BLASTX nr result

ID: Zingiber23_contig00040588 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00040588
         (716 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004289408.1| PREDICTED: protein MKS1-like [Fragaria vesca...    59   2e-06

>ref|XP_004289408.1| PREDICTED: protein MKS1-like [Fragaria vesca subsp. vesca]
          Length = 229

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 50/136 (36%), Positives = 63/136 (46%), Gaps = 16/136 (11%)
 Frame = -2

Query: 712 GALSPAARIASFERPSPRA-----------SAARSGTSDLAMDG-LPAPDRQSLFPGILT 569
           G LSPAAR+AS E+ SP +           +   +   D  MD  L   D    FPGIL+
Sbjct: 97  GNLSPAARLASIEKTSPSSDHNKHFPPLNTTQTAAAIDDDFMDSILEGIDIMGQFPGILS 156

Query: 568 PMPAALPPIXXXXXXXXXXXXXXXXXXPAFANKTPNNLSS---SFLASPSNNLLSTPTV- 401
           P PA +PPI                        + NN++S   SF+ASPS  L S P V 
Sbjct: 157 PAPATMPPIPPGYFSPAAEDPQNFNNWQGVV-ASSNNINSGFNSFMASPS-TLFSAPLVS 214

Query: 400 PSPGAIWDLMHQFPDS 353
           PSP + WDL + F DS
Sbjct: 215 PSPSS-WDLFNNFLDS 229


Top