BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00042736
         (333 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMS67637.1| Neurofilament heavy polypeptide [Triticum urartu]       74   3e-11
gb|AGE46115.1| arginine/serine-rich splicing factor RS2Z34 trans...    69   5e-10
gb|AGE46057.1| arginine/serine-rich splicing factor RS2Z35 trans...    44   4e-08
gb|AGE46053.1| arginine/serine-rich splicing factor RS2Z37B tran...    51   6e-08
gb|AGE46119.1| arginine/serine-rich splicing factor RS2Z34 trans...    48   1e-06
emb|CBI32650.3| unnamed protein product [Vitis vinifera]               57   2e-06

>gb|EMS67637.1| Neurofilament heavy polypeptide [Triticum urartu]
          Length = 431

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 54/133 (40%), Positives = 62/133 (46%), Gaps = 23/133 (17%)
 Frame = -3

Query: 331 RLYVGRISHRTRARDLEDLFGRYGR------FLGFL------------AQPGGL----WW 218
           RLYVGR+  RTR RDLEDLFGRYGR         FL            A P  +    WW
Sbjct: 40  RLYVGRLPSRTRTRDLEDLFGRYGRAEIETHLFNFLHPMALVIDMVLGAYPTSVSMVDWW 99

Query: 217 EGAIGGFGVYPSKFIGDFGDSFSNVIDVC*WESSPSGV*LIF*GLK*CTFQYLSPDGL-L 41
           EGA+GG G Y  KFI                             L+  TF YL  DG+ +
Sbjct: 100 EGALGGIGGYSRKFI-----------------------------LRGDTFLYLRLDGVTV 130

Query: 40  SGNNFRRVRNVDM 2
           SGN+F RVR+VDM
Sbjct: 131 SGNHFHRVRHVDM 143


>gb|AGE46115.1| arginine/serine-rich splicing factor RS2Z34 transcript II [Sorghum
           bicolor] gi|448878306|gb|AGE46116.1|
           arginine/serine-rich splicing factor RS2Z34 transcript
           III [Sorghum bicolor] gi|448878308|gb|AGE46117.1|
           arginine/serine-rich splicing factor RS2Z34 transcript
           IV [Sorghum bicolor]
          Length = 94

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 33/43 (76%), Positives = 35/43 (81%)
 Frame = -3

Query: 331 RLYVGRISHRTRARDLEDLFGRYGRFLGFLAQPGGLWWEGAIG 203
           RLYVGR+S RTR RDLEDLFGRYGRF G L QP   WWEGA+G
Sbjct: 25  RLYVGRVSSRTRTRDLEDLFGRYGRFWG-LTQPRCPWWEGALG 66


>gb|AGE46057.1| arginine/serine-rich splicing factor RS2Z35 transcript II [Zea
           mays]
          Length = 73

 Score = 43.9 bits (102), Expect(2) = 4e-08
 Identities = 20/29 (68%), Positives = 24/29 (82%)
 Frame = -3

Query: 331 RLYVGRISHRTRARDLEDLFGRYGRFLGF 245
           RLYVGR++ RTR+RDLE LF +YGRF  F
Sbjct: 12  RLYVGRLAPRTRSRDLEYLFSKYGRFSVF 40



 Score = 39.3 bits (90), Expect(2) = 4e-08
 Identities = 17/25 (68%), Positives = 22/25 (88%)
 Frame = -1

Query: 255 FWVFWPNLEVFGGRVPLVDLVSILP 181
           F VF+P +EV GGRVPLV+LV+I+P
Sbjct: 37  FSVFYPTMEVCGGRVPLVELVAIVP 61


>gb|AGE46053.1| arginine/serine-rich splicing factor RS2Z37B transcript II [Zea
           mays] gi|448878182|gb|AGE46054.1| arginine/serine-rich
           splicing factor RS2Z37B transcript III [Zea mays]
          Length = 58

 Score = 50.8 bits (120), Expect(2) = 6e-08
 Identities = 23/35 (65%), Positives = 28/35 (80%)
 Frame = -3

Query: 331 RLYVGRISHRTRARDLEDLFGRYGRFLGFLAQPGG 227
           RLYVGR++ RTR+RDLE LFG+YGRF GF  +  G
Sbjct: 12  RLYVGRLAPRTRSRDLEYLFGKYGRFFGFYREVFG 46



 Score = 31.6 bits (70), Expect(2) = 6e-08
 Identities = 14/15 (93%), Positives = 15/15 (100%)
 Frame = -1

Query: 231 EVFGGRVPLVDLVSI 187
           EVFGGRVPLVDLV+I
Sbjct: 43  EVFGGRVPLVDLVTI 57


>gb|AGE46119.1| arginine/serine-rich splicing factor RS2Z34 transcript VI [Sorghum
           bicolor]
          Length = 74

 Score = 47.8 bits (112), Expect(2) = 1e-06
 Identities = 21/24 (87%), Positives = 22/24 (91%)
 Frame = -3

Query: 331 RLYVGRISHRTRARDLEDLFGRYG 260
           RLYVGR+S RTR RDLEDLFGRYG
Sbjct: 25  RLYVGRVSSRTRTRDLEDLFGRYG 48



 Score = 30.0 bits (66), Expect(2) = 1e-06
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = -1

Query: 240 PNLEVFGGRVPLVDLVSILPSL 175
           P   V GGRVPLV L+++LP L
Sbjct: 50  PTSGVHGGRVPLVQLLAVLPKL 71


>emb|CBI32650.3| unnamed protein product [Vitis vinifera]
          Length = 60

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 28/45 (62%), Positives = 31/45 (68%)
 Frame = -3

Query: 331 RLYVGRISHRTRARDLEDLFGRYGRFLGFLAQPGGLWWEGAIGGF 197
           RLYVGR+S RTR RDLE LF RYGRFLGF      L W   +GG+
Sbjct: 12  RLYVGRLSSRTRTRDLESLFSRYGRFLGFC-----LTWRSMVGGW 51