BLASTX nr result

ID: Zingiber23_contig00043022 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00043022
         (280 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW70412.1| putative autophagy domain family protein [Zea mays]     56   6e-06

>gb|AFW70412.1| putative autophagy domain family protein [Zea mays]
          Length = 1143

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 38/87 (43%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
 Frame = +1

Query: 13  STMMMDEVSITSGLLDPKMDHVFGQASKAAEGGDENMSDLSGTLNLHAINSTH-NLMDAS 189
           S++ MDE S TS            Q SK AEGGDENM+D+SG LNL  ++S     +DA 
Sbjct: 726 SSVAMDEASSTSE-----------QPSKQAEGGDENMTDISGALNLQLLDSAACTNLDAF 774

Query: 190 MLEQPRDEGKVDPLVDAVKMMTSQLTM 270
           M E PRD       +D    M +QLTM
Sbjct: 775 MTELPRDNEHKIVNIDKEGHMLTQLTM 801


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