BLASTX nr result
ID: Zingiber23_contig00040853
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00040853
(497 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004960336.1| PREDICTED: DNA repair protein RAD51 homolog ... 82 1e-13
ref|XP_002440505.1| hypothetical protein SORBIDRAFT_09g002090 [S... 80 2e-13
ref|XP_006653986.1| PREDICTED: DNA repair protein RAD51 homolog ... 80 3e-13
ref|NP_001132052.1| uncharacterized protein LOC100193464 [Zea ma... 79 8e-13
gb|EMS51697.1| DNA repair protein RAD51-like protein 2 [Triticum... 75 7e-12
ref|XP_003566651.1| PREDICTED: DNA repair protein RAD51 homolog ... 75 7e-12
ref|NP_001054500.1| Os05g0121700 [Oryza sativa Japonica Group] g... 75 9e-12
gb|AFW82782.1| hypothetical protein ZEAMMB73_481254 [Zea mays] 74 2e-11
gb|EOY34263.1| DNA repair (Rad51) family protein isoform 2 [Theo... 74 3e-11
gb|EOY34262.1| DNA repair (Rad51) family protein isoform 1 [Theo... 74 3e-11
ref|XP_004487150.1| PREDICTED: DNA repair protein RAD51 homolog ... 72 6e-11
ref|XP_004294689.1| PREDICTED: DNA repair protein RAD51 homolog ... 70 3e-10
ref|XP_003597136.1| DNA repair protein RAD51-like protein [Medic... 70 3e-10
ref|XP_004251280.1| PREDICTED: DNA repair protein RAD51 homolog ... 70 4e-10
ref|XP_006597304.1| PREDICTED: DNA repair protein RAD51 homolog ... 69 5e-10
ref|XP_003547508.1| PREDICTED: DNA repair protein RAD51 homolog ... 69 5e-10
ref|XP_006828326.1| hypothetical protein AMTR_s00023p00243610 [A... 69 7e-10
ref|XP_002530246.1| conserved hypothetical protein [Ricinus comm... 67 2e-09
ref|XP_004170620.1| PREDICTED: DNA repair protein RAD51 homolog ... 66 4e-09
ref|XP_004149537.1| PREDICTED: DNA repair protein RAD51 homolog ... 66 4e-09
>ref|XP_004960336.1| PREDICTED: DNA repair protein RAD51 homolog 2-like [Setaria
italica]
Length = 364
Score = 81.6 bits (200), Expect = 1e-13
Identities = 36/53 (67%), Positives = 48/53 (90%)
Frame = -1
Query: 497 GQRFIKISKSPTSPAIAFPFLVKSSGIALLSDEGLEVTGSEMSTIRCEGLNVL 339
G RF+K++KSP SPA+AFPF+V+SSGI LLSDEG++VTG E+++IRC+G NVL
Sbjct: 310 GHRFMKVAKSPMSPAVAFPFVVESSGITLLSDEGIDVTGPEITSIRCQGQNVL 362
>ref|XP_002440505.1| hypothetical protein SORBIDRAFT_09g002090 [Sorghum bicolor]
gi|241945790|gb|EES18935.1| hypothetical protein
SORBIDRAFT_09g002090 [Sorghum bicolor]
Length = 364
Score = 80.5 bits (197), Expect = 2e-13
Identities = 36/53 (67%), Positives = 47/53 (88%)
Frame = -1
Query: 497 GQRFIKISKSPTSPAIAFPFLVKSSGIALLSDEGLEVTGSEMSTIRCEGLNVL 339
G RFIK++KSP SPA+AFPF+V+SSGI LLSDE ++VTG E+++IRC+G NVL
Sbjct: 310 GHRFIKVAKSPMSPAVAFPFVVESSGITLLSDESIDVTGPEITSIRCQGQNVL 362
>ref|XP_006653986.1| PREDICTED: DNA repair protein RAD51 homolog 2-like [Oryza
brachyantha]
Length = 363
Score = 80.1 bits (196), Expect = 3e-13
Identities = 36/55 (65%), Positives = 47/55 (85%)
Frame = -1
Query: 497 GQRFIKISKSPTSPAIAFPFLVKSSGIALLSDEGLEVTGSEMSTIRCEGLNVLVE 333
G RFIK++KSP SPA+AFPF V+SSGI LLSDEG++V G E+++IRC+G NVL +
Sbjct: 309 GHRFIKVAKSPMSPAVAFPFTVESSGIVLLSDEGIDVPGPEITSIRCQGENVLAQ 363
>ref|NP_001132052.1| uncharacterized protein LOC100193464 [Zea mays]
gi|194693306|gb|ACF80737.1| unknown [Zea mays]
Length = 363
Score = 78.6 bits (192), Expect = 8e-13
Identities = 35/53 (66%), Positives = 46/53 (86%)
Frame = -1
Query: 497 GQRFIKISKSPTSPAIAFPFLVKSSGIALLSDEGLEVTGSEMSTIRCEGLNVL 339
G RFIK++KSP SPA+AFPF V+SSGI LLSDE ++VTG ++++IRC+G NVL
Sbjct: 310 GHRFIKVAKSPMSPAVAFPFAVESSGITLLSDESIDVTGPDITSIRCQGQNVL 362
>gb|EMS51697.1| DNA repair protein RAD51-like protein 2 [Triticum urartu]
Length = 327
Score = 75.5 bits (184), Expect = 7e-12
Identities = 32/48 (66%), Positives = 45/48 (93%)
Frame = -1
Query: 497 GQRFIKISKSPTSPAIAFPFLVKSSGIALLSDEGLEVTGSEMSTIRCE 354
GQRFIK++KSP SPA+AFPF+V+SSGI LL+DEG++V+G E+++IRC+
Sbjct: 272 GQRFIKVAKSPMSPAVAFPFIVESSGITLLNDEGIDVSGPEITSIRCQ 319
>ref|XP_003566651.1| PREDICTED: DNA repair protein RAD51 homolog 2-like [Brachypodium
distachyon]
Length = 364
Score = 75.5 bits (184), Expect = 7e-12
Identities = 33/53 (62%), Positives = 46/53 (86%)
Frame = -1
Query: 497 GQRFIKISKSPTSPAIAFPFLVKSSGIALLSDEGLEVTGSEMSTIRCEGLNVL 339
G RFIK++KSP SPA+ FPF+V+SSGI LLSDEG++V+G E+++IR +G N+L
Sbjct: 310 GHRFIKVAKSPMSPAVEFPFIVESSGITLLSDEGIDVSGPEITSIRLQGQNIL 362
>ref|NP_001054500.1| Os05g0121700 [Oryza sativa Japonica Group]
gi|54287477|gb|AAV31221.1| putative DNA repair protein
RAD51 [Oryza sativa Japonica Group]
gi|113578051|dbj|BAF16414.1| Os05g0121700 [Oryza sativa
Japonica Group] gi|215741250|dbj|BAG97745.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|215741600|dbj|BAG98095.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|218195995|gb|EEC78422.1| hypothetical protein
OsI_18249 [Oryza sativa Indica Group]
gi|222630019|gb|EEE62151.1| hypothetical protein
OsJ_16938 [Oryza sativa Japonica Group]
Length = 363
Score = 75.1 bits (183), Expect = 9e-12
Identities = 33/55 (60%), Positives = 46/55 (83%)
Frame = -1
Query: 497 GQRFIKISKSPTSPAIAFPFLVKSSGIALLSDEGLEVTGSEMSTIRCEGLNVLVE 333
G R+IK++KSP +PA+AFPF V+SSGI LLSDEG++V E+++IRC+G NVL +
Sbjct: 309 GHRYIKVAKSPMTPAVAFPFTVESSGIILLSDEGIDVPSPEITSIRCQGENVLAQ 363
>gb|AFW82782.1| hypothetical protein ZEAMMB73_481254 [Zea mays]
Length = 390
Score = 74.3 bits (181), Expect = 2e-11
Identities = 33/53 (62%), Positives = 44/53 (83%)
Frame = -1
Query: 497 GQRFIKISKSPTSPAIAFPFLVKSSGIALLSDEGLEVTGSEMSTIRCEGLNVL 339
G RFIK++KSP SPA+AFPF V+SSGI LLSDE ++VTG ++++IRC+G L
Sbjct: 310 GHRFIKVAKSPMSPAVAFPFAVESSGITLLSDESIDVTGPDITSIRCQGFFAL 362
>gb|EOY34263.1| DNA repair (Rad51) family protein isoform 2 [Theobroma cacao]
Length = 377
Score = 73.6 bits (179), Expect = 3e-11
Identities = 32/54 (59%), Positives = 45/54 (83%)
Frame = -1
Query: 497 GQRFIKISKSPTSPAIAFPFLVKSSGIALLSDEGLEVTGSEMSTIRCEGLNVLV 336
GQRFIK++KSP SP +AFPF + SSGI+LLSDEG+E+ G E+++I C+G N ++
Sbjct: 316 GQRFIKVAKSPISPPLAFPFHITSSGISLLSDEGMELMGPEINSIHCQGHNEII 369
>gb|EOY34262.1| DNA repair (Rad51) family protein isoform 1 [Theobroma cacao]
gi|508787008|gb|EOY34264.1| DNA repair (Rad51) family
protein isoform 1 [Theobroma cacao]
Length = 371
Score = 73.6 bits (179), Expect = 3e-11
Identities = 32/54 (59%), Positives = 45/54 (83%)
Frame = -1
Query: 497 GQRFIKISKSPTSPAIAFPFLVKSSGIALLSDEGLEVTGSEMSTIRCEGLNVLV 336
GQRFIK++KSP SP +AFPF + SSGI+LLSDEG+E+ G E+++I C+G N ++
Sbjct: 310 GQRFIKVAKSPISPPLAFPFHITSSGISLLSDEGMELMGPEINSIHCQGHNEII 363
>ref|XP_004487150.1| PREDICTED: DNA repair protein RAD51 homolog 2-like isoform X1
[Cicer arietinum]
Length = 367
Score = 72.4 bits (176), Expect = 6e-11
Identities = 32/53 (60%), Positives = 42/53 (79%)
Frame = -1
Query: 497 GQRFIKISKSPTSPAIAFPFLVKSSGIALLSDEGLEVTGSEMSTIRCEGLNVL 339
GQRFIK++KSP SP +AFPF + SSGI LL D+G+E+ G E++TI C+G N L
Sbjct: 310 GQRFIKLAKSPMSPPLAFPFNITSSGIVLLDDDGIEMKGPEINTIHCQGQNAL 362
>ref|XP_004294689.1| PREDICTED: DNA repair protein RAD51 homolog 2-like [Fragaria vesca
subsp. vesca]
Length = 370
Score = 70.1 bits (170), Expect = 3e-10
Identities = 29/49 (59%), Positives = 44/49 (89%)
Frame = -1
Query: 497 GQRFIKISKSPTSPAIAFPFLVKSSGIALLSDEGLEVTGSEMSTIRCEG 351
G+RFIK++KSP SP++AFPF + SSGI+LL+D+G+E++G E++TI C+G
Sbjct: 310 GKRFIKLAKSPISPSLAFPFNITSSGISLLTDDGIELSGPEINTIHCQG 358
>ref|XP_003597136.1| DNA repair protein RAD51-like protein [Medicago truncatula]
gi|355486184|gb|AES67387.1| DNA repair protein
RAD51-like protein [Medicago truncatula]
Length = 484
Score = 70.1 bits (170), Expect = 3e-10
Identities = 30/53 (56%), Positives = 44/53 (83%)
Frame = -1
Query: 497 GQRFIKISKSPTSPAIAFPFLVKSSGIALLSDEGLEVTGSEMSTIRCEGLNVL 339
G+RFIK++KSP SP +AFPF + SSGI LL ++G+E+ G E+STI C+GL+++
Sbjct: 358 GKRFIKLAKSPMSPPLAFPFHITSSGIVLLDNDGIEMKGPEISTIHCQGLSLM 410
>ref|XP_004251280.1| PREDICTED: DNA repair protein RAD51 homolog 2-like [Solanum
lycopersicum]
Length = 371
Score = 69.7 bits (169), Expect = 4e-10
Identities = 31/62 (50%), Positives = 45/62 (72%)
Frame = -1
Query: 497 GQRFIKISKSPTSPAIAFPFLVKSSGIALLSDEGLEVTGSEMSTIRCEGLNVLVEGAEPF 318
GQRFIK++KSP SP +AFPF + SSGI+LL+D+G+E+ G E+ +I C+G N ++
Sbjct: 310 GQRFIKLAKSPVSPPLAFPFNITSSGISLLNDDGVEMPGPEIHSISCQGHNDVINFGSEM 369
Query: 317 PH 312
H
Sbjct: 370 MH 371
>ref|XP_006597304.1| PREDICTED: DNA repair protein RAD51 homolog 2-like isoform X2
[Glycine max]
Length = 338
Score = 69.3 bits (168), Expect = 5e-10
Identities = 30/52 (57%), Positives = 42/52 (80%)
Frame = -1
Query: 497 GQRFIKISKSPTSPAIAFPFLVKSSGIALLSDEGLEVTGSEMSTIRCEGLNV 342
GQRFIK++KSP S +AFPF + SSG+ LL DEG+E+ G E++TI C+GL++
Sbjct: 270 GQRFIKLAKSPISAPLAFPFKITSSGLVLLDDEGIEMKGPEINTIHCQGLSL 321
>ref|XP_003547508.1| PREDICTED: DNA repair protein RAD51 homolog 2-like isoform X1
[Glycine max]
Length = 378
Score = 69.3 bits (168), Expect = 5e-10
Identities = 30/52 (57%), Positives = 42/52 (80%)
Frame = -1
Query: 497 GQRFIKISKSPTSPAIAFPFLVKSSGIALLSDEGLEVTGSEMSTIRCEGLNV 342
GQRFIK++KSP S +AFPF + SSG+ LL DEG+E+ G E++TI C+GL++
Sbjct: 310 GQRFIKLAKSPISAPLAFPFKITSSGLVLLDDEGIEMKGPEINTIHCQGLSL 361
>ref|XP_006828326.1| hypothetical protein AMTR_s00023p00243610 [Amborella trichopoda]
gi|548832973|gb|ERM95742.1| hypothetical protein
AMTR_s00023p00243610 [Amborella trichopoda]
Length = 366
Score = 68.9 bits (167), Expect = 7e-10
Identities = 29/50 (58%), Positives = 41/50 (82%)
Frame = -1
Query: 497 GQRFIKISKSPTSPAIAFPFLVKSSGIALLSDEGLEVTGSEMSTIRCEGL 348
G+RFIK++KSP SP +AFP+ V SSGI L +D G+EV G +++TIRC+G+
Sbjct: 312 GKRFIKVAKSPISPPLAFPYFVSSSGITLETDNGIEVAGPDINTIRCQGM 361
>ref|XP_002530246.1| conserved hypothetical protein [Ricinus communis]
gi|223530250|gb|EEF32152.1| conserved hypothetical
protein [Ricinus communis]
Length = 238
Score = 67.4 bits (163), Expect = 2e-09
Identities = 28/51 (54%), Positives = 43/51 (84%)
Frame = -1
Query: 497 GQRFIKISKSPTSPAIAFPFLVKSSGIALLSDEGLEVTGSEMSTIRCEGLN 345
GQR+IK++KSP SP ++FPF + +SGIALL D+G E+ G E+++I+C+GL+
Sbjct: 182 GQRYIKVAKSPISPPMSFPFNITASGIALLDDDGTELRGKEINSIQCQGLS 232
>ref|XP_004170620.1| PREDICTED: DNA repair protein RAD51 homolog 2-like [Cucumis
sativus]
Length = 379
Score = 66.2 bits (160), Expect = 4e-09
Identities = 31/64 (48%), Positives = 47/64 (73%)
Frame = -1
Query: 497 GQRFIKISKSPTSPAIAFPFLVKSSGIALLSDEGLEVTGSEMSTIRCEGLNVLVEGAEPF 318
GQRFIK++KSP SP +AFPF + +SGI+LLS+ G E++G+E++ I C+G + ++
Sbjct: 318 GQRFIKLAKSPMSPPLAFPFTITASGISLLSNNGEELSGAEINEIHCQGHSDIISN---- 373
Query: 317 PHLG 306
HLG
Sbjct: 374 -HLG 376
>ref|XP_004149537.1| PREDICTED: DNA repair protein RAD51 homolog 2-like [Cucumis
sativus]
Length = 371
Score = 66.2 bits (160), Expect = 4e-09
Identities = 31/64 (48%), Positives = 47/64 (73%)
Frame = -1
Query: 497 GQRFIKISKSPTSPAIAFPFLVKSSGIALLSDEGLEVTGSEMSTIRCEGLNVLVEGAEPF 318
GQRFIK++KSP SP +AFPF + +SGI+LLS+ G E++G+E++ I C+G + ++
Sbjct: 310 GQRFIKLAKSPMSPPLAFPFTITASGISLLSNNGEELSGAEINEIHCQGHSDIISN---- 365
Query: 317 PHLG 306
HLG
Sbjct: 366 -HLG 368