BLASTX nr result
ID: Zingiber23_contig00040640
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00040640
(243 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_008854652.1| hypothetical chloroplast RF19 [Curcuma rosco... 117 1e-24
gb|AGE93428.1| hypothetical chloroplast RF19 [Alpinia zerumbet] 105 6e-21
ref|YP_007475677.1| hypothetical chloroplast RF19 [Heliconia col... 70 4e-10
emb|CCW72425.1| ycf1 (chloroplast) [Musa acuminata subsp. malacc... 64 3e-08
gb|AHA12982.1| hypothetical chloroplast RF19 [Monocostus uniflorus] 62 8e-08
ref|YP_007475762.1| hypothetical chloroplast RF19 [Zingiber spec... 62 8e-08
gb|AHA13240.1| hypothetical chloroplast RF19 [Thaumatococcus dan... 56 4e-06
gb|AHA13068.1| hypothetical chloroplast RF19 [Costus pulverulentus] 56 4e-06
ref|YP_008854483.1| hypothetical chloroplast RF19 [Musa textilis... 56 6e-06
gb|AHA12813.1| hypothetical chloroplast RF19 [Canna indica] 55 7e-06
>ref|YP_008854652.1| hypothetical chloroplast RF19 [Curcuma roscoeana]
gi|557637559|gb|AHA13154.1| hypothetical chloroplast RF19
[Curcuma roscoeana]
Length = 1815
Score = 117 bits (294), Expect = 1e-24
Identities = 61/80 (76%), Positives = 62/80 (77%)
Frame = +2
Query: 2 KKKISQNKSVKDSILIKLKNQEKNEEKTNLVSDPSKQNKKKPLQKDYAXXXXXXXXXXXX 181
KKKISQNKSVKDSILIKLKNQEKNEEKTNLVSDP+KQNKKKPLQKDY
Sbjct: 1499 KKKISQNKSVKDSILIKLKNQEKNEEKTNLVSDPNKQNKKKPLQKDYVRSESKKKKQCKK 1558
Query: 182 XXXXXLDLFLNKYLIVQLRW 241
LDLFLNKYLIVQLRW
Sbjct: 1559 SKKSELDLFLNKYLIVQLRW 1578
>gb|AGE93428.1| hypothetical chloroplast RF19 [Alpinia zerumbet]
Length = 1795
Score = 105 bits (262), Expect = 6e-21
Identities = 59/82 (71%), Positives = 59/82 (71%), Gaps = 2/82 (2%)
Frame = +2
Query: 2 KKKISQNKSVKDSILIKLKN--QEKNEEKTNLVSDPSKQNKKKPLQKDYAXXXXXXXXXX 175
KKKISQNKSVKDSILIKLK QEKNEEK N VSDPSKQNKKK LQKDYA
Sbjct: 1477 KKKISQNKSVKDSILIKLKKKIQEKNEEKVNPVSDPSKQNKKKTLQKDYARSESKKKKKF 1536
Query: 176 XXXXXXXLDLFLNKYLIVQLRW 241
LDLFLNKYLIVQLRW
Sbjct: 1537 KKSKESELDLFLNKYLIVQLRW 1558
>ref|YP_007475677.1| hypothetical chloroplast RF19 [Heliconia collinsiana]
gi|449326156|gb|AGE92742.1| hypothetical chloroplast RF19
[Heliconia collinsiana]
Length = 1782
Score = 69.7 bits (169), Expect = 4e-10
Identities = 43/87 (49%), Positives = 53/87 (60%), Gaps = 7/87 (8%)
Frame = +2
Query: 2 KKKISQNKSVKDSILIKL--KNQEKNEEK--TNLVSDPSKQNKKKPLQKDYA---XXXXX 160
+K ISQNK++KDSI I+ NQ+KNEE+ +NLVSD KQN+KK L+KDYA
Sbjct: 1464 EKNISQNKNIKDSIKIEFLNSNQQKNEEEGQSNLVSDLRKQNQKKYLEKDYARSDIKKGK 1523
Query: 161 XXXXXXXXXXXXLDLFLNKYLIVQLRW 241
LDLFL KY + QLRW
Sbjct: 1524 KKKQSKKNRERELDLFLKKYFLFQLRW 1550
>emb|CCW72425.1| ycf1 (chloroplast) [Musa acuminata subsp. malaccensis]
gi|525312519|emb|CCW72440.1| ycf1 (chloroplast) [Musa
acuminata subsp. malaccensis]
Length = 1990
Score = 63.5 bits (153), Expect = 3e-08
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Frame = +2
Query: 2 KKKISQNKSVKDSILIKLKNQEKNEE-KTNLVSDPSKQNKKKPLQKDYA----XXXXXXX 166
KK ISQN+++KDS+ I+ +N + +E ++NLVSDP KQN+K+ L++D
Sbjct: 1671 KKNISQNQNIKDSVKIEFQNSNQEKEGQSNLVSDPQKQNQKEYLEEDCTRSNIKKGKKKK 1730
Query: 167 XXXXXXXXXXLDLFLNKYLIVQLRW 241
LDLFL KY I QLRW
Sbjct: 1731 KQSKKNKEGELDLFLKKYFIFQLRW 1755
>gb|AHA12982.1| hypothetical chloroplast RF19 [Monocostus uniflorus]
Length = 1842
Score = 62.0 bits (149), Expect = 8e-08
Identities = 40/85 (47%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Frame = +2
Query: 2 KKKISQNKSVKDSILIKL--KNQEKNEEKTNLVSDPSKQNKKKPLQKDYA---XXXXXXX 166
+KKISQNK++KDSI I+ NQEK EE NLVSD K+++KK Q+DY
Sbjct: 1526 EKKISQNKNIKDSIKIEFPNSNQEKKEE-ANLVSDLRKESQKKYPQEDYMSPDIKKGKKK 1584
Query: 167 XXXXXXXXXXLDLFLNKYLIVQLRW 241
LDLFL KY + QLRW
Sbjct: 1585 KQSKKNKERELDLFLKKYFLFQLRW 1609
>ref|YP_007475762.1| hypothetical chloroplast RF19 [Zingiber spectabile]
gi|449326242|gb|AGE92827.1| hypothetical chloroplast RF19
[Zingiber spectabile]
Length = 1817
Score = 62.0 bits (149), Expect = 8e-08
Identities = 40/80 (50%), Positives = 44/80 (55%)
Frame = +2
Query: 2 KKKISQNKSVKDSILIKLKNQEKNEEKTNLVSDPSKQNKKKPLQKDYAXXXXXXXXXXXX 181
KKKISQNK+VKDSILIKLKNQEK P K KK+ +K
Sbjct: 1527 KKKISQNKNVKDSILIKLKNQEK----------PIKLKKKRRCKKS-------------- 1562
Query: 182 XXXXXLDLFLNKYLIVQLRW 241
LDLFLNKYLI QL+W
Sbjct: 1563 -KESELDLFLNKYLIFQLKW 1581
>gb|AHA13240.1| hypothetical chloroplast RF19 [Thaumatococcus daniellii]
Length = 1874
Score = 56.2 bits (134), Expect = 4e-06
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 7/87 (8%)
Frame = +2
Query: 2 KKKISQNKSVKDSILIKLK--NQEKNEEK--TNLVSDPSKQNKKKPLQKDYA---XXXXX 160
+K I+QNK++KDS+ +K + NQEKNEEK +NL+S+ KQN+KK L+++
Sbjct: 1549 EKNINQNKNIKDSLKMKFQNSNQEKNEEKGQSNLLSNLRKQNQKKHLEENCTKSDIKKGK 1608
Query: 161 XXXXXXXXXXXXLDLFLNKYLIVQLRW 241
LDLFL KY Q++W
Sbjct: 1609 KKKKSKKNKERELDLFLKKYFRFQIKW 1635
>gb|AHA13068.1| hypothetical chloroplast RF19 [Costus pulverulentus]
Length = 1825
Score = 56.2 bits (134), Expect = 4e-06
Identities = 40/87 (45%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
Frame = +2
Query: 2 KKKISQNKSVKDSILIKL--KNQEKNEEKTNL--VSDPSKQNKKKPLQKDYA---XXXXX 160
+K ISQNK++KDSI I+ NQEK EE NL VSD K+++KK Q+DY
Sbjct: 1508 EKNISQNKNIKDSIKIEFTNSNQEKKEE-ANLVFVSDLRKESQKKYPQEDYTRPDIKKGK 1566
Query: 161 XXXXXXXXXXXXLDLFLNKYLIVQLRW 241
LDLFL KY I QLRW
Sbjct: 1567 KKKQSKKNKERELDLFLKKYFIFQLRW 1593
>ref|YP_008854483.1| hypothetical chloroplast RF19 [Musa textilis]
gi|557636970|gb|AHA12572.1| hypothetical chloroplast RF19
[Musa textilis]
Length = 1901
Score = 55.8 bits (133), Expect = 6e-06
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Frame = +2
Query: 11 ISQNKSVKDSILIKLKNQEKNEE-KTNLVSDPSKQNKKKPLQKDYA---XXXXXXXXXXX 178
ISQN+++KDS+ I+ +N + +E ++NLVSDP KQN+K+ ++D
Sbjct: 1586 ISQNQNIKDSVKIEFQNSNQEKEGQSNLVSDPQKQNQKEYPEEDCTRSNIKKGKKKKKSK 1645
Query: 179 XXXXXXLDLFLNKYLIVQLRW 241
LDLFL K+ I QLRW
Sbjct: 1646 KNKEGELDLFLKKFFIFQLRW 1666
>gb|AHA12813.1| hypothetical chloroplast RF19 [Canna indica]
Length = 1803
Score = 55.5 bits (132), Expect = 7e-06
Identities = 36/89 (40%), Positives = 50/89 (56%), Gaps = 9/89 (10%)
Frame = +2
Query: 2 KKKISQNKSVKDSILIKLKNQEKNEEK------TNLVSDPSKQNKKKPLQKDYA---XXX 154
+K IS+NK++KDSI IK++ + N+EK +NLVS+ KQ KK L+++YA
Sbjct: 1482 EKNISENKNIKDSIKIKMELKNSNQEKKKKEGQSNLVSNLQKQ--KKDLEENYAKSDIKK 1539
Query: 155 XXXXXXXXXXXXXXLDLFLNKYLIVQLRW 241
LDLFL KY + QLRW
Sbjct: 1540 SQKKKESKKKKESELDLFLKKYFLFQLRW 1568