BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00042719
         (324 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containi...    63   4e-08
ref|XP_002331135.1| predicted protein [Populus trichocarpa] gi|5...    63   5e-08
ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containi...    59   9e-07
emb|CBI36131.3| unnamed protein product [Vitis vinifera]               59   9e-07
gb|EPS70229.1| hypothetical protein M569_04530, partial [Genlise...    57   3e-06
ref|XP_002267810.2| PREDICTED: pentatricopeptide repeat-containi...    57   3e-06
ref|XP_006846299.1| hypothetical protein AMTR_s00012p00252800 [A...    56   4e-06
ref|XP_003533450.1| PREDICTED: pentatricopeptide repeat-containi...    56   4e-06
ref|XP_004512460.1| PREDICTED: pentatricopeptide repeat-containi...    56   6e-06
emb|CBI36755.3| unnamed protein product [Vitis vinifera]               56   6e-06
ref|XP_002284834.1| PREDICTED: putative pentatricopeptide repeat...    56   6e-06
ref|XP_006839028.1| hypothetical protein AMTR_s03531p00004900 [A...    55   7e-06
ref|XP_004305273.1| PREDICTED: putative pentatricopeptide repeat...    55   7e-06
ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containi...    55   7e-06
ref|XP_002510931.1| pentatricopeptide repeat-containing protein,...    55   7e-06
gb|EXB74521.1| hypothetical protein L484_026217 [Morus notabilis]      55   1e-05
gb|EOY06911.1| Tetratricopeptide repeat-like superfamily protein...    55   1e-05

>ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
           gi|449522468|ref|XP_004168248.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 574

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 32/83 (38%), Positives = 52/83 (62%)
 Frame = -1

Query: 249 RSLLEYNHLIRDYXXXXXXXXXXXLFFEMLDAGFFPNEFTFPFVLKSCALLGLFDLVQQI 70
           R+L  +N +IR Y           L+++M D G  P++FTFPFVLK+C+ L   +  ++I
Sbjct: 65  RNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKI 124

Query: 69  HADLVKTGLLASNVFCAGALLDV 1
           H D++++G L S+VF   AL+D+
Sbjct: 125 HKDVIRSG-LESDVFVGAALIDM 146


>ref|XP_002331135.1| predicted protein [Populus trichocarpa]
           gi|566259938|ref|XP_006389523.1| pentatricopeptide
           repeat-containing family protein [Populus trichocarpa]
           gi|550312346|gb|ERP48437.1| pentatricopeptide
           repeat-containing family protein [Populus trichocarpa]
          Length = 799

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 35/91 (38%), Positives = 54/91 (59%)
 Frame = -1

Query: 276 LLNAIPHRARSLLEYNHLIRDYXXXXXXXXXXXLFFEMLDAGFFPNEFTFPFVLKSCALL 97
           + + +PHR ++++ +N LIR Y           L+++ML  G  PN FTFPFVLK+C+ L
Sbjct: 73  VFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSAL 132

Query: 96  GLFDLVQQIHADLVKTGLLASNVFCAGALLD 4
                 ++IH D +K   L SNV+ + AL+D
Sbjct: 133 KEASEGREIHCD-IKRLRLESNVYVSTALVD 162


>ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 648

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 34/92 (36%), Positives = 51/92 (55%)
 Frame = -1

Query: 276 LLNAIPHRARSLLEYNHLIRDYXXXXXXXXXXXLFFEMLDAGFFPNEFTFPFVLKSCALL 97
           L + IP    ++  +N LIR Y           L+++M D G  P+ FTFPFVLK+CA L
Sbjct: 132 LFDRIPKH--NIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAAL 189

Query: 96  GLFDLVQQIHADLVKTGLLASNVFCAGALLDV 1
              +  ++IH  +V+TG    +VF   AL+D+
Sbjct: 190 SAIEHGREIHEHVVQTG-WEKDVFVGAALIDM 220


>emb|CBI36131.3| unnamed protein product [Vitis vinifera]
          Length = 550

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 34/92 (36%), Positives = 51/92 (55%)
 Frame = -1

Query: 276 LLNAIPHRARSLLEYNHLIRDYXXXXXXXXXXXLFFEMLDAGFFPNEFTFPFVLKSCALL 97
           L + IP    ++  +N LIR Y           L+++M D G  P+ FTFPFVLK+CA L
Sbjct: 132 LFDRIPKH--NIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAAL 189

Query: 96  GLFDLVQQIHADLVKTGLLASNVFCAGALLDV 1
              +  ++IH  +V+TG    +VF   AL+D+
Sbjct: 190 SAIEHGREIHEHVVQTG-WEKDVFVGAALIDM 220


>gb|EPS70229.1| hypothetical protein M569_04530, partial [Genlisea aurea]
          Length = 566

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 34/91 (37%), Positives = 47/91 (51%)
 Frame = -1

Query: 276 LLNAIPHRARSLLEYNHLIRDYXXXXXXXXXXXLFFEMLDAGFFPNEFTFPFVLKSCALL 97
           + + IPHR R +  YN LIR             L+ +M  +G FPNEFTFPFVLK+CA L
Sbjct: 41  VFDRIPHRNRHM--YNTLIRASVNRETPSKALLLYRKMFFSGIFPNEFTFPFVLKACAFL 98

Query: 96  GLFDLVQQIHADLVKTGLLASNVFCAGALLD 4
             + L   +H   +K G    +V     L++
Sbjct: 99  KDYRLGVSVHLHALKLGFSRCHVCVQNGLIN 129


>ref|XP_002267810.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 499

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 29/81 (35%), Positives = 47/81 (58%)
 Frame = -1

Query: 243 LLEYNHLIRDYXXXXXXXXXXXLFFEMLDAGFFPNEFTFPFVLKSCALLGLFDLVQQIHA 64
           ++ +N +IR Y           +F EML  G  PN FT+P+VL SC+ +G F   +++HA
Sbjct: 71  IMIWNGMIRGYAYNGPVDRCISMFDEMLQRGLKPNNFTYPYVLSSCSEMGCFGRGRKVHA 130

Query: 63  DLVKTGLLASNVFCAGALLDV 1
            ++K+G   SN   A +LL++
Sbjct: 131 QIMKSG-FESNFIVADSLLNM 150


>ref|XP_006846299.1| hypothetical protein AMTR_s00012p00252800 [Amborella trichopoda]
           gi|548849069|gb|ERN07974.1| hypothetical protein
           AMTR_s00012p00252800 [Amborella trichopoda]
          Length = 627

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 29/86 (33%), Positives = 49/86 (56%)
 Frame = -1

Query: 258 HRARSLLEYNHLIRDYXXXXXXXXXXXLFFEMLDAGFFPNEFTFPFVLKSCALLGLFDLV 79
           H+ ++L + N  I  +           LF ++ + GF PN  TF  VLKSCA LG   + 
Sbjct: 13  HQEKTLFQCNEDISHHAHNGSNTDALILFTQLREFGFKPNASTFSSVLKSCAKLGFLQMG 72

Query: 78  QQIHADLVKTGLLASNVFCAGALLDV 1
           +QIH++++K G   S+++C  +L+D+
Sbjct: 73  KQIHSEVIKLG-FESDIYCGSSLVDM 97


>ref|XP_003533450.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31920-like [Glycine max]
          Length = 604

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 32/79 (40%), Positives = 44/79 (55%)
 Frame = -1

Query: 237 EYNHLIRDYXXXXXXXXXXXLFFEMLDAGFFPNEFTFPFVLKSCALLGLFDLVQQIHADL 58
           EYN +IR             L+ EML+ G  P+ FT+PFVLK+C+LLG      QIHA +
Sbjct: 97  EYNTMIRGNVNSMNLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLGALKEGVQIHAHV 156

Query: 57  VKTGLLASNVFCAGALLDV 1
            K G L  +VF    L+++
Sbjct: 157 FKAG-LEGDVFVQNGLINM 174


>ref|XP_004512460.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31920-like [Cicer arietinum]
          Length = 606

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/79 (37%), Positives = 47/79 (59%)
 Frame = -1

Query: 237 EYNHLIRDYXXXXXXXXXXXLFFEMLDAGFFPNEFTFPFVLKSCALLGLFDLVQQIHADL 58
           +YN +IR             L+ EML+ G  P++FT+PFVLK+C+LLG      QIH  +
Sbjct: 98  DYNTMIRGNVNNMKLDEALLLYVEMLERGIEPDKFTYPFVLKACSLLGALKEGVQIHGHV 157

Query: 57  VKTGLLASNVFCAGALLDV 1
           +KTG L  ++F   +L+++
Sbjct: 158 LKTG-LEGDLFVENSLINM 175


>emb|CBI36755.3| unnamed protein product [Vitis vinifera]
          Length = 751

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 31/82 (37%), Positives = 48/82 (58%)
 Frame = -1

Query: 246 SLLEYNHLIRDYXXXXXXXXXXXLFFEMLDAGFFPNEFTFPFVLKSCALLGLFDLVQQIH 67
           SL  +N +I+ Y           ++ EM   G+ P+ FTFPFVLK+C+L+  ++L Q +H
Sbjct: 69  SLYIWNSMIKGYSISESPDEALTMYREMRQKGYAPDHFTFPFVLKACSLVNGYNLGQCVH 128

Query: 66  ADLVKTGLLASNVFCAGALLDV 1
             +VKTG    +V+ A ALL +
Sbjct: 129 NCIVKTG-FEVDVYAATALLQM 149


>ref|XP_002284834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g05240 [Vitis vinifera]
          Length = 565

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 31/82 (37%), Positives = 48/82 (58%)
 Frame = -1

Query: 246 SLLEYNHLIRDYXXXXXXXXXXXLFFEMLDAGFFPNEFTFPFVLKSCALLGLFDLVQQIH 67
           SL  +N +I+ Y           ++ EM   G+ P+ FTFPFVLK+C+L+  ++L Q +H
Sbjct: 69  SLYIWNSMIKGYSISESPDEALTMYREMRQKGYAPDHFTFPFVLKACSLVNGYNLGQCVH 128

Query: 66  ADLVKTGLLASNVFCAGALLDV 1
             +VKTG    +V+ A ALL +
Sbjct: 129 NCIVKTG-FEVDVYAATALLQM 149


>ref|XP_006839028.1| hypothetical protein AMTR_s03531p00004900 [Amborella trichopoda]
           gi|548841542|gb|ERN01597.1| hypothetical protein
           AMTR_s03531p00004900 [Amborella trichopoda]
          Length = 392

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 31/83 (37%), Positives = 44/83 (53%)
 Frame = -1

Query: 249 RSLLEYNHLIRDYXXXXXXXXXXXLFFEMLDAGFFPNEFTFPFVLKSCALLGLFDLVQQI 70
           R  + +N LI  Y           LF EML  G  P++FTFP +L SCA +G   L  Q+
Sbjct: 207 RDNISWNGLISGYSREGLSEEAMNLFIEMLKHGVAPDDFTFPSILSSCASIGSLALGMQV 266

Query: 69  HADLVKTGLLASNVFCAGALLDV 1
           H   +  G L S+VF + A++D+
Sbjct: 267 HCKTIHCG-LESDVFVSNAIIDM 288


>ref|XP_004305273.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Fragaria vesca subsp. vesca]
          Length = 823

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 36/84 (42%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
 Frame = -1

Query: 249 RSLLEYNHLIRDYXXXXXXXXXXXLFFEMLDAGFFPNEFTFPFVLKSCALLGLFDLV--Q 76
           R  + +N LI  Y           LF EM + G+ P+EFTF  VL  CA +GL D+V  Q
Sbjct: 211 RDAITFNALITGYSKDGLNEVAIKLFAEMQNLGYMPSEFTFAAVL--CAGIGLDDIVLGQ 268

Query: 75  QIHADLVKTGLLASNVFCAGALLD 4
           QIH  ++KT  +  NVF   ALLD
Sbjct: 269 QIHGSVIKTNFI-GNVFVGNALLD 291


>ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Glycine max]
          Length = 667

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 28/64 (43%), Positives = 36/64 (56%)
 Frame = -1

Query: 234 YNHLIRDYXXXXXXXXXXXLFFEMLDAGFFPNEFTFPFVLKSCALLGLFDLVQQIHADLV 55
           YNHLIR Y           LF +M+ AG  PN+FTFPFVLK+CA    +     +HA  +
Sbjct: 105 YNHLIRGYSNSNDPMKSLLLFRQMVSAGPMPNQFTFPFVLKACAAKPFYWEAVIVHAQAI 164

Query: 54  KTGL 43
           K G+
Sbjct: 165 KLGM 168


>ref|XP_002510931.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550046|gb|EEF51533.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 461

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 31/92 (33%), Positives = 51/92 (55%)
 Frame = -1

Query: 276 LLNAIPHRARSLLEYNHLIRDYXXXXXXXXXXXLFFEMLDAGFFPNEFTFPFVLKSCALL 97
           + + + +R  S   +N LI  Y           L+F+M +    P+EFTFP VLK+C  L
Sbjct: 150 MFDEMSNRDESAFAWNSLIAGYSELGLYEDAIALYFQMDEEYVEPDEFTFPRVLKACGGL 209

Query: 96  GLFDLVQQIHADLVKTGLLASNVFCAGALLDV 1
           GL  + + +H DL++ G  A++ F + AL+D+
Sbjct: 210 GLIQVGEAVHRDLIRLG-FANDRFASNALVDM 240


>gb|EXB74521.1| hypothetical protein L484_026217 [Morus notabilis]
          Length = 651

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 32/92 (34%), Positives = 52/92 (56%)
 Frame = -1

Query: 276 LLNAIPHRARSLLEYNHLIRDYXXXXXXXXXXXLFFEMLDAGFFPNEFTFPFVLKSCALL 97
           L + IP R  +L  +N LIR Y           L+ +M D G  P+ +TFPFVLK+C+ L
Sbjct: 134 LFDRIPKR--NLFLWNVLIRGYAWNGPYEVAIALYNQMFDCGLVPDRYTFPFVLKACSAL 191

Query: 96  GLFDLVQQIHADLVKTGLLASNVFCAGALLDV 1
              ++ ++IH  +V T +  ++V+   AL+D+
Sbjct: 192 SAIEVGRKIHERVVYT-MCETDVYVGAALIDM 222


>gb|EOY06911.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
          Length = 628

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 30/90 (33%), Positives = 46/90 (51%)
 Frame = -1

Query: 276 LLNAIPHRARSLLEYNHLIRDYXXXXXXXXXXXLFFEMLDAGFFPNEFTFPFVLKSCALL 97
           L + +PH    +  YN LIR Y            + +ML    FPN+FTFP ++++C+L 
Sbjct: 80  LFDTLPHPDAFI--YNTLIRGYLQRQQPTHCILFYLQMLQHSVFPNKFTFPCLIRACSLA 137

Query: 96  GLFDLVQQIHADLVKTGLLASNVFCAGALL 7
              +   QIHA + K G  A++ FC   L+
Sbjct: 138 NAIEQGSQIHAHVFKFG-FAADTFCLNNLI 166