BLASTX nr result
ID: Zingiber23_contig00042536
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00042536
(326 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002444001.1| hypothetical protein SORBIDRAFT_07g005650 [S... 68 1e-09
ref|XP_004972631.1| PREDICTED: pentatricopeptide repeat-containi... 65 7e-09
ref|XP_002456972.1| hypothetical protein SORBIDRAFT_03g046570 [S... 65 9e-09
gb|AFW56956.1| hypothetical protein ZEAMMB73_276172 [Zea mays] 64 2e-08
ref|XP_004960777.1| PREDICTED: pentatricopeptide repeat-containi... 61 1e-07
ref|XP_004960775.1| PREDICTED: pentatricopeptide repeat-containi... 61 1e-07
ref|XP_006663648.1| PREDICTED: pentatricopeptide repeat-containi... 59 5e-07
tpg|DAA55754.1| TPA: hypothetical protein ZEAMMB73_281441 [Zea m... 57 3e-06
gb|ABA95188.1| salt-inducible protein, putative [Oryza sativa Ja... 57 3e-06
gb|EEE52515.1| hypothetical protein OsJ_34721 [Oryza sativa Japo... 57 3e-06
gb|EEC73691.1| hypothetical protein OsI_08267 [Oryza sativa Indi... 57 3e-06
>ref|XP_002444001.1| hypothetical protein SORBIDRAFT_07g005650 [Sorghum bicolor]
gi|241940351|gb|EES13496.1| hypothetical protein
SORBIDRAFT_07g005650 [Sorghum bicolor]
Length = 824
Score = 67.8 bits (164), Expect = 1e-09
Identities = 39/107 (36%), Positives = 61/107 (57%)
Frame = +1
Query: 4 VLRRLRSLERKPDRALAYFNRIEALGFHHDRSTYSAIVRILANSCRYEQLVTVFGKLISS 183
V++ LR L RKP A AYF I +LGFHHD STYS I++IL++S + + LV +F +++SS
Sbjct: 68 VVQALRCLRRKPAVAFAYFKDINSLGFHHDFSTYSEIIQILSHSFQGKMLVALFCEILSS 127
Query: 184 GRDNXXXXXXXXXXXXPTLNDSPSLNCALDSMVISYTSYGTTVEAVD 324
+ T S L+ A++ ++ +YT+ E V+
Sbjct: 128 TGNGGPEILTLIDHLSKTCATSHVLSYAVNCLIKAYTTSHDAQETVE 174
>ref|XP_004972631.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial-like isoform X1 [Setaria italica]
gi|514792688|ref|XP_004972632.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g26790,
mitochondrial-like isoform X2 [Setaria italica]
Length = 817
Score = 65.5 bits (158), Expect = 7e-09
Identities = 38/98 (38%), Positives = 57/98 (58%)
Frame = +1
Query: 4 VLRRLRSLERKPDRALAYFNRIEALGFHHDRSTYSAIVRILANSCRYEQLVTVFGKLISS 183
V++ LR L RKP A AYF +LGFHHD STYS IV+IL++S + E LV++F ++IS+
Sbjct: 68 VVQTLRCLRRKPAVAFAYFKDTHSLGFHHDFSTYSEIVQILSHSFKGEMLVSLFCEIISA 127
Query: 184 GRDNXXXXXXXXXXXXPTLNDSPSLNCALDSMVISYTS 297
T S L+ A++ ++ +YT+
Sbjct: 128 TDGGGPDILTHIDHLRKTCVTSHVLSFAVNCLIKAYTT 165
>ref|XP_002456972.1| hypothetical protein SORBIDRAFT_03g046570 [Sorghum bicolor]
gi|241928947|gb|EES02092.1| hypothetical protein
SORBIDRAFT_03g046570 [Sorghum bicolor]
Length = 821
Score = 65.1 bits (157), Expect = 9e-09
Identities = 38/107 (35%), Positives = 58/107 (54%)
Frame = +1
Query: 4 VLRRLRSLERKPDRALAYFNRIEALGFHHDRSTYSAIVRILANSCRYEQLVTVFGKLISS 183
V+ LR L RKP A AYF +LGFHHD STYS I++IL++S + + LV++F +++S
Sbjct: 68 VVHTLRYLRRKPAVAFAYFKDTHSLGFHHDFSTYSEIIQILSHSFQGKMLVSLFCEILSG 127
Query: 184 GRDNXXXXXXXXXXXXPTLNDSPSLNCALDSMVISYTSYGTTVEAVD 324
T S L+ A++ ++ +YT+ E VD
Sbjct: 128 TDSGGPEILALIDHLRKTCATSHVLSYAVNCLIKAYTTCHDAQETVD 174
>gb|AFW56956.1| hypothetical protein ZEAMMB73_276172 [Zea mays]
Length = 666
Score = 64.3 bits (155), Expect = 2e-08
Identities = 37/107 (34%), Positives = 61/107 (57%)
Frame = +1
Query: 4 VLRRLRSLERKPDRALAYFNRIEALGFHHDRSTYSAIVRILANSCRYEQLVTVFGKLISS 183
V++ LR L RKP A AYF I +LGF+HD STYS I++IL++S + + LV++F +++S
Sbjct: 67 VVQALRCLRRKPAVAFAYFKDIHSLGFNHDFSTYSEIIQILSHSFQGKMLVSLFCEILSG 126
Query: 184 GRDNXXXXXXXXXXXXPTLNDSPSLNCALDSMVISYTSYGTTVEAVD 324
+ T S L+ A++ ++ +YT+ E V+
Sbjct: 127 TANGDPEILTLIGHLSKTCATSHILSYAVNCLIKAYTNSHDVQETVE 173
>ref|XP_004960777.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial-like isoform X3 [Setaria italica]
Length = 795
Score = 61.2 bits (147), Expect = 1e-07
Identities = 32/97 (32%), Positives = 54/97 (55%)
Frame = +1
Query: 4 VLRRLRSLERKPDRALAYFNRIEALGFHHDRSTYSAIVRILANSCRYEQLVTVFGKLISS 183
+++ LR L RKP A AYF E++GFHHD STYS I+ IL +S + + L+++F +++S
Sbjct: 68 IVQTLRCLRRKPAVAFAYFKDTESIGFHHDFSTYSEIIHILTHSLQGKMLISLFCEIVSP 127
Query: 184 GRDNXXXXXXXXXXXXPTLNDSPSLNCALDSMVISYT 294
T +L+ A++ ++ +YT
Sbjct: 128 TGSGGPEILALMNHLRRTCAAPHALSFAINCLIKAYT 164
>ref|XP_004960775.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial-like isoform X1 [Setaria italica]
gi|514745005|ref|XP_004960776.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g26790,
mitochondrial-like isoform X2 [Setaria italica]
Length = 796
Score = 61.2 bits (147), Expect = 1e-07
Identities = 32/97 (32%), Positives = 54/97 (55%)
Frame = +1
Query: 4 VLRRLRSLERKPDRALAYFNRIEALGFHHDRSTYSAIVRILANSCRYEQLVTVFGKLISS 183
+++ LR L RKP A AYF E++GFHHD STYS I+ IL +S + + L+++F +++S
Sbjct: 68 IVQTLRCLRRKPAVAFAYFKDTESIGFHHDFSTYSEIIHILTHSLQGKMLISLFCEIVSP 127
Query: 184 GRDNXXXXXXXXXXXXPTLNDSPSLNCALDSMVISYT 294
T +L+ A++ ++ +YT
Sbjct: 128 TGSGGPEILALMNHLRRTCAAPHALSFAINCLIKAYT 164
>ref|XP_006663648.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial-like [Oryza brachyantha]
Length = 820
Score = 59.3 bits (142), Expect = 5e-07
Identities = 30/96 (31%), Positives = 55/96 (57%)
Frame = +1
Query: 4 VLRRLRSLERKPDRALAYFNRIEALGFHHDRSTYSAIVRILANSCRYEQLVTVFGKLISS 183
V++ L L+R+P A AYF +++GF+HD STYS +++IL++S + + +V++F +L+SS
Sbjct: 69 VVQTLHCLKRRPAIAFAYFKDTQSIGFNHDLSTYSEMIQILSHSRQGKMMVSLFSELVSS 128
Query: 184 GRDNXXXXXXXXXXXXPTLNDSPSLNCALDSMVISY 291
T SL+ +D ++ +Y
Sbjct: 129 SNGKGPEILSLVDHHRRTCGTPYSLSFTIDCLIKAY 164
>tpg|DAA55754.1| TPA: hypothetical protein ZEAMMB73_281441 [Zea mays]
Length = 891
Score = 57.0 bits (136), Expect = 3e-06
Identities = 27/58 (46%), Positives = 41/58 (70%)
Frame = +1
Query: 4 VLRRLRSLERKPDRALAYFNRIEALGFHHDRSTYSAIVRILANSCRYEQLVTVFGKLI 177
V++ LR L RKP A YF +LGFHHD STYS I++IL++S + + LV++F +++
Sbjct: 74 VVQTLRCLRRKPAVAFTYFKDTHSLGFHHDFSTYSEIIQILSHSFQGKMLVSLFREIL 131
>gb|ABA95188.1| salt-inducible protein, putative [Oryza sativa Japonica Group]
Length = 938
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/60 (43%), Positives = 45/60 (75%)
Frame = +1
Query: 4 VLRRLRSLERKPDRALAYFNRIEALGFHHDRSTYSAIVRILANSCRYEQLVTVFGKLISS 183
V++ L L+R+P A AYF +++GF+HD STYS +++IL++S + + LV++F +L+SS
Sbjct: 187 VVQTLHCLKRRPAIAFAYFKDTQSIGFNHDFSTYSEMIQILSHSRQGKMLVSLFSELVSS 246
>gb|EEE52515.1| hypothetical protein OsJ_34721 [Oryza sativa Japonica Group]
Length = 820
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/60 (43%), Positives = 45/60 (75%)
Frame = +1
Query: 4 VLRRLRSLERKPDRALAYFNRIEALGFHHDRSTYSAIVRILANSCRYEQLVTVFGKLISS 183
V++ L L+R+P A AYF +++GF+HD STYS +++IL++S + + LV++F +L+SS
Sbjct: 69 VVQTLHCLKRRPAIAFAYFKDTQSIGFNHDFSTYSEMIQILSHSRQGKMLVSLFSELVSS 128
>gb|EEC73691.1| hypothetical protein OsI_08267 [Oryza sativa Indica Group]
Length = 751
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/60 (43%), Positives = 45/60 (75%)
Frame = +1
Query: 4 VLRRLRSLERKPDRALAYFNRIEALGFHHDRSTYSAIVRILANSCRYEQLVTVFGKLISS 183
V++ L L+R+P A AYF +++GF+HD STYS +++IL++S + + LV++F +L+SS
Sbjct: 48 VVQTLHCLKRRPAIAFAYFKDTQSIGFNHDFSTYSEMIQILSHSRQGKMLVSLFSELVSS 107