BLASTX nr result

ID: Zingiber23_contig00040991 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00040991
         (332 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACJ63313.1| RNA polymerase I large subunit [Drimys winteri]        129   3e-28
gb|ACJ63315.1| RNA polymerase I large subunit [Liriodendron tuli...   122   6e-26
gb|AAS55441.1| RNA polymerase I largest subunit [Nymphaea lotus]      119   3e-25
gb|ACJ63316.1| RNA polymerase I large subunit [Nymphaea odorata]      119   3e-25
gb|ACJ63314.1| RNA polymerase I large subunit [Illicium parviflo...   111   1e-22
gb|AAS55437.1| RNA polymerase I largest subunit [Taxus canadensis]    110   2e-22
gb|AAS55445.1| RNA polymerase I largest subunit [Ginkgo biloba]       110   3e-22
gb|ACJ63312.1| RNA polymerase I large subunit [Ceratophyllum dem...   109   3e-22
ref|XP_004967186.1| PREDICTED: DNA-directed RNA polymerase I sub...   108   6e-22
ref|XP_006656244.1| PREDICTED: DNA-directed RNA polymerase I sub...   108   1e-21
gb|EPS74252.1| hypothetical protein M569_00497, partial [Genlise...   108   1e-21
dbj|BAD35511.1| putative RNA polymerase A(I) large subunit [Oryz...   108   1e-21
ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I sub...   107   1e-21
ref|XP_006421454.1| hypothetical protein CICLE_v10004132mg [Citr...   107   1e-21
gb|ESW17626.1| hypothetical protein PHAVU_007G255400g [Phaseolus...   105   5e-21
ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   103   2e-20
ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I sub...   103   2e-20
gb|AAS55443.1| RNA polymerase I largest subunit [Cycas revoluta]      102   4e-20
ref|XP_002876429.1| hypothetical protein ARALYDRAFT_486216 [Arab...   102   4e-20
ref|NP_191325.1| nuclear RNA polymerase A1 [Arabidopsis thaliana...   102   4e-20

>gb|ACJ63313.1| RNA polymerase I large subunit [Drimys winteri]
          Length = 539

 Score =  129 bits (325), Expect = 3e-28
 Identities = 64/113 (56%), Positives = 87/113 (76%), Gaps = 3/113 (2%)
 Frame = -1

Query: 332 CLVKNLECLKVSYDYTVRDADGSVVQFIYGEDGVDVLKSSYISEFKMLSDNQKVVLQKFN 153
           CL+KNLE LKV YD+TVRDADGS++QF YGEDGVDV K+S+I+EFKML+ NQ +VL+K +
Sbjct: 400 CLIKNLESLKVCYDHTVRDADGSIIQFCYGEDGVDVHKTSFIAEFKMLAANQNIVLEKLS 459

Query: 152 DQMVDATLEKSNIFINKLPSSLKEGAIDF---ISKNQKRSPHQIKKKTFMKLM 3
            Q+ DA L KS+ +I +LP++L+  A DF   ++K ++ S H  K+K FM LM
Sbjct: 460 GQLEDAHLSKSDAYIKELPNALERKAKDFFCSLTKKKRHSLHLRKQKNFMNLM 512


>gb|ACJ63315.1| RNA polymerase I large subunit [Liriodendron tulipifera]
          Length = 558

 Score =  122 bits (305), Expect = 6e-26
 Identities = 64/113 (56%), Positives = 84/113 (74%), Gaps = 3/113 (2%)
 Frame = -1

Query: 332 CLVKNLECLKVSYDYTVRDADGSVVQFIYGEDGVDVLKSSYISEFKMLSDNQKVVLQKFN 153
           CL+KNLECL+V YD+TVRDADGSVVQF YGEDGVDV K+S+I+EFK L+ NQ+++L+K +
Sbjct: 423 CLIKNLECLRVCYDHTVRDADGSVVQFCYGEDGVDVHKTSFITEFKSLAQNQRIILEKHS 482

Query: 152 DQMVDATLEKSNIFINKLPSSLKEGAIDFI---SKNQKRSPHQIKKKTFMKLM 3
            Q  D     SN +IN+LP +L+  A DFI   SK ++ S H  K+K FM L+
Sbjct: 483 GQHED----PSNSYINELPDALRGKAKDFIGTLSKKKRDSFHLRKQKNFMNLV 531


>gb|AAS55441.1| RNA polymerase I largest subunit [Nymphaea lotus]
          Length = 544

 Score =  119 bits (299), Expect = 3e-25
 Identities = 65/114 (57%), Positives = 84/114 (73%), Gaps = 4/114 (3%)
 Frame = -1

Query: 332 CLVKNLECLKVSYDYTVRDADGSVVQFIYGEDGVDVLKSSYISEFKMLSDNQKVVLQKF- 156
           CLVKNLECLKV YDYTVRDADGS+VQF YGEDGVDVLKSS ++EFK+L+ NQ+++L++  
Sbjct: 404 CLVKNLECLKVCYDYTVRDADGSIVQFYYGEDGVDVLKSSCLTEFKILAANQEILLERLR 463

Query: 155 NDQMVDATLEKSNIFINKLPSSLKEGAIDFI---SKNQKRSPHQIKKKTFMKLM 3
           N   VD+ L +SN +I+ LP  L+  A +FI   S++QK      K K FM L+
Sbjct: 464 NGHSVDSDLLESNGYISSLPELLQRKAENFIRELSEDQKGELKLSKPKKFMNLV 517


>gb|ACJ63316.1| RNA polymerase I large subunit [Nymphaea odorata]
          Length = 542

 Score =  119 bits (299), Expect = 3e-25
 Identities = 65/114 (57%), Positives = 84/114 (73%), Gaps = 4/114 (3%)
 Frame = -1

Query: 332 CLVKNLECLKVSYDYTVRDADGSVVQFIYGEDGVDVLKSSYISEFKMLSDNQKVVLQKF- 156
           CLVKNLECLKV YDYTVRDADGS+VQF YGEDGVDVLKSS ++EFK+L+ NQ+++L++  
Sbjct: 402 CLVKNLECLKVCYDYTVRDADGSIVQFYYGEDGVDVLKSSCLTEFKILAANQEILLERLR 461

Query: 155 NDQMVDATLEKSNIFINKLPSSLKEGAIDFI---SKNQKRSPHQIKKKTFMKLM 3
           N   VD+ L +SN +I+ LP  L+  A +FI   S++QK      K K FM L+
Sbjct: 462 NGHSVDSDLLESNGYISSLPELLQRKAENFIRELSEDQKGELKLSKPKKFMNLV 515


>gb|ACJ63314.1| RNA polymerase I large subunit [Illicium parviflorum]
          Length = 540

 Score =  111 bits (277), Expect = 1e-22
 Identities = 59/114 (51%), Positives = 79/114 (69%), Gaps = 4/114 (3%)
 Frame = -1

Query: 332 CLVKNLECLKVSYDYTVRDADGSVVQFIYGEDGVDVLKSSYISEFKMLSDNQKVVLQKFN 153
           CL+KNLECLKV YDYTVRD+DGSV+QF YGEDG+DV+K+S +++FK+L+ N K+V QK  
Sbjct: 400 CLIKNLECLKVYYDYTVRDSDGSVIQFNYGEDGLDVMKTSCLTQFKVLAANNKLVSQKLG 459

Query: 152 DQMVDATLE-KSNIFINKLPSSLKEGAIDFIS--KNQKRSPHQIKKKT-FMKLM 3
               D +    S+ +I  LP +L+    DFIS    QKR    +KK+T F+ LM
Sbjct: 460 KDQFDGSKSLSSDSYIKDLPEALENKVQDFISGLSKQKRQSLNLKKRTGFLNLM 513


>gb|AAS55437.1| RNA polymerase I largest subunit [Taxus canadensis]
          Length = 545

 Score =  110 bits (275), Expect = 2e-22
 Identities = 54/121 (44%), Positives = 83/121 (68%), Gaps = 11/121 (9%)
 Frame = -1

Query: 332 CLVKNLECLKVSYDYTVRDADGSVVQFIYGEDGVDVLKSSYISEFKMLSDNQKVVLQKFN 153
           CL+KNLECLKV YDYT+RD+DGS++QF YGEDGVDV+K+S +++F +L+ NQK+V+Q+  
Sbjct: 398 CLIKNLECLKVYYDYTIRDSDGSIIQFYYGEDGVDVMKTSCLTQFDVLAANQKLVIQRLG 457

Query: 152 ----DQMVDATLEKSNIFI-----NKLPSSLKEGAIDFIS--KNQKRSPHQIKKKTFMKL 6
               D+++  + +K N  +     N LP +LK+ A+ FI     +KR    + ++ F+ L
Sbjct: 458 KDQFDELIHQSSKKGNSLVSDSHTNDLPEALKKKALGFIDSLSKEKRQSLNLDRRNFLNL 517

Query: 5   M 3
           M
Sbjct: 518 M 518


>gb|AAS55445.1| RNA polymerase I largest subunit [Ginkgo biloba]
          Length = 542

 Score =  110 bits (274), Expect = 3e-22
 Identities = 58/114 (50%), Positives = 79/114 (69%), Gaps = 4/114 (3%)
 Frame = -1

Query: 332 CLVKNLECLKVSYDYTVRDADGSVVQFIYGEDGVDVLKSSYISEFKMLSDNQKVVLQKFN 153
           CL+KNLECLKV YDYTVRD+DGSV+QF YGEDG+DV+K+S +++FK+L+ N K+V QK  
Sbjct: 402 CLIKNLECLKVYYDYTVRDSDGSVIQFNYGEDGLDVMKTSCLTQFKVLAANNKLVSQKLG 461

Query: 152 DQMVDATLE-KSNIFINKLPSSLKEGAIDFIS--KNQKRSPHQIKKKT-FMKLM 3
               D +    S+ +I  LP +L+    DFI+    QKR    +KK+T F+ LM
Sbjct: 462 KDQFDGSKSLSSDSYIKDLPEALENKVQDFINGLSKQKRQSLNLKKRTGFLNLM 515


>gb|ACJ63312.1| RNA polymerase I large subunit [Ceratophyllum demersum]
          Length = 538

 Score =  109 bits (273), Expect = 3e-22
 Identities = 55/112 (49%), Positives = 80/112 (71%), Gaps = 2/112 (1%)
 Frame = -1

Query: 332 CLVKNLECLKVSYDYTVRDADGSVVQFIYGEDGVDVLKSSYISEFKMLSDNQKVVLQKFN 153
           CL+K+LE LKV YD+TVRD+DGS+VQF YGEDGVDV K+S++++F+M++ NQ VV +K  
Sbjct: 400 CLIKSLESLKVCYDHTVRDSDGSIVQFTYGEDGVDVCKTSFLTQFEMIAANQDVVQEKLC 459

Query: 152 DQMVDATLEKSNIFINKLPSSLKEGAIDFIS--KNQKRSPHQIKKKTFMKLM 3
            +  DA L   + ++   PS L+E A D+++    +KR+   + KK FMKLM
Sbjct: 460 GKNKDARLHHFHGYLGAFPSGLEEKAKDYLNGLSKEKRTSLGLSKKGFMKLM 511


>ref|XP_004967186.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Setaria
            italica]
          Length = 1682

 Score =  108 bits (271), Expect = 6e-22
 Identities = 61/118 (51%), Positives = 78/118 (66%), Gaps = 8/118 (6%)
 Frame = -1

Query: 332  CLVKNLECLKVSYDYTVRDADGSVVQFIYGEDGVDVLKSSYISEFKMLSDNQKVVLQKFN 153
            CL+K LE LKVSYD+TVRD DGS+VQF YGEDGVDVLK+S++++FK L+DN+KVVL K  
Sbjct: 1021 CLIKCLESLKVSYDHTVRDVDGSIVQFCYGEDGVDVLKTSFLNKFKELADNKKVVLDKIK 1080

Query: 152  DQMVDATLEKSNIFINKLPSSLKEGAIDFIS--KNQKRSPHQ------IKKKTFMKLM 3
                +  L K N +I  LP  L   A +F+   K +K S  +      IKKK  MKL+
Sbjct: 1081 GHKQNQLLSKPNGYITTLPKKLVAEAKEFLKLLKEKKSSDIKKGLMCDIKKKGLMKLL 1138


>ref|XP_006656244.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Oryza
            brachyantha]
          Length = 1755

 Score =  108 bits (269), Expect = 1e-21
 Identities = 54/112 (48%), Positives = 78/112 (69%), Gaps = 2/112 (1%)
 Frame = -1

Query: 332  CLVKNLECLKVSYDYTVRDADGSVVQFIYGEDGVDVLKSSYISEFKMLSDNQKVVLQKFN 153
            CL+K+LE LKVSYD+TVRD DGS++QF YGEDGVDVLK+S++ +FK L+DN+K VL K +
Sbjct: 1089 CLIKSLESLKVSYDHTVRDVDGSIIQFCYGEDGVDVLKTSFLDKFKELADNRKAVLHKLD 1148

Query: 152  DQMVDATLEKSNIFINKLPSSLKEGAIDFISKNQKRS--PHQIKKKTFMKLM 3
                   L   N +I+KLP  L   A+ F+ + +K+    + I+++  MKL+
Sbjct: 1149 GLNDKHLLSNPNGYISKLPVKLIGSAMKFLKETEKKKLCRYDIEEEELMKLL 1200


>gb|EPS74252.1| hypothetical protein M569_00497, partial [Genlisea aurea]
          Length = 1626

 Score =  108 bits (269), Expect = 1e-21
 Identities = 54/97 (55%), Positives = 68/97 (70%)
 Frame = -1

Query: 332  CLVKNLECLKVSYDYTVRDADGSVVQFIYGEDGVDVLKSSYISEFKMLSDNQKVVLQKFN 153
            CLVKNLE LKV YDYTVRDADGS++QF YGEDGVD  K+S++  FK LS+NQ+ + QKF 
Sbjct: 987  CLVKNLESLKVGYDYTVRDADGSIIQFCYGEDGVDAHKTSFLKNFKALSNNQETIQQKFQ 1046

Query: 152  DQMVDATLEKSNIFINKLPSSLKEGAIDFISKNQKRS 42
            ++       + N +I KLP  L+E A+ FI K Q  S
Sbjct: 1047 NK------HQFNFYIKKLPEGLEEEAMHFIQKAQTLS 1077


>dbj|BAD35511.1| putative RNA polymerase A(I) large subunit [Oryza sativa Japonica
            Group]
          Length = 1748

 Score =  108 bits (269), Expect = 1e-21
 Identities = 55/112 (49%), Positives = 80/112 (71%), Gaps = 2/112 (1%)
 Frame = -1

Query: 332  CLVKNLECLKVSYDYTVRDADGSVVQFIYGEDGVDVLKSSYISE-FKMLSDNQKVVLQKF 156
            CL+K+LE LKVSYD+TVRD DGS++QF YGEDGVDVLK+S++ + F+ LSDN++ +L K 
Sbjct: 1080 CLIKSLESLKVSYDHTVRDVDGSIIQFCYGEDGVDVLKTSFLDDKFRELSDNRRALLGKL 1139

Query: 155  NDQMVDATLEKSNIFINKLPSSLKEGAIDFI-SKNQKRSPHQIKKKTFMKLM 3
            +       L   N +I++LP  L E A++F+ SK  ++  + IK+K  MKL+
Sbjct: 1140 DSHNDKHLLLNPNGYISELPEKLIENAMEFLKSKRNEKGRYDIKEKELMKLL 1191


>ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Citrus
            sinensis]
          Length = 1715

 Score =  107 bits (268), Expect = 1e-21
 Identities = 55/110 (50%), Positives = 80/110 (72%)
 Frame = -1

Query: 332  CLVKNLECLKVSYDYTVRDADGSVVQFIYGEDGVDVLKSSYISEFKMLSDNQKVVLQKFN 153
            CL+KNLECLK+SYDY+VRDADGS+VQF YGEDGVDV ++S+IS+F  L+ NQ+++ +K +
Sbjct: 1069 CLIKNLECLKISYDYSVRDADGSIVQFCYGEDGVDVHQTSFISKFDALAANQEMIYKKCS 1128

Query: 152  DQMVDATLEKSNIFINKLPSSLKEGAIDFISKNQKRSPHQIKKKTFMKLM 3
             Q     L+ SN +I +LP +LK+ A  F  K      +++ K+ F+KL+
Sbjct: 1129 GQ-----LDASNAYIMELPDALKDNAEKFADKFLS---NEMAKQDFLKLV 1170


>ref|XP_006421454.1| hypothetical protein CICLE_v10004132mg [Citrus clementina]
            gi|557523327|gb|ESR34694.1| hypothetical protein
            CICLE_v10004132mg [Citrus clementina]
          Length = 1715

 Score =  107 bits (268), Expect = 1e-21
 Identities = 55/110 (50%), Positives = 80/110 (72%)
 Frame = -1

Query: 332  CLVKNLECLKVSYDYTVRDADGSVVQFIYGEDGVDVLKSSYISEFKMLSDNQKVVLQKFN 153
            CL+KNLECLK+SYDY+VRDADGS+VQF YGEDGVDV ++S+IS+F  L+ NQ+++ +K +
Sbjct: 1069 CLIKNLECLKISYDYSVRDADGSIVQFCYGEDGVDVHQTSFISKFDALAANQEMIYKKCS 1128

Query: 152  DQMVDATLEKSNIFINKLPSSLKEGAIDFISKNQKRSPHQIKKKTFMKLM 3
             Q     L+ SN +I +LP +LK+ A  F  K      +++ K+ F+KL+
Sbjct: 1129 GQ-----LDASNAYIMELPDALKDNAEKFADKFLS---NEMAKQDFLKLV 1170


>gb|ESW17626.1| hypothetical protein PHAVU_007G255400g [Phaseolus vulgaris]
          Length = 1637

 Score =  105 bits (263), Expect = 5e-21
 Identities = 57/111 (51%), Positives = 80/111 (72%), Gaps = 1/111 (0%)
 Frame = -1

Query: 332  CLVKNLECLKVSYDYTVRDADGSVVQFIYGEDGVDVLKSSYISEFKMLSDNQKVVLQKFN 153
            CL+KNLECLKV YD+TVRDADGS++QF YGEDGVDV  +S+I++F+ LS N+++V     
Sbjct: 1002 CLMKNLECLKVCYDHTVRDADGSIIQFHYGEDGVDVHHTSFINKFEALSTNKELVYGNCC 1061

Query: 152  DQMVDATLEKSNIFINKLPSSLKEGAIDFISKNQK-RSPHQIKKKTFMKLM 3
             Q     L++S+ +INKLP +LKE A +F   + K R+   +K+  F+KLM
Sbjct: 1062 RQ-----LDRSSPYINKLPDALKEKAENFFRDSLKQRNLGSLKRAEFLKLM 1107


>ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit
            RPA1-like [Cucumis sativus]
          Length = 1652

 Score =  103 bits (257), Expect = 2e-20
 Identities = 53/111 (47%), Positives = 81/111 (72%), Gaps = 1/111 (0%)
 Frame = -1

Query: 332  CLVKNLECLKVSYDYTVRDADGSVVQFIYGEDGVDVLKSSYISEFKMLSDNQKVVLQKFN 153
            CL+KNLE LK+ YD+TVRDADGSV+QF YGEDGVDV K+++I++F+ L+ NQ ++ +  +
Sbjct: 1012 CLIKNLESLKICYDHTVRDADGSVIQFQYGEDGVDVHKTAFITKFEALAANQDMLYENSH 1071

Query: 152  DQMVDATLEKSNIFINKLPSSLKE-GAIDFISKNQKRSPHQIKKKTFMKLM 3
             Q     L K N+FIN+LPS+L+E G   + S ++ + P  + K+ F++L+
Sbjct: 1072 HQ-----LGKYNVFINELPSALREKGEFIYNSLSKDKVPGLVLKEDFIRLL 1117


>ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Cucumis
            sativus]
          Length = 1650

 Score =  103 bits (257), Expect = 2e-20
 Identities = 53/111 (47%), Positives = 81/111 (72%), Gaps = 1/111 (0%)
 Frame = -1

Query: 332  CLVKNLECLKVSYDYTVRDADGSVVQFIYGEDGVDVLKSSYISEFKMLSDNQKVVLQKFN 153
            CL+KNLE LK+ YD+TVRDADGSV+QF YGEDGVDV K+++I++F+ L+ NQ ++ +  +
Sbjct: 1009 CLIKNLESLKICYDHTVRDADGSVIQFQYGEDGVDVHKTAFITKFEALAANQDMLYENSH 1068

Query: 152  DQMVDATLEKSNIFINKLPSSLKE-GAIDFISKNQKRSPHQIKKKTFMKLM 3
             Q     L K N+FIN+LPS+L+E G   + S ++ + P  + K+ F++L+
Sbjct: 1069 HQ-----LGKYNVFINELPSALREKGEFIYNSLSKDKVPGLVLKEDFIRLL 1114


>gb|AAS55443.1| RNA polymerase I largest subunit [Cycas revoluta]
          Length = 547

 Score =  102 bits (255), Expect = 4e-20
 Identities = 58/121 (47%), Positives = 79/121 (65%), Gaps = 11/121 (9%)
 Frame = -1

Query: 332 CLVKNLECLKVSYDYTVRDADGSVVQFIYGEDGVDVLKSSYISEFKMLSDNQKVVLQK-- 159
           CL+KNLECLKV YDYTVRD+DGSV+QF YGEDG+DV+K+S ++EFK+L+ NQK+V ++  
Sbjct: 402 CLIKNLECLKVHYDYTVRDSDGSVIQFTYGEDGLDVMKTSCLTEFKVLAANQKLVSRRLG 461

Query: 158 ------FNDQMVDATLEKSNIFINKLPSSLKEGAIDFI---SKNQKRSPHQIKKKTFMKL 6
                  N Q  D   + S+ +I  LP + +     FI   SK +KRS    K+  F+ L
Sbjct: 462 GGNFTELNCQYSDK--KSSDSYIKSLPEAFENKLQTFINGLSKKKKRSLKLRKQNKFLNL 519

Query: 5   M 3
           M
Sbjct: 520 M 520


>ref|XP_002876429.1| hypothetical protein ARALYDRAFT_486216 [Arabidopsis lyrata subsp.
            lyrata] gi|297322267|gb|EFH52688.1| hypothetical protein
            ARALYDRAFT_486216 [Arabidopsis lyrata subsp. lyrata]
          Length = 1678

 Score =  102 bits (255), Expect = 4e-20
 Identities = 54/113 (47%), Positives = 80/113 (70%), Gaps = 3/113 (2%)
 Frame = -1

Query: 332  CLVKNLECLKVSYDYTVRDADGSVVQFIYGEDGVDVLKSSYISEFKMLSDNQKVVLQKFN 153
            CL+KNLE LK++YD TVRDADGS++QF YGEDGVDV +SS+I +FK L+ NQ +VLQ+ +
Sbjct: 1037 CLMKNLESLKINYDCTVRDADGSIIQFQYGEDGVDVHRSSFIEKFKELAINQDMVLQRCS 1096

Query: 152  DQMVDATLEKSNIFINKLPSSLKEGAIDFIS---KNQKRSPHQIKKKTFMKLM 3
            + M    L  +N +I+ LP SLK GA  F+     N++ +   ++++  +KL+
Sbjct: 1097 EDM----LSGANSYISDLPISLKNGAEKFVEAMPMNERIASKFVRQEELLKLV 1145


>ref|NP_191325.1| nuclear RNA polymerase A1 [Arabidopsis thaliana]
            gi|4678281|emb|CAB41189.1| DNA-directed RNA polymerase I
            190K chain-like protein [Arabidopsis thaliana]
            gi|332646163|gb|AEE79684.1| nuclear RNA polymerase A1
            [Arabidopsis thaliana]
          Length = 1670

 Score =  102 bits (255), Expect = 4e-20
 Identities = 55/113 (48%), Positives = 81/113 (71%), Gaps = 3/113 (2%)
 Frame = -1

Query: 332  CLVKNLECLKVSYDYTVRDADGSVVQFIYGEDGVDVLKSSYISEFKMLSDNQKVVLQKFN 153
            CL+KNLE LKV+YD TVRDADGS++QF YGEDGVDV +SS+I +FK L+ NQ +VLQK +
Sbjct: 1035 CLMKNLESLKVNYDCTVRDADGSIIQFQYGEDGVDVHRSSFIEKFKELTINQDMVLQKCS 1094

Query: 152  DQMVDATLEKSNIFINKLPSSLKEGAIDFIS---KNQKRSPHQIKKKTFMKLM 3
            + M    L  ++ +I+ LP SLK+GA  F+     N++ +   ++++  +KL+
Sbjct: 1095 EDM----LSGASSYISDLPISLKKGAEKFVEAMPMNERIASKFVRQEELLKLV 1143


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