BLASTX nr result

ID: Zingiber23_contig00041013 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00041013
         (345 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612150.1| hypothetical protein MTR_5g021840 [Medicago ...    61   1e-07
ref|XP_006826630.1| hypothetical protein AMTR_s00267p00017380 [A...    57   2e-06
ref|XP_006857261.1| hypothetical protein AMTR_s00199p00024430 [A...    57   3e-06

>ref|XP_003612150.1| hypothetical protein MTR_5g021840 [Medicago truncatula]
           gi|355513485|gb|AES95108.1| hypothetical protein
           MTR_5g021840 [Medicago truncatula]
          Length = 116

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
 Frame = +2

Query: 47  QCMPRLWRKPLP--MPAPASILERFREAVFKLMISSAVSKGXXXXXXXXXXXXXXLQLAP 220
           QCMPRL        +P+P ++LERFREAVF+LM+ SA SK                    
Sbjct: 5   QCMPRLKSNSYKNKIPSPMTLLERFREAVFRLMMMSAFSKTATNHGGSGDGERQRRYSHY 64

Query: 221 DSYRSEAVEDCIKFFKRSAAANADRS 298
           D++ SEAV DCI+F K+ AA + + +
Sbjct: 65  DTHNSEAVADCIEFIKKKAARDTEEN 90


>ref|XP_006826630.1| hypothetical protein AMTR_s00267p00017380 [Amborella trichopoda]
           gi|548831013|gb|ERM93867.1| hypothetical protein
           AMTR_s00267p00017380 [Amborella trichopoda]
          Length = 165

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
 Frame = +2

Query: 29  GRRHASQ-CMPRLWRKPLPMPAPASILERFREAVFKLMISSAVSKGXXXXXXXXXXXXXX 205
           GR   S+ C+PRL    L   +P SILER REA+ +L++ SA++KG              
Sbjct: 43  GRNMKSKICIPRLRSNRL---SPVSILERLREAILRLIMISAIAKGAPQSGLSSGTRGGT 99

Query: 206 LQLAPDSYRSEAVEDCIKFFKRSAAA 283
                DS+ SEAV DCI+FFK+SA +
Sbjct: 100 PNHPLDSHYSEAVADCIEFFKKSACS 125


>ref|XP_006857261.1| hypothetical protein AMTR_s00199p00024430 [Amborella trichopoda]
           gi|548861353|gb|ERN18728.1| hypothetical protein
           AMTR_s00199p00024430 [Amborella trichopoda]
          Length = 120

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 33/78 (42%), Positives = 45/78 (57%)
 Frame = +2

Query: 50  CMPRLWRKPLPMPAPASILERFREAVFKLMISSAVSKGXXXXXXXXXXXXXXLQLAPDSY 229
           C+PRL    L   +P SILER REA+ +L++ SA++KG                   DS+
Sbjct: 6   CIPRLSSNRL---SPVSILERLREAILRLIMISAIAKGARQSGLSSGTRGGTPNHPLDSH 62

Query: 230 RSEAVEDCIKFFKRSAAA 283
            SEAV DCI+FFK+SA +
Sbjct: 63  YSEAVTDCIEFFKKSACS 80


Top