BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00040921
         (345 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOX91989.1| RING/U-box superfamily protein, putative [Theobro...    81   2e-13
ref|XP_004964951.1| PREDICTED: E3 ubiquitin-protein ligase ATL31...    77   2e-12
gb|AFW76733.1| putative RING zinc finger domain superfamily prot...    77   2e-12
gb|ACN37076.1| unknown [Zea mays]                                      76   5e-12
ref|NP_001142103.1| uncharacterized LOC100274267 precursor [Zea ...    76   5e-12
tpg|DAA61870.1| TPA: putative RING zinc finger domain superfamil...    75   7e-12
dbj|BAJ85025.1| predicted protein [Hordeum vulgare subsp. vulgare]     74   2e-11
ref|XP_003555593.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...    74   2e-11
ref|XP_004973712.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...    74   3e-11
dbj|BAD36097.1| putative RING-H2 zinc finger protein [Oryza sati...    73   4e-11
gb|AEJ07912.1| ring-H2 zinc finger protein, partial [Zea luxurians]    73   4e-11
ref|XP_003578264.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...    73   4e-11
gb|EAZ36286.1| hypothetical protein OsJ_20608 [Oryza sativa Japo...    73   4e-11
gb|EAZ00171.1| hypothetical protein OsI_22177 [Oryza sativa Indi...    73   4e-11
gb|AAO45753.1| RING/c3HC4/PHD zinc finger-like protein [Cucumis ...    73   4e-11
ref|XP_004957082.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...    72   6e-11
ref|XP_004139190.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...    72   6e-11
ref|XP_002462520.1| hypothetical protein SORBIDRAFT_02g027200 [S...    72   8e-11
ref|XP_004495745.1| PREDICTED: DNA excision repair protein ERCC-...    72   1e-10
ref|XP_004289484.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...    72   1e-10

>gb|EOX91989.1| RING/U-box superfamily protein, putative [Theobroma cacao]
          Length = 354

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 45/104 (43%), Positives = 63/104 (60%)
 Frame = +3

Query: 27  PNNGNLYGDYNLPVNPVIVALVIAXXXXXXXXXXXSVYLRRCGGRSSGQLPSSTAASAPG 206
           P  G+ YG Y+   +P +  +V+            S+Y+R+C   ++   PS+ AA++ G
Sbjct: 25  PPRGDSYGLYS-HFDPSMAIVVMVLVCAFFFVGFLSIYIRQCNESNAIATPSAVAAASSG 83

Query: 207 ERASRLGLDPAVLDSFPTMSYSEAKDHRRGKGGALECAVCLSEF 338
           ER+ R GLD AV++SFP   YS  KD + GK GALECAVCLSEF
Sbjct: 84  ERSRRKGLDSAVIESFPVFIYSCVKDLKMGK-GALECAVCLSEF 126


>ref|XP_004964951.1| PREDICTED: E3 ubiquitin-protein ligase ATL31-like [Setaria italica]
          Length = 438

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 54/119 (45%), Positives = 66/119 (55%), Gaps = 11/119 (9%)
 Frame = +3

Query: 15  SSNTPNNGNLYGDYNLPVNPV-----IVALVIAXXXXXXXXXXXSVYLRRCG-GRSSG-- 170
           S +  N G   G Y+    P      +V L++A           SVY+RRCG G SSG  
Sbjct: 33  SRDKDNGGGGGGGYSRQTQPPGFSAPMVVLLVALIAAFFFIGFFSVYMRRCGRGASSGGP 92

Query: 171 QLPSST--AASAPGERASRLGLDPAVLDSFPTMSYSEAKDHR-RGKGGALECAVCLSEF 338
            +P+S   A S   ER  + GLDP V+ SFPTM Y+EAK+ R  GK  ALECAVCLSEF
Sbjct: 93  AIPASALLALSRQEERNRQRGLDPTVVASFPTMRYAEAKELRVGGKDAALECAVCLSEF 151


>gb|AFW76733.1| putative RING zinc finger domain superfamily protein [Zea mays]
          Length = 421

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 53/122 (43%), Positives = 70/122 (57%), Gaps = 10/122 (8%)
 Frame = +3

Query: 3   AGQSSSNTPNNGNLYGDYNLPV-----NPVIVALVIAXXXXXXXXXXXSVYLRRCG-GRS 164
           A QS S   +NG   G   +P      +  +V L++A           SVY+RRCG G S
Sbjct: 30  AQQSPSRDKDNGGGGGGGGMPAQTPSFSAPMVVLLVALIAAFFFIGFFSVYMRRCGRGAS 89

Query: 165 SGQ-LPSST--AASAPGERASRLGLDPAVLDSFPTMSYSEAKDHR-RGKGGALECAVCLS 332
           +G  +P++   A S   ER  + GLDPAV+ SFPTM Y++A++ R  GK  ALECAVCLS
Sbjct: 90  AGPVIPAAALLALSRQEERNQQRGLDPAVVASFPTMRYADARELRVGGKDAALECAVCLS 149

Query: 333 EF 338
           EF
Sbjct: 150 EF 151


>gb|ACN37076.1| unknown [Zea mays]
          Length = 233

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 50/116 (43%), Positives = 64/116 (55%), Gaps = 5/116 (4%)
 Frame = +3

Query: 6   GQSSSNTPNNGNLYGDYNLPVNPVIVALVIAXXXXXXXXXXXSVYLRRC-GGRSSGQLPS 182
           GQ     P  G  Y     P   +++ ++IA           S+Y+R C G  SSG   S
Sbjct: 33  GQQQQPGPAGGAYYSQSFSPSMAIVIVVLIAAFFFLGFF---SIYVRHCYGDGSSGY--S 87

Query: 183 STAASAPGERASRL----GLDPAVLDSFPTMSYSEAKDHRRGKGGALECAVCLSEF 338
           +    APG  A+R     GLD AVL+SFPTM+Y++ K H+ GK GALECAVCLSEF
Sbjct: 88  ANRPPAPGGAAARSRRQRGLDEAVLESFPTMAYADVKAHKAGK-GALECAVCLSEF 142


>ref|NP_001142103.1| uncharacterized LOC100274267 precursor [Zea mays]
           gi|194707124|gb|ACF87646.1| unknown [Zea mays]
           gi|414589721|tpg|DAA40292.1| TPA: putative RING zinc
           finger domain superfamily protein [Zea mays]
          Length = 393

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 50/116 (43%), Positives = 64/116 (55%), Gaps = 5/116 (4%)
 Frame = +3

Query: 6   GQSSSNTPNNGNLYGDYNLPVNPVIVALVIAXXXXXXXXXXXSVYLRRC-GGRSSGQLPS 182
           GQ     P  G  Y     P   +++ ++IA           S+Y+R C G  SSG   S
Sbjct: 33  GQQQQPGPAGGAYYSQSFSPSMAIVIVVLIAAFFFLGFF---SIYVRHCYGDGSSGY--S 87

Query: 183 STAASAPGERASRL----GLDPAVLDSFPTMSYSEAKDHRRGKGGALECAVCLSEF 338
           +    APG  A+R     GLD AVL+SFPTM+Y++ K H+ GK GALECAVCLSEF
Sbjct: 88  ANRPPAPGGAAARSRRQRGLDEAVLESFPTMAYADVKAHKAGK-GALECAVCLSEF 142


>tpg|DAA61870.1| TPA: putative RING zinc finger domain superfamily protein [Zea
           mays]
          Length = 404

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 42/97 (43%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
 Frame = +3

Query: 54  YNLPVNPVIVALVIAXXXXXXXXXXXSVYLRRCGGRSSGQLPSSTAASAPGERASRL--G 227
           Y+   NP +  +++            SVY+R C G  S    +S A      R+ R   G
Sbjct: 42  YSRSFNPSMAIVIVVLIAAFFFLGFFSVYVRHCYGDGSSGYSASPAPGGAAARSRRQQRG 101

Query: 228 LDPAVLDSFPTMSYSEAKDHRRGKGGALECAVCLSEF 338
           LD AVL+SFPTM+Y++ K H+ GK GALECAVCLSEF
Sbjct: 102 LDSAVLESFPTMAYADVKAHKAGK-GALECAVCLSEF 137


>dbj|BAJ85025.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 397

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 42/112 (37%), Positives = 60/112 (53%), Gaps = 1/112 (0%)
 Frame = +3

Query: 6   GQSSSNTPNNGNLYGDYNLPVNPVIVALVIAXXXXXXXXXXXSVYLRRC-GGRSSGQLPS 182
           G +  N P  G  Y  Y    +P +  +++            SVY+R C G  +      
Sbjct: 35  GAAQQNPPPPGGQY--YTTNFSPSMAIVIVVLIAAFFFLGFFSVYVRHCYGDNTYAATTL 92

Query: 183 STAASAPGERASRLGLDPAVLDSFPTMSYSEAKDHRRGKGGALECAVCLSEF 338
              A+A   R  + GLDPAVL++FPTM+Y++ K+H+  K GALECAVC+SEF
Sbjct: 93  PIGAAAARSRRQQRGLDPAVLETFPTMAYADVKEHKAVK-GALECAVCISEF 143


>ref|XP_003555593.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Glycine max]
          Length = 336

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 40/102 (39%), Positives = 55/102 (53%)
 Frame = +3

Query: 33  NGNLYGDYNLPVNPVIVALVIAXXXXXXXXXXXSVYLRRCGGRSSGQLPSSTAASAPGER 212
           +GN    Y    +P +  +++            S+Y+R C G  S  + +  AAS    R
Sbjct: 26  HGNQNESYYNKFSPSMAIIIVILIAALFLMGFFSIYIRHCSGSPSASIRNLPAASGRSRR 85

Query: 213 ASRLGLDPAVLDSFPTMSYSEAKDHRRGKGGALECAVCLSEF 338
            SR GLD AV+D+FPT+ YS    H+ GK G LECAVCL+EF
Sbjct: 86  GSR-GLDQAVIDTFPTLEYSTVNIHKLGK-GTLECAVCLNEF 125


>ref|XP_004973712.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Setaria italica]
          Length = 404

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 47/123 (38%), Positives = 62/123 (50%), Gaps = 11/123 (8%)
 Frame = +3

Query: 3   AGQSSSNTPNNGNLYGDYNLPVNPVIVALVIAXXXXXXXXXXXSVYLRRCGGR------- 161
           A Q     P  G  Y D     NP +  +++            S+YLRRC G        
Sbjct: 28  AQQGPRTGPGPGPSYFDPK-NFNPSMAIVMVVLVTAFFLLGFFSIYLRRCAGPPLGGPDD 86

Query: 162 ----SSGQLPSSTAASAPGERASRLGLDPAVLDSFPTMSYSEAKDHRRGKGGALECAVCL 329
               + G+ P   A ++   R +  GLD AVL+SFPTM+Y++ K H+ GK GALECAVCL
Sbjct: 87  DGYPAGGRRPLGIAYASRSSRRAARGLDRAVLESFPTMAYADVKAHKVGK-GALECAVCL 145

Query: 330 SEF 338
           SEF
Sbjct: 146 SEF 148


>dbj|BAD36097.1| putative RING-H2 zinc finger protein [Oryza sativa Japonica Group]
          Length = 442

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 44/93 (47%), Positives = 60/93 (64%), Gaps = 6/93 (6%)
 Frame = +3

Query: 78  IVALVIAXXXXXXXXXXXSVYLRRCGGRSSG--QLPSST-AASAPGERASRL--GLDPAV 242
           +V L++A           S+Y+RRCGG +S    +P++  AA +  E+ SR   GLDPAV
Sbjct: 69  MVVLLVALIAAFFFIGFFSIYIRRCGGEASTGPTIPAAALAALSRQEQRSRRQRGLDPAV 128

Query: 243 LDSFPTMSYSEAKDHR-RGKGGALECAVCLSEF 338
           ++SFPTM Y+EA++ R  GK   LECAVCLSEF
Sbjct: 129 VESFPTMKYAEARELRDGGKDAVLECAVCLSEF 161


>gb|AEJ07912.1| ring-H2 zinc finger protein, partial [Zea luxurians]
          Length = 299

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 45/92 (48%), Positives = 59/92 (64%), Gaps = 5/92 (5%)
 Frame = +3

Query: 78  IVALVIAXXXXXXXXXXXSVYLRRCG-GRSSGQ-LPSST--AASAPGERASRLGLDPAVL 245
           +V L++A           SVY+RRCG G SSG  +P++   A S   +R  + GLDPAV+
Sbjct: 1   MVVLLVALIAAFFFISFFSVYMRRCGRGASSGPVIPAAALLALSRQEQRNQQRGLDPAVV 60

Query: 246 DSFPTMSYSEAKDHR-RGKGGALECAVCLSEF 338
            SFPTM Y++A++ R  GK  ALECAVCLSEF
Sbjct: 61  ASFPTMRYADARELRVGGKDAALECAVCLSEF 92


>ref|XP_003578264.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Brachypodium
           distachyon]
          Length = 399

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 46/116 (39%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
 Frame = +3

Query: 3   AGQSSSNTPNNGNLYGDYNLPVNPVIVALVIAXXXXXXXXXXXSVYLRRCGGRSSGQ--- 173
           A Q  S+ P  G+    Y    +P +  +++            SVY+R C G  SG    
Sbjct: 28  AAQQKSSPPLPGD--PRYATQFSPSMAIVIVVLIAAFFFLGFFSVYIRHCYGDRSGYSVN 85

Query: 174 -LPSSTAASAPGERASRLGLDPAVLDSFPTMSYSEAKDHRRGKGGALECAVCLSEF 338
            LP+  AA +   R  + GLD AVL++FPTM+Y++ K+H+  K GALECAVCLSEF
Sbjct: 86  PLPAGNAARS---RRQQRGLDKAVLETFPTMAYADVKEHKSVK-GALECAVCLSEF 137


>gb|EAZ36286.1| hypothetical protein OsJ_20608 [Oryza sativa Japonica Group]
          Length = 348

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 44/93 (47%), Positives = 60/93 (64%), Gaps = 6/93 (6%)
 Frame = +3

Query: 78  IVALVIAXXXXXXXXXXXSVYLRRCGGRSSG--QLPSST-AASAPGERASRL--GLDPAV 242
           +V L++A           S+Y+RRCGG +S    +P++  AA +  E+ SR   GLDPAV
Sbjct: 12  MVVLLVALIAAFFFIGFFSIYIRRCGGEASTGPTIPAAALAALSRQEQRSRRQRGLDPAV 71

Query: 243 LDSFPTMSYSEAKDHR-RGKGGALECAVCLSEF 338
           ++SFPTM Y+EA++ R  GK   LECAVCLSEF
Sbjct: 72  VESFPTMKYAEARELRDGGKDAVLECAVCLSEF 104


>gb|EAZ00171.1| hypothetical protein OsI_22177 [Oryza sativa Indica Group]
          Length = 449

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 44/93 (47%), Positives = 60/93 (64%), Gaps = 6/93 (6%)
 Frame = +3

Query: 78  IVALVIAXXXXXXXXXXXSVYLRRCGGRSSG--QLPSST-AASAPGERASRL--GLDPAV 242
           +V L++A           S+Y+RRCGG +S    +P++  AA +  E+ SR   GLDPAV
Sbjct: 69  MVVLLVALIAAFFFIGFFSIYIRRCGGEASTGPTIPAAALAALSRQEQRSRRQRGLDPAV 128

Query: 243 LDSFPTMSYSEAKDHR-RGKGGALECAVCLSEF 338
           ++SFPTM Y+EA++ R  GK   LECAVCLSEF
Sbjct: 129 VESFPTMKYAEARELRDGGKDAVLECAVCLSEF 161


>gb|AAO45753.1| RING/c3HC4/PHD zinc finger-like protein [Cucumis melo subsp. melo]
          Length = 379

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 37/69 (53%), Positives = 49/69 (71%)
 Frame = +3

Query: 132 SVYLRRCGGRSSGQLPSSTAASAPGERASRLGLDPAVLDSFPTMSYSEAKDHRRGKGGAL 311
           SVY+R C    S  +   TAA+    RA+R GLDPAV+++FPT+ YS+ K+H+ GK  AL
Sbjct: 65  SVYIRHCNDSPSNTVRPITAAAGRSRRATR-GLDPAVIETFPTLIYSDVKEHKIGK-SAL 122

Query: 312 ECAVCLSEF 338
           ECAVCL+EF
Sbjct: 123 ECAVCLNEF 131


>ref|XP_004957082.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Setaria italica]
          Length = 395

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 46/111 (41%), Positives = 64/111 (57%), Gaps = 1/111 (0%)
 Frame = +3

Query: 9   QSSSNTPNNGNLYGDYNLPVNPVIVALVIAXXXXXXXXXXXSVYLRRCGGRSSGQLPSST 188
           Q++  TP     Y +++  +  VIV L+ A           S+Y+R C G  S    +S 
Sbjct: 33  QTNGQTP-----YTNFSPSMAIVIVVLIAAFFFLGFF----SIYVRHCYGDGSSGYSASP 83

Query: 189 AASAPGERASRL-GLDPAVLDSFPTMSYSEAKDHRRGKGGALECAVCLSEF 338
           A +    R+ R  GLD AVL++FPTM+Y++ K H+ GK GALECAVCLSEF
Sbjct: 84  APNGAAARSRRQRGLDAAVLETFPTMAYADVKAHKAGK-GALECAVCLSEF 133


>ref|XP_004139190.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Cucumis sativus]
           gi|449518671|ref|XP_004166360.1| PREDICTED: E3
           ubiquitin-protein ligase ATL6-like [Cucumis sativus]
          Length = 379

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 39/109 (35%), Positives = 60/109 (55%)
 Frame = +3

Query: 12  SSSNTPNNGNLYGDYNLPVNPVIVALVIAXXXXXXXXXXXSVYLRRCGGRSSGQLPSSTA 191
           S+ + P+       Y   ++  +  +++            SVY+R C    S  +   T 
Sbjct: 25  SAQSQPSPDPRSDPYQYRLSGSMAVIIVILIAALFFMAFFSVYIRHCNDSQSNTIRPITV 84

Query: 192 ASAPGERASRLGLDPAVLDSFPTMSYSEAKDHRRGKGGALECAVCLSEF 338
           A+    RA+R GLDPAV+++FPT+ YS+ K+H+ GK  ALECAVCL+EF
Sbjct: 85  AAGRSRRATR-GLDPAVIETFPTLIYSDVKEHKIGK-SALECAVCLNEF 131


>ref|XP_002462520.1| hypothetical protein SORBIDRAFT_02g027200 [Sorghum bicolor]
           gi|241925897|gb|EER99041.1| hypothetical protein
           SORBIDRAFT_02g027200 [Sorghum bicolor]
          Length = 412

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 40/93 (43%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
 Frame = +3

Query: 69  NPVIVALVIAXXXXXXXXXXXSVYLRRC--GGRSSGQL-PSSTAASAPGERASRLGLDPA 239
           +P +  +++            S+Y+R C  GG SS    P+    +A   R  + GLD A
Sbjct: 50  SPSMAIVIVVLIAAFFFLGFFSIYVRHCYAGGDSSNSTDPAGPNGAAARSRRQQRGLDAA 109

Query: 240 VLDSFPTMSYSEAKDHRRGKGGALECAVCLSEF 338
           VL+SFPTM+Y++ K H+ GK GALECAVCLSEF
Sbjct: 110 VLESFPTMAYADVKAHKAGK-GALECAVCLSEF 141


>ref|XP_004495745.1| PREDICTED: DNA excision repair protein ERCC-1-like [Cicer
           arietinum]
          Length = 652

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 39/110 (35%), Positives = 61/110 (55%)
 Frame = +3

Query: 9   QSSSNTPNNGNLYGDYNLPVNPVIVALVIAXXXXXXXXXXXSVYLRRCGGRSSGQLPSST 188
           Q+S++ PN+      Y   V+P +  +++            S+Y+R+C    S  + +  
Sbjct: 34  QTSNDNPNDS-----YYNRVSPSMAIIIVILIAALFLMGFFSIYIRQCADSPSNSIRNIA 88

Query: 189 AASAPGERASRLGLDPAVLDSFPTMSYSEAKDHRRGKGGALECAVCLSEF 338
             +    R +R GLDP+V+++FPT  YS  K H+ GK GALECAVCL+EF
Sbjct: 89  GVTGRSRRGAR-GLDPSVIETFPTFEYSVVKIHKIGK-GALECAVCLNEF 136


>ref|XP_004289484.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Fragaria vesca
           subsp. vesca]
          Length = 377

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 50/112 (44%), Positives = 59/112 (52%), Gaps = 2/112 (1%)
 Frame = +3

Query: 9   QSSSNTPNNGNLY-GDYNLPVNPVIVALVIAXXXXXXXXXXXSVYLRRCGGRSSGQLPSS 185
           QS      NG  Y  ++N  +  VIV LV A           S+Y+RRC          S
Sbjct: 24  QSPGPLQTNGYAYLANFNSSMAMVIVFLVCAFFLVGFF----SIYIRRCAETHIANAGGS 79

Query: 186 T-AASAPGERASRLGLDPAVLDSFPTMSYSEAKDHRRGKGGALECAVCLSEF 338
             AA A G  A R GLDPAV++ FP   YS+ KD + GK GALECAVCLSEF
Sbjct: 80  LGAAGAIGVAARRRGLDPAVIEKFPMFVYSDVKDLKIGK-GALECAVCLSEF 130