BLASTX nr result

ID: Zingiber23_contig00043088 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00043088
         (310 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY16378.1| Cyclin A1,1, putative [Theobroma cacao]                 60   4e-07
gb|EOY16371.1| Cyclin A1,1, putative [Theobroma cacao]                 60   4e-07
ref|XP_004960667.1| PREDICTED: cyclin-A1-3-like [Setaria italica]      58   1e-06
ref|XP_003566404.1| PREDICTED: cyclin-A1-1-like [Brachypodium di...    56   6e-06
gb|EMJ24487.1| hypothetical protein PRUPE_ppa005557mg [Prunus pe...    55   1e-05
gb|AFK46051.1| unknown [Lotus japonicus]                               55   1e-05

>gb|EOY16378.1| Cyclin A1,1, putative [Theobroma cacao]
          Length = 499

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 26/29 (89%), Positives = 27/29 (93%)
 Frame = -1

Query: 310 KYSQHKYKFVAKKYCPASIPSEFFQDNTK 224
           KYSQHKYKFVAKKYCPASIP EFFQD +K
Sbjct: 471 KYSQHKYKFVAKKYCPASIPQEFFQDLSK 499


>gb|EOY16371.1| Cyclin A1,1, putative [Theobroma cacao]
          Length = 126

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 26/29 (89%), Positives = 27/29 (93%)
 Frame = -1

Query: 310 KYSQHKYKFVAKKYCPASIPSEFFQDNTK 224
           KYSQHKYKFVAKKYCPASIP EFFQD +K
Sbjct: 98  KYSQHKYKFVAKKYCPASIPQEFFQDLSK 126


>ref|XP_004960667.1| PREDICTED: cyclin-A1-3-like [Setaria italica]
          Length = 476

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 25/28 (89%), Positives = 26/28 (92%)
 Frame = -1

Query: 310 KYSQHKYKFVAKKYCPASIPSEFFQDNT 227
           KYSQHKYKFVAKKYCP SIP+EFFQD T
Sbjct: 448 KYSQHKYKFVAKKYCPPSIPTEFFQDAT 475


>ref|XP_003566404.1| PREDICTED: cyclin-A1-1-like [Brachypodium distachyon]
          Length = 482

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/26 (92%), Positives = 24/26 (92%)
 Frame = -1

Query: 310 KYSQHKYKFVAKKYCPASIPSEFFQD 233
           KYSQHKYKFVAKKYCP SIP EFFQD
Sbjct: 454 KYSQHKYKFVAKKYCPPSIPVEFFQD 479


>gb|EMJ24487.1| hypothetical protein PRUPE_ppa005557mg [Prunus persica]
          Length = 454

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 23/26 (88%), Positives = 24/26 (92%)
 Frame = -1

Query: 310 KYSQHKYKFVAKKYCPASIPSEFFQD 233
           KY QHKYKFVAKKYCP SIP+EFFQD
Sbjct: 426 KYCQHKYKFVAKKYCPPSIPTEFFQD 451


>gb|AFK46051.1| unknown [Lotus japonicus]
          Length = 507

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 23/26 (88%), Positives = 25/26 (96%)
 Frame = -1

Query: 310 KYSQHKYKFVAKKYCPASIPSEFFQD 233
           KYSQHKYK+VAKKYCP SIPSEFFQ+
Sbjct: 482 KYSQHKYKYVAKKYCPPSIPSEFFQN 507


Top