BLASTX nr result

ID: Zingiber23_contig00042872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00042872
         (604 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAY88199.1| hypothetical protein OsI_09647 [Oryza sativa Indi...    57   5e-06
ref|XP_006339576.1| PREDICTED: uncharacterized protein LOC102596...    56   7e-06
ref|XP_006339574.1| PREDICTED: uncharacterized protein LOC102596...    56   7e-06

>gb|EAY88199.1| hypothetical protein OsI_09647 [Oryza sativa Indica Group]
          Length = 879

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 2/185 (1%)
 Frame = -1

Query: 550 PIGHKDQADGDKLLNNDSVVACSESKSLHDKE--KXXXXXXXXXXXXXXNRIRNDPSVAK 377
           P  ++D    D    NDSV    +     DK+  +                I  D   +K
Sbjct: 402 PSVYEDDLQRDSQRINDSVFKVRKDSKQSDKDNLRPLTSGKQKQRNDGLGEINGDIITSK 461

Query: 376 STPPIYEEAKKHLVDMLDAKGPRTSSRTAHVSKSLGKLFSMQEDDALRMKMSHKGEKEIV 197
            TP  YEEAKKHL D+L+     T   T H SKSL  + S+ + +A   + S + +  I 
Sbjct: 462 DTPIFYEEAKKHLTDILEYNSHTTKHPTVHTSKSLIGMLSLPQRNASSPRSSPRLKGCID 521

Query: 196 LTSEEAVSIPLQKFDEDANNSLSPSKHNVEVLSCSIDYQNDEILGLKTEIANKCVVSDPN 17
           L+ EE   I +    +D     +  ++  +  S S+   N E+L  K +     +  +  
Sbjct: 522 LSPEE---INISAIQQDERTEYAKERNLSDEDSGSVACGNSEVLDGKADQDRHSMKQETA 578

Query: 16  HSGNV 2
             G++
Sbjct: 579 QDGDI 583


>ref|XP_006339576.1| PREDICTED: uncharacterized protein LOC102596042 isoform X3 [Solanum
            tuberosum] gi|565344979|ref|XP_006339577.1| PREDICTED:
            uncharacterized protein LOC102596042 isoform X4 [Solanum
            tuberosum]
          Length = 954

 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 49/207 (23%), Positives = 85/207 (41%), Gaps = 20/207 (9%)
 Frame = -1

Query: 595  KERRAISMDGILHKIPIGHKDQADGDKLLNNDSVVACSESKSLHDKEKXXXXXXXXXXXX 416
            K+R  IS +G + + P     + + D+ +  +++   S ++     EK            
Sbjct: 397  KDRHGISPEGTIRRFPSEQLKRCNSDRGIFGENLGWSSPNRDHFYTEKFAKSPLGMKSGD 456

Query: 415  XXNRIRNDPSVAKSTPP---------IYEEAKKHLVDMLDAKGPRTSSRTAHVSKSLGKL 263
               + +   +V  +            IY EAKKHLV+MLD +   T   +  +SKSLG++
Sbjct: 457  KIVKSKGVEAVTLTEASDFPRPGMSNIYIEAKKHLVEMLDNEDETTEVSSGQLSKSLGRI 516

Query: 262  FSMQEDDALRMKMSHKGEKEIVLTSEEAVSIP----------LQKFDEDANNSLSPSKHN 113
             S  E ++       K  K+ +L S+    +           LQ   ED     SPS  +
Sbjct: 517  LSFPEYNSSPGCSPRKNSKDCMLPSQVREPLTDSIQGENDDRLQHVREDHATGPSPSSQD 576

Query: 112  VEV-LSCSIDYQNDEILGLKTEIANKC 35
            +E+  SCS ++ N+      T +   C
Sbjct: 577  IEIESSCSDEHPNESTKSASTNLEVPC 603


>ref|XP_006339574.1| PREDICTED: uncharacterized protein LOC102596042 isoform X1 [Solanum
            tuberosum] gi|565344975|ref|XP_006339575.1| PREDICTED:
            uncharacterized protein LOC102596042 isoform X2 [Solanum
            tuberosum]
          Length = 955

 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 49/207 (23%), Positives = 85/207 (41%), Gaps = 20/207 (9%)
 Frame = -1

Query: 595  KERRAISMDGILHKIPIGHKDQADGDKLLNNDSVVACSESKSLHDKEKXXXXXXXXXXXX 416
            K+R  IS +G + + P     + + D+ +  +++   S ++     EK            
Sbjct: 398  KDRHGISPEGTIRRFPSEQLKRCNSDRGIFGENLGWSSPNRDHFYTEKFAKSPLGMKSGD 457

Query: 415  XXNRIRNDPSVAKSTPP---------IYEEAKKHLVDMLDAKGPRTSSRTAHVSKSLGKL 263
               + +   +V  +            IY EAKKHLV+MLD +   T   +  +SKSLG++
Sbjct: 458  KIVKSKGVEAVTLTEASDFPRPGMSNIYIEAKKHLVEMLDNEDETTEVSSGQLSKSLGRI 517

Query: 262  FSMQEDDALRMKMSHKGEKEIVLTSEEAVSIP----------LQKFDEDANNSLSPSKHN 113
             S  E ++       K  K+ +L S+    +           LQ   ED     SPS  +
Sbjct: 518  LSFPEYNSSPGCSPRKNSKDCMLPSQVREPLTDSIQGENDDRLQHVREDHATGPSPSSQD 577

Query: 112  VEV-LSCSIDYQNDEILGLKTEIANKC 35
            +E+  SCS ++ N+      T +   C
Sbjct: 578  IEIESSCSDEHPNESTKSASTNLEVPC 604


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