BLASTX nr result
ID: Zingiber23_contig00042590
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00042590
(232 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004494504.1| PREDICTED: pentatricopeptide repeat-containi... 72 6e-11
gb|ESW35278.1| hypothetical protein PHAVU_001G221600g [Phaseolus... 71 2e-10
ref|XP_004163774.1| PREDICTED: putative pentatricopeptide repeat... 69 5e-10
ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containi... 69 9e-10
emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera] 69 9e-10
gb|EOY11777.1| Tetratricopeptide repeat superfamily protein [The... 68 1e-09
ref|XP_003617808.1| Pentatricopeptide repeat-containing protein ... 67 2e-09
gb|EMT10341.1| hypothetical protein F775_06242 [Aegilops tauschii] 67 2e-09
ref|NP_196272.1| pentatricopeptide repeat-containing protein [Ar... 67 2e-09
ref|XP_004231338.1| PREDICTED: pentatricopeptide repeat-containi... 67 3e-09
ref|XP_003568436.1| PREDICTED: pentatricopeptide repeat-containi... 66 4e-09
ref|XP_004495951.1| PREDICTED: pentatricopeptide repeat-containi... 66 6e-09
ref|XP_004955182.1| PREDICTED: pentatricopeptide repeat-containi... 65 7e-09
gb|EMS64050.1| hypothetical protein TRIUR3_15300 [Triticum urartu] 65 9e-09
ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containi... 65 9e-09
tpg|DAA57875.1| TPA: hypothetical protein ZEAMMB73_657034, parti... 65 9e-09
ref|XP_003557509.1| PREDICTED: pentatricopeptide repeat-containi... 65 9e-09
ref|XP_003609069.1| Pentatricopeptide repeat protein [Medicago t... 65 9e-09
ref|NP_001131178.1| uncharacterized protein LOC100192486 [Zea ma... 65 9e-09
gb|EAZ28899.1| hypothetical protein OsJ_12939 [Oryza sativa Japo... 65 9e-09
>ref|XP_004494504.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cicer arietinum]
Length = 641
Score = 72.4 bits (176), Expect = 6e-11
Identities = 30/38 (78%), Positives = 32/38 (84%)
Frame = +1
Query: 1 CHTVMKLVSEIFRRKIILRDINRFHEFAGGVCSCRDYW 114
CHTVMK SEIFRR+II+RDINRFH F G CSCRDYW
Sbjct: 604 CHTVMKFASEIFRREIIVRDINRFHRFTNGSCSCRDYW 641
>gb|ESW35278.1| hypothetical protein PHAVU_001G221600g [Phaseolus vulgaris]
Length = 701
Score = 70.9 bits (172), Expect = 2e-10
Identities = 29/38 (76%), Positives = 32/38 (84%)
Frame = +1
Query: 1 CHTVMKLVSEIFRRKIILRDINRFHEFAGGVCSCRDYW 114
CHTVMK SEIF+R+II+RDINRFH F G CSCRDYW
Sbjct: 664 CHTVMKFASEIFQREIIVRDINRFHRFTNGSCSCRDYW 701
>ref|XP_004163774.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 556
Score = 69.3 bits (168), Expect = 5e-10
Identities = 28/38 (73%), Positives = 31/38 (81%)
Frame = +1
Query: 1 CHTVMKLVSEIFRRKIILRDINRFHEFAGGVCSCRDYW 114
CHTVMK SEIF R+II+RDINRFH F G+CSC DYW
Sbjct: 519 CHTVMKFASEIFAREIIVRDINRFHHFTNGICSCGDYW 556
>ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 585
Score = 68.6 bits (166), Expect = 9e-10
Identities = 29/38 (76%), Positives = 32/38 (84%)
Frame = +1
Query: 1 CHTVMKLVSEIFRRKIILRDINRFHEFAGGVCSCRDYW 114
CHTVMKL S+IF R+II+RDINRFH FA G CSC DYW
Sbjct: 548 CHTVMKLASKIFDREIIVRDINRFHRFADGFCSCGDYW 585
>emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
Length = 820
Score = 68.6 bits (166), Expect = 9e-10
Identities = 29/38 (76%), Positives = 32/38 (84%)
Frame = +1
Query: 1 CHTVMKLVSEIFRRKIILRDINRFHEFAGGVCSCRDYW 114
CHTVMKL S+IF R+II+RDINRFH FA G CSC DYW
Sbjct: 783 CHTVMKLASKIFDREIIVRDINRFHRFADGFCSCGDYW 820
>gb|EOY11777.1| Tetratricopeptide repeat superfamily protein [Theobroma cacao]
Length = 708
Score = 68.2 bits (165), Expect = 1e-09
Identities = 27/38 (71%), Positives = 31/38 (81%)
Frame = +1
Query: 1 CHTVMKLVSEIFRRKIILRDINRFHEFAGGVCSCRDYW 114
CH VMK SE+F+R+IILRDINRFH F G+CSC DYW
Sbjct: 671 CHMVMKFASEVFKREIILRDINRFHHFRNGLCSCSDYW 708
>ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 811
Score = 67.4 bits (163), Expect = 2e-09
Identities = 26/38 (68%), Positives = 33/38 (86%)
Frame = +1
Query: 1 CHTVMKLVSEIFRRKIILRDINRFHEFAGGVCSCRDYW 114
CHTVMKL+S++ +R+I++RDINRFH F GVCSC DYW
Sbjct: 774 CHTVMKLISKVVQREIVIRDINRFHHFRHGVCSCGDYW 811
>gb|EMT10341.1| hypothetical protein F775_06242 [Aegilops tauschii]
Length = 610
Score = 67.0 bits (162), Expect = 2e-09
Identities = 27/38 (71%), Positives = 32/38 (84%)
Frame = +1
Query: 1 CHTVMKLVSEIFRRKIILRDINRFHEFAGGVCSCRDYW 114
CHTVMKL+SEIF+RKII+RD RFH F GG CSC ++W
Sbjct: 573 CHTVMKLISEIFQRKIIVRDATRFHHFEGGKCSCGEFW 610
>ref|NP_196272.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170345|sp|Q9FG16.1|PP367_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g06540 gi|10178110|dbj|BAB11403.1| selenium-binding
protein-like [Arabidopsis thaliana]
gi|332003649|gb|AED91032.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 622
Score = 67.0 bits (162), Expect = 2e-09
Identities = 26/38 (68%), Positives = 32/38 (84%)
Frame = +1
Query: 1 CHTVMKLVSEIFRRKIILRDINRFHEFAGGVCSCRDYW 114
CHTV KL+SE++ R++I+RD NRFH F GVCSCRDYW
Sbjct: 585 CHTVTKLISEVYGRELIVRDRNRFHHFRNGVCSCRDYW 622
>ref|XP_004231338.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Solanum lycopersicum]
Length = 625
Score = 66.6 bits (161), Expect = 3e-09
Identities = 26/38 (68%), Positives = 32/38 (84%)
Frame = +1
Query: 1 CHTVMKLVSEIFRRKIILRDINRFHEFAGGVCSCRDYW 114
CHT +KLVS+I+ R+II+RD+NRFH F G CSCRDYW
Sbjct: 588 CHTAIKLVSKIYEREIIVRDVNRFHHFKDGSCSCRDYW 625
>ref|XP_003568436.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Brachypodium distachyon]
Length = 610
Score = 66.2 bits (160), Expect = 4e-09
Identities = 26/38 (68%), Positives = 32/38 (84%)
Frame = +1
Query: 1 CHTVMKLVSEIFRRKIILRDINRFHEFAGGVCSCRDYW 114
CHTVMK +SEIF+RKII+RD +RFH F GG CSC ++W
Sbjct: 573 CHTVMKFISEIFQRKIIVRDASRFHHFEGGKCSCSEFW 610
>ref|XP_004495951.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Cicer arietinum]
Length = 571
Score = 65.9 bits (159), Expect = 6e-09
Identities = 26/38 (68%), Positives = 31/38 (81%)
Frame = +1
Query: 1 CHTVMKLVSEIFRRKIILRDINRFHEFAGGVCSCRDYW 114
CH VMK+VS F+R+II+RD NRFH F GVCSC+DYW
Sbjct: 534 CHVVMKMVSREFKREIIVRDCNRFHHFKNGVCSCKDYW 571
>ref|XP_004955182.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Setaria italica]
Length = 548
Score = 65.5 bits (158), Expect = 7e-09
Identities = 26/38 (68%), Positives = 31/38 (81%)
Frame = +1
Query: 1 CHTVMKLVSEIFRRKIILRDINRFHEFAGGVCSCRDYW 114
CH MKL+SEI RR+I++RD NRFH F G+CSCRDYW
Sbjct: 511 CHAAMKLISEITRREIVVRDRNRFHCFKNGICSCRDYW 548
>gb|EMS64050.1| hypothetical protein TRIUR3_15300 [Triticum urartu]
Length = 414
Score = 65.1 bits (157), Expect = 9e-09
Identities = 26/38 (68%), Positives = 31/38 (81%)
Frame = +1
Query: 1 CHTVMKLVSEIFRRKIILRDINRFHEFAGGVCSCRDYW 114
CH VMKL+SEIF+RKII+RD RFH F GG CSC ++W
Sbjct: 377 CHVVMKLISEIFQRKIIVRDATRFHHFEGGKCSCGEFW 414
>ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 65.1 bits (157), Expect = 9e-09
Identities = 26/38 (68%), Positives = 31/38 (81%)
Frame = +1
Query: 1 CHTVMKLVSEIFRRKIILRDINRFHEFAGGVCSCRDYW 114
CHTVMK++SEI RKI++RD NRFH F G+CSC DYW
Sbjct: 608 CHTVMKMISEITGRKIVMRDRNRFHHFEDGLCSCGDYW 645
>tpg|DAA57875.1| TPA: hypothetical protein ZEAMMB73_657034, partial [Zea mays]
Length = 1822
Score = 65.1 bits (157), Expect = 9e-09
Identities = 25/38 (65%), Positives = 31/38 (81%)
Frame = +1
Query: 1 CHTVMKLVSEIFRRKIILRDINRFHEFAGGVCSCRDYW 114
CH +KLVS++F R+I++RD NRFH F GG CSCRDYW
Sbjct: 1785 CHRYIKLVSKVFNREIVMRDRNRFHHFKGGECSCRDYW 1822
>ref|XP_003557509.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 615
Score = 65.1 bits (157), Expect = 9e-09
Identities = 26/38 (68%), Positives = 31/38 (81%)
Frame = +1
Query: 1 CHTVMKLVSEIFRRKIILRDINRFHEFAGGVCSCRDYW 114
CH++ KLVS +F R+IILRD+NRFH F GVCSC DYW
Sbjct: 578 CHSMAKLVSMVFNRRIILRDLNRFHHFEDGVCSCGDYW 615
>ref|XP_003609069.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510124|gb|AES91266.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 611
Score = 65.1 bits (157), Expect = 9e-09
Identities = 25/38 (65%), Positives = 33/38 (86%)
Frame = +1
Query: 1 CHTVMKLVSEIFRRKIILRDINRFHEFAGGVCSCRDYW 114
CHTVMKL+S++++ +II+RD +RFH F GG CSCRDYW
Sbjct: 574 CHTVMKLISKVYQVEIIVRDRSRFHSFKGGFCSCRDYW 611
>ref|NP_001131178.1| uncharacterized protein LOC100192486 [Zea mays]
gi|194690792|gb|ACF79480.1| unknown [Zea mays]
Length = 617
Score = 65.1 bits (157), Expect = 9e-09
Identities = 25/38 (65%), Positives = 31/38 (81%)
Frame = +1
Query: 1 CHTVMKLVSEIFRRKIILRDINRFHEFAGGVCSCRDYW 114
CH +KLVS++F R+I++RD NRFH F GG CSCRDYW
Sbjct: 580 CHRYIKLVSKVFNREIVMRDRNRFHHFKGGECSCRDYW 617
>gb|EAZ28899.1| hypothetical protein OsJ_12939 [Oryza sativa Japonica Group]
Length = 611
Score = 65.1 bits (157), Expect = 9e-09
Identities = 26/38 (68%), Positives = 31/38 (81%)
Frame = +1
Query: 1 CHTVMKLVSEIFRRKIILRDINRFHEFAGGVCSCRDYW 114
CH++ KLVS +F R+IILRD+NRFH F GVCSC DYW
Sbjct: 574 CHSMAKLVSMVFNRRIILRDLNRFHHFEDGVCSCGDYW 611