BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00043159
         (298 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOX92888.1| Pentatricopeptide repeat superfamily protein, put...   114   1e-23
gb|EOX92886.1| Pentatricopeptide repeat superfamily protein, put...   114   1e-23
gb|EOX92885.1| Pentatricopeptide repeat superfamily protein, put...   114   1e-23
ref|XP_004151692.1| PREDICTED: putative pentatricopeptide repeat...   114   2e-23
ref|XP_006833205.1| hypothetical protein AMTR_s00072p00167120 [A...   111   1e-22
ref|XP_006348886.1| PREDICTED: putative pentatricopeptide repeat...   110   2e-22
emb|CBI26532.3| unnamed protein product [Vitis vinifera]              110   2e-22
ref|XP_002274300.1| PREDICTED: putative pentatricopeptide repeat...   110   2e-22
emb|CAN63846.1| hypothetical protein VITISV_010038 [Vitis vinifera]   110   2e-22
ref|XP_004243786.1| PREDICTED: putative pentatricopeptide repeat...   110   2e-22
ref|XP_004232338.1| PREDICTED: putative pentatricopeptide repeat...   107   2e-21
gb|EXB92364.1| hypothetical protein L484_021348 [Morus notabilis]     107   2e-21
ref|XP_006357835.1| PREDICTED: putative pentatricopeptide repeat...   107   2e-21
ref|XP_006398363.1| hypothetical protein EUTSA_v10001221mg [Eutr...   105   5e-21
ref|XP_006450548.1| hypothetical protein CICLE_v10008244mg [Citr...   104   1e-20
ref|XP_006283693.1| hypothetical protein CARUB_v10004757mg [Caps...   103   2e-20
gb|EMJ16555.1| hypothetical protein PRUPE_ppa005519mg [Prunus pe...   103   2e-20
gb|EMJ12810.1| hypothetical protein PRUPE_ppa005509mg [Prunus pe...   103   2e-20
ref|XP_002532784.1| pentatricopeptide repeat-containing protein,...   103   2e-20
sp|P0C043.1|PP318_ARATH RecName: Full=Putative pentatricopeptide...   102   4e-20

>gb|EOX92888.1| Pentatricopeptide repeat superfamily protein, putative isoform 4
           [Theobroma cacao] gi|508700993|gb|EOX92889.1|
           Pentatricopeptide repeat superfamily protein, putative
           isoform 4 [Theobroma cacao]
          Length = 490

 Score =  114 bits (286), Expect = 1e-23
 Identities = 57/77 (74%), Positives = 62/77 (80%)
 Frame = -3

Query: 233 MIRRPSTCLLNVCVASLCKARNLEKAEAVIIDGIRLGCLPDVVTYNTLIDTYCWLEGIDE 54
           M+RR ST LLNVC+AS CKA  LEKAE+VIIDGIRLG LPD VTYN LID YC L GID 
Sbjct: 34  MVRRLSTRLLNVCIASFCKAHKLEKAESVIIDGIRLGVLPDGVTYNILIDAYCRLVGIDA 93

Query: 53  AYSILYRMKEAGIKPDV 3
            YS+L+RM EAGI PDV
Sbjct: 94  GYSVLHRMGEAGISPDV 110


>gb|EOX92886.1| Pentatricopeptide repeat superfamily protein, putative isoform 2
           [Theobroma cacao] gi|508700991|gb|EOX92887.1|
           Pentatricopeptide repeat superfamily protein, putative
           isoform 2 [Theobroma cacao]
          Length = 457

 Score =  114 bits (286), Expect = 1e-23
 Identities = 57/77 (74%), Positives = 62/77 (80%)
 Frame = -3

Query: 233 MIRRPSTCLLNVCVASLCKARNLEKAEAVIIDGIRLGCLPDVVTYNTLIDTYCWLEGIDE 54
           M+RR ST LLNVC+AS CKA  LEKAE+VIIDGIRLG LPD VTYN LID YC L GID 
Sbjct: 1   MVRRLSTRLLNVCIASFCKAHKLEKAESVIIDGIRLGVLPDGVTYNILIDAYCRLVGIDA 60

Query: 53  AYSILYRMKEAGIKPDV 3
            YS+L+RM EAGI PDV
Sbjct: 61  GYSVLHRMGEAGISPDV 77


>gb|EOX92885.1| Pentatricopeptide repeat superfamily protein, putative isoform 1
           [Theobroma cacao]
          Length = 505

 Score =  114 bits (286), Expect = 1e-23
 Identities = 57/77 (74%), Positives = 62/77 (80%)
 Frame = -3

Query: 233 MIRRPSTCLLNVCVASLCKARNLEKAEAVIIDGIRLGCLPDVVTYNTLIDTYCWLEGIDE 54
           M+RR ST LLNVC+AS CKA  LEKAE+VIIDGIRLG LPD VTYN LID YC L GID 
Sbjct: 49  MVRRLSTRLLNVCIASFCKAHKLEKAESVIIDGIRLGVLPDGVTYNILIDAYCRLVGIDA 108

Query: 53  AYSILYRMKEAGIKPDV 3
            YS+L+RM EAGI PDV
Sbjct: 109 GYSVLHRMGEAGISPDV 125


>ref|XP_004151692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like [Cucumis sativus]
           gi|449468117|ref|XP_004151768.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At4g17915-like [Cucumis sativus]
           gi|449532400|ref|XP_004173169.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At4g17915-like [Cucumis sativus]
          Length = 456

 Score =  114 bits (284), Expect = 2e-23
 Identities = 53/77 (68%), Positives = 64/77 (83%)
 Frame = -3

Query: 233 MIRRPSTCLLNVCVASLCKARNLEKAEAVIIDGIRLGCLPDVVTYNTLIDTYCWLEGIDE 54
           M+ + ST  LN+CVAS CK++ ++KAEAVIIDGIR+G LPDVVTYNTLID YC   G+D 
Sbjct: 1   MVCKYSTKFLNICVASFCKSQQMQKAEAVIIDGIRIGVLPDVVTYNTLIDGYCRFSGMDA 60

Query: 53  AYSILYRMKEAGIKPDV 3
           AYS+LYRM+EAGI PDV
Sbjct: 61  AYSVLYRMREAGISPDV 77


>ref|XP_006833205.1| hypothetical protein AMTR_s00072p00167120 [Amborella trichopoda]
           gi|548837856|gb|ERM98483.1| hypothetical protein
           AMTR_s00072p00167120 [Amborella trichopoda]
          Length = 452

 Score =  111 bits (277), Expect = 1e-22
 Identities = 54/77 (70%), Positives = 63/77 (81%)
 Frame = -3

Query: 233 MIRRPSTCLLNVCVASLCKARNLEKAEAVIIDGIRLGCLPDVVTYNTLIDTYCWLEGIDE 54
           MI   ST LLN+C++S CKARNLEKAEA+I+DGIRLG LPD+VTYNTLI  YC   G+D 
Sbjct: 1   MISGLSTRLLNICISSFCKARNLEKAEALIMDGIRLGYLPDIVTYNTLIAAYCRFLGVDA 60

Query: 53  AYSILYRMKEAGIKPDV 3
           AYS+L +MKEAGI PDV
Sbjct: 61  AYSVLDKMKEAGIHPDV 77


>ref|XP_006348886.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like [Solanum tuberosum]
          Length = 460

 Score =  110 bits (276), Expect = 2e-22
 Identities = 54/73 (73%), Positives = 59/73 (80%)
 Frame = -3

Query: 224 RPSTCLLNVCVASLCKARNLEKAEAVIIDGIRLGCLPDVVTYNTLIDTYCWLEGIDEAYS 45
           R ST L+N+CVASLCKA+ LEKAE VI+DGIR+G  PDVVTYNTLI  YC   GID  YS
Sbjct: 7   RLSTRLMNICVASLCKAKQLEKAEVVIVDGIRIGVQPDVVTYNTLITAYCRFVGIDAGYS 66

Query: 44  ILYRMKEAGIKPD 6
           ILYRMKEAGI PD
Sbjct: 67  ILYRMKEAGIYPD 79


>emb|CBI26532.3| unnamed protein product [Vitis vinifera]
          Length = 441

 Score =  110 bits (276), Expect = 2e-22
 Identities = 54/77 (70%), Positives = 62/77 (80%)
 Frame = -3

Query: 233 MIRRPSTCLLNVCVASLCKARNLEKAEAVIIDGIRLGCLPDVVTYNTLIDTYCWLEGIDE 54
           M+ R ST LLN+C+ASLCK   LEKAEAV+IDGIRLG LPDVVTYNTL+  Y    GID 
Sbjct: 1   MVCRFSTKLLNICIASLCKVGQLEKAEAVVIDGIRLGLLPDVVTYNTLLSAYSRFVGIDA 60

Query: 53  AYSILYRMKEAGIKPDV 3
           AYS+++RMKEAGI PDV
Sbjct: 61  AYSVIHRMKEAGISPDV 77


>ref|XP_002274300.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like [Vitis vinifera]
          Length = 457

 Score =  110 bits (276), Expect = 2e-22
 Identities = 54/77 (70%), Positives = 62/77 (80%)
 Frame = -3

Query: 233 MIRRPSTCLLNVCVASLCKARNLEKAEAVIIDGIRLGCLPDVVTYNTLIDTYCWLEGIDE 54
           M+ R ST LLN+C+ASLCK   LEKAEAV+IDGIRLG LPDVVTYNTL+  Y    GID 
Sbjct: 1   MVCRFSTKLLNICIASLCKVGQLEKAEAVVIDGIRLGLLPDVVTYNTLLSAYSRFVGIDA 60

Query: 53  AYSILYRMKEAGIKPDV 3
           AYS+++RMKEAGI PDV
Sbjct: 61  AYSVIHRMKEAGISPDV 77


>emb|CAN63846.1| hypothetical protein VITISV_010038 [Vitis vinifera]
          Length = 457

 Score =  110 bits (276), Expect = 2e-22
 Identities = 54/77 (70%), Positives = 62/77 (80%)
 Frame = -3

Query: 233 MIRRPSTCLLNVCVASLCKARNLEKAEAVIIDGIRLGCLPDVVTYNTLIDTYCWLEGIDE 54
           M+ R ST LLN+C+ASLCK   LEKAEAV+IDGIRLG LPDVVTYNTL+  Y    GID 
Sbjct: 1   MVCRFSTKLLNICIASLCKVGQLEKAEAVVIDGIRLGLLPDVVTYNTLLSAYSRFVGIDA 60

Query: 53  AYSILYRMKEAGIKPDV 3
           AYS+++RMKEAGI PDV
Sbjct: 61  AYSVIHRMKEAGISPDV 77


>ref|XP_004243786.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like [Solanum lycopersicum]
          Length = 460

 Score =  110 bits (275), Expect = 2e-22
 Identities = 53/73 (72%), Positives = 59/73 (80%)
 Frame = -3

Query: 224 RPSTCLLNVCVASLCKARNLEKAEAVIIDGIRLGCLPDVVTYNTLIDTYCWLEGIDEAYS 45
           R ST L+N+CVASLCKA+ LEKAE VI+DGIR+G  PDVVTYNTLI  YC   GID  YS
Sbjct: 7   RLSTRLMNICVASLCKAKQLEKAEVVIVDGIRIGVQPDVVTYNTLITAYCRFVGIDAGYS 66

Query: 44  ILYRMKEAGIKPD 6
           +LYRMKEAGI PD
Sbjct: 67  VLYRMKEAGIYPD 79


>ref|XP_004232338.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like isoform 1 [Solanum lycopersicum]
           gi|460373057|ref|XP_004232339.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At4g17915-like isoform 2 [Solanum lycopersicum]
          Length = 460

 Score =  107 bits (267), Expect = 2e-21
 Identities = 53/72 (73%), Positives = 58/72 (80%)
 Frame = -3

Query: 218 STCLLNVCVASLCKARNLEKAEAVIIDGIRLGCLPDVVTYNTLIDTYCWLEGIDEAYSIL 39
           ST L+NVCVASLCKA+ LEKAE VI+DGIR+G  PDVVTYNTLI  YC   GID  YSIL
Sbjct: 9   STRLMNVCVASLCKAKQLEKAEIVIVDGIRIGLQPDVVTYNTLIAAYCRFVGIDAGYSIL 68

Query: 38  YRMKEAGIKPDV 3
            RMK+AGI PDV
Sbjct: 69  NRMKDAGINPDV 80


>gb|EXB92364.1| hypothetical protein L484_021348 [Morus notabilis]
          Length = 453

 Score =  107 bits (266), Expect = 2e-21
 Identities = 50/72 (69%), Positives = 59/72 (81%)
 Frame = -3

Query: 218 STCLLNVCVASLCKARNLEKAEAVIIDGIRLGCLPDVVTYNTLIDTYCWLEGIDEAYSIL 39
           ST LLN+C+ S CK+R+L KAEAVI+DGIRL  LPDVVTYN L+D YC + G+D AYSIL
Sbjct: 3   STRLLNICITSFCKSRDLAKAEAVIVDGIRLDILPDVVTYNALVDAYCRIVGLDAAYSIL 62

Query: 38  YRMKEAGIKPDV 3
            RM+EAGI PDV
Sbjct: 63  QRMREAGITPDV 74


>ref|XP_006357835.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like isoform X1 [Solanum tuberosum]
           gi|565383043|ref|XP_006357836.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At4g17915-like isoform X2 [Solanum tuberosum]
           gi|565383045|ref|XP_006357837.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At4g17915-like isoform X3 [Solanum tuberosum]
          Length = 460

 Score =  107 bits (266), Expect = 2e-21
 Identities = 52/72 (72%), Positives = 58/72 (80%)
 Frame = -3

Query: 218 STCLLNVCVASLCKARNLEKAEAVIIDGIRLGCLPDVVTYNTLIDTYCWLEGIDEAYSIL 39
           ST L+NVCVASLCKA+ LEKAE VI+DG+R+G  PDVVTYNTLI  YC   GID  YSIL
Sbjct: 9   STRLMNVCVASLCKAKKLEKAEIVIVDGVRIGLQPDVVTYNTLIAAYCRFVGIDAGYSIL 68

Query: 38  YRMKEAGIKPDV 3
            RMK+AGI PDV
Sbjct: 69  NRMKDAGINPDV 80


>ref|XP_006398363.1| hypothetical protein EUTSA_v10001221mg [Eutrema salsugineum]
           gi|557099452|gb|ESQ39816.1| hypothetical protein
           EUTSA_v10001221mg [Eutrema salsugineum]
          Length = 471

 Score =  105 bits (263), Expect = 5e-21
 Identities = 52/72 (72%), Positives = 59/72 (81%)
 Frame = -3

Query: 218 STCLLNVCVASLCKARNLEKAEAVIIDGIRLGCLPDVVTYNTLIDTYCWLEGIDEAYSIL 39
           ST LLN+CV SLCK RNLEK E++IIDGIRLG LPDVVTYNTLI  Y    GIDEAY++ 
Sbjct: 12  STKLLNICVDSLCKFRNLEKVESLIIDGIRLGVLPDVVTYNTLIKGYTRFVGIDEAYAVT 71

Query: 38  YRMKEAGIKPDV 3
            RM+EAGIKPD+
Sbjct: 72  RRMREAGIKPDI 83


>ref|XP_006450548.1| hypothetical protein CICLE_v10008244mg [Citrus clementina]
           gi|568844658|ref|XP_006476201.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At4g17915-like isoform X1 [Citrus sinensis]
           gi|568844660|ref|XP_006476202.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At4g17915-like isoform X2 [Citrus sinensis]
           gi|568844662|ref|XP_006476203.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At4g17915-like isoform X3 [Citrus sinensis]
           gi|557553774|gb|ESR63788.1| hypothetical protein
           CICLE_v10008244mg [Citrus clementina]
          Length = 456

 Score =  104 bits (260), Expect = 1e-20
 Identities = 51/77 (66%), Positives = 57/77 (74%)
 Frame = -3

Query: 233 MIRRPSTCLLNVCVASLCKARNLEKAEAVIIDGIRLGCLPDVVTYNTLIDTYCWLEGIDE 54
           M  + ST LLN+CV + CKA  LEKAEA+IIDGIRLG LPDVVTYN LID YC     D 
Sbjct: 1   MFGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA 60

Query: 53  AYSILYRMKEAGIKPDV 3
            Y+IL RM+EAGI PDV
Sbjct: 61  GYTILNRMREAGISPDV 77


>ref|XP_006283693.1| hypothetical protein CARUB_v10004757mg [Capsella rubella]
           gi|482552398|gb|EOA16591.1| hypothetical protein
           CARUB_v10004757mg [Capsella rubella]
          Length = 463

 Score =  103 bits (257), Expect = 2e-20
 Identities = 50/72 (69%), Positives = 58/72 (80%)
 Frame = -3

Query: 218 STCLLNVCVASLCKARNLEKAEAVIIDGIRLGCLPDVVTYNTLIDTYCWLEGIDEAYSIL 39
           ST LLN+CV SLCK R LEKAE +IIDGIRLG  PDVVTYNTLI  YC   GI+EAY++ 
Sbjct: 12  STRLLNICVDSLCKFRKLEKAECLIIDGIRLGVAPDVVTYNTLISGYCRFVGIEEAYAVT 71

Query: 38  YRMKEAGIKPDV 3
            RM++AGI+PDV
Sbjct: 72  RRMRDAGIRPDV 83


>gb|EMJ16555.1| hypothetical protein PRUPE_ppa005519mg [Prunus persica]
          Length = 456

 Score =  103 bits (257), Expect = 2e-20
 Identities = 50/77 (64%), Positives = 59/77 (76%)
 Frame = -3

Query: 233 MIRRPSTCLLNVCVASLCKARNLEKAEAVIIDGIRLGCLPDVVTYNTLIDTYCWLEGIDE 54
           M R  ST LLN+C+AS CK R LEKAEA+IIDG RLG +PDVVTYNTL+  Y     +D 
Sbjct: 1   MFRGLSTKLLNICIASFCKVRLLEKAEAIIIDGERLGVIPDVVTYNTLVSAYYRYVSLDA 60

Query: 53  AYSILYRMKEAGIKPDV 3
           AYS+++RMKEAGI PDV
Sbjct: 61  AYSVIHRMKEAGISPDV 77


>gb|EMJ12810.1| hypothetical protein PRUPE_ppa005509mg [Prunus persica]
          Length = 457

 Score =  103 bits (257), Expect = 2e-20
 Identities = 48/78 (61%), Positives = 61/78 (78%)
 Frame = -3

Query: 236 VMIRRPSTCLLNVCVASLCKARNLEKAEAVIIDGIRLGCLPDVVTYNTLIDTYCWLEGID 57
           +M+   ST LLN+C+AS CK R LEKAEA++IDGIRLG +PDVVTYNTL+  Y     +D
Sbjct: 1   MMVGGLSTKLLNICIASFCKVRLLEKAEAIVIDGIRLGLIPDVVTYNTLVSAYSRFVSLD 60

Query: 56  EAYSILYRMKEAGIKPDV 3
            AYS+++RMKEAGI P+V
Sbjct: 61  AAYSVIHRMKEAGISPNV 78


>ref|XP_002532784.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527472|gb|EEF29603.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 487

 Score =  103 bits (257), Expect = 2e-20
 Identities = 52/77 (67%), Positives = 60/77 (77%)
 Frame = -3

Query: 233 MIRRPSTCLLNVCVASLCKARNLEKAEAVIIDGIRLGCLPDVVTYNTLIDTYCWLEGIDE 54
           M+RR ST LLN+ +ASLCKA+ L KAE+VIIDGIRLG LPDVVTYNTLID Y      + 
Sbjct: 31  MVRRLSTRLLNISIASLCKAKELNKAESVIIDGIRLGVLPDVVTYNTLIDAYSRFVSFNA 90

Query: 53  AYSILYRMKEAGIKPDV 3
           AYS+L RM+EA I PDV
Sbjct: 91  AYSLLNRMREASISPDV 107


>sp|P0C043.1|PP318_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At4g17915
          Length = 463

 Score =  102 bits (255), Expect = 4e-20
 Identities = 50/72 (69%), Positives = 59/72 (81%)
 Frame = -3

Query: 218 STCLLNVCVASLCKARNLEKAEAVIIDGIRLGCLPDVVTYNTLIDTYCWLEGIDEAYSIL 39
           ST LLN+CV SLCK R LEKAE++IIDGIRLG  PDVVTYNTLI  YC   GI+EAY++ 
Sbjct: 12  STRLLNICVDSLCKFRKLEKAESLIIDGIRLGVDPDVVTYNTLISGYCRFVGIEEAYAVT 71

Query: 38  YRMKEAGIKPDV 3
            RM++AGI+PDV
Sbjct: 72  RRMRDAGIRPDV 83