEVGSRTVSIETGKIARFANGAVVIAMDDTNVLSTVASARGDGARD 367
P G KVLE F+EEFE+GS+ +S+ETG+IARFANGAVV++MD T VLSTV S++GD RD
Sbjct: 45 PVAGTKVLETFKEEFEIGSQVISLETGEIARFANGAVVLSMDQTKVLSTVTSSKGDAVRD 104
Query: 368 FLPLTV 385
FLPLTV
Sbjct: 105 FLPLTV 110
>gb|EMJ18896.1| hypothetical protein PRUPE_ppa000918mg [Prunus persica]
Length = 962
Score = 96.7 bits (239), Expect = 3e-18
Identities = 45/66 (68%), Positives = 56/66 (84%)
Frame = +2
Query: 188 PSPGRKVLEIFREEFEVGSRTVSIETGKIARFANGAVVIAMDDTNVLSTVASARGDGARD 367
P G KVLE F+EEFE+G R +++E+GKIARFANGAVV+ M++T VLSTVA+A+GD RD
Sbjct: 49 PVAGTKVLETFKEEFEIGDRLITLESGKIARFANGAVVLGMEETKVLSTVAAAKGDAVRD 108
Query: 368 FLPLTV 385
FLPLTV
Sbjct: 109 FLPLTV 114
>gb|ESW23003.1| hypothetical protein PHAVU_004G011100g [Phaseolus vulgaris]
Length = 982
Score = 95.9 bits (237), Expect = 5e-18
Identities = 46/77 (59%), Positives = 58/77 (75%)
Frame = +2
Query: 155 CASPASEQAAGPSPGRKVLEIFREEFEVGSRTVSIETGKIARFANGAVVIAMDDTNVLST 334
C+ AG + K L+ F E+FE+GSR +++ETGKIARFANGAVV+ M++TNVLST
Sbjct: 26 CSGRLGFDGAGATTTTKHLDTFTEQFEIGSRVITLETGKIARFANGAVVLTMENTNVLST 85
Query: 335 VASARGDGARDFLPLTV 385
V SA+GD RDFLPLTV
Sbjct: 86 VTSAKGDAVRDFLPLTV 102
>ref|XP_006289585.1| hypothetical protein CARUB_v10003135mg [Capsella rubella]
gi|482558291|gb|EOA22483.1| hypothetical protein
CARUB_v10003135mg [Capsella rubella]
Length = 944
Score = 95.1 bits (235), Expect = 8e-18
Identities = 48/72 (66%), Positives = 55/72 (76%)
Frame = +2
Query: 170 SEQAAGPSPGRKVLEIFREEFEVGSRTVSIETGKIARFANGAVVIAMDDTNVLSTVASAR 349
S+ + S G K+LE F+EEFEVGSR VS ETGKIARFANG+VV+ MD T VLSTV A+
Sbjct: 37 SDPGSPASAGTKILESFKEEFEVGSRVVSFETGKIARFANGSVVLGMDQTKVLSTVTCAK 96
Query: 350 GDGARDFLPLTV 385
D RDFLPLTV
Sbjct: 97 TDSPRDFLPLTV 108
>ref|XP_004232314.1| PREDICTED: polyribonucleotide nucleotidyltransferase 2,
mitochondrial-like [Solanum lycopersicum]
Length = 953
Score = 94.7 bits (234), Expect = 1e-17
Identities = 46/75 (61%), Positives = 58/75 (77%)
Frame = +2
Query: 161 SPASEQAAGPSPGRKVLEIFREEFEVGSRTVSIETGKIARFANGAVVIAMDDTNVLSTVA 340
SP+ P KVLE F EEFE+GSR +++ETGKIARFANG+V++AM++T VLSTVA
Sbjct: 41 SPSVANTDTPVARTKVLETFTEEFEIGSRKITLETGKIARFANGSVILAMEETKVLSTVA 100
Query: 341 SARGDGARDFLPLTV 385
S++GD DFLPLTV
Sbjct: 101 SSKGDAISDFLPLTV 115
>ref|NP_196962.1| polyribonucleotide nucleotidyltransferase [Arabidopsis thaliana]
gi|75336830|sp|Q9S7G6.1|PNP2_ARATH RecName:
Full=Polyribonucleotide nucleotidyltransferase 2,
mitochondrial; Short=AtmtPNPase; AltName:
Full=Polynucleotide phosphorylase 2; Short=PNPase 2;
Flags: Precursor gi|4971998|emb|CAB43864.1|
polynucleotide phosphorylase [Arabidopsis thaliana]
gi|4972000|emb|CAB43865.1| polynucleotide phosphorylase
[Arabidopsis thaliana] gi|7573307|emb|CAB87625.1|
polynucleotide phosphorylase [Arabidopsis thaliana]
gi|332004667|gb|AED92050.1| polyribonucleotide
nucleotidyltransferase [Arabidopsis thaliana]
Length = 991
Score = 94.7 bits (234), Expect = 1e-17
Identities = 47/65 (72%), Positives = 53/65 (81%)
Frame = +2
Query: 191 SPGRKVLEIFREEFEVGSRTVSIETGKIARFANGAVVIAMDDTNVLSTVASARGDGARDF 370
S G K+LE F+EEFEVGSR VS ETGKIARFANG+VV+ MD+T VLSTV A+ D RDF
Sbjct: 44 SAGTKILESFKEEFEVGSRVVSFETGKIARFANGSVVLGMDETKVLSTVTCAKTDSPRDF 103
Query: 371 LPLTV 385
LPLTV
Sbjct: 104 LPLTV 108