BLASTX nr result
ID: Zingiber23_contig00040577
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00040577
(457 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004978967.1| PREDICTED: la-related protein 6-like [Setari... 68 1e-09
gb|EMT07023.1| La-related protein 7 [Aegilops tauschii] 66 4e-09
gb|EEC67957.1| hypothetical protein OsI_35696 [Oryza sativa Indi... 65 7e-09
gb|AAX95155.1| At2g43970/F6E13.10 [Oryza sativa Japonica Group] ... 65 1e-08
gb|EEE51926.1| hypothetical protein OsJ_33536 [Oryza sativa Japo... 65 1e-08
ref|NP_001067617.1| Os11g0248200 [Oryza sativa Japonica Group] g... 65 1e-08
gb|AAX96755.1| At2g43970/F6E13.10 [Oryza sativa Japonica Group] 65 1e-08
ref|NP_001062396.1| Os08g0542900 [Oryza sativa Japonica Group] g... 64 2e-08
dbj|BAJ88869.1| predicted protein [Hordeum vulgare subsp. vulgare] 64 2e-08
dbj|BAK05864.1| predicted protein [Hordeum vulgare subsp. vulgare] 64 2e-08
ref|XP_003577639.1| PREDICTED: uncharacterized protein LOC100842... 62 8e-08
ref|XP_006660346.1| PREDICTED: la-related protein 6-like [Oryza ... 62 1e-07
ref|XP_006397570.1| hypothetical protein EUTSA_v10001395mg [Eutr... 61 1e-07
gb|EMT12290.1| La-related protein 7 [Aegilops tauschii] 61 1e-07
gb|EMS68292.1| hypothetical protein TRIUR3_13301 [Triticum urartu] 61 2e-07
gb|ESW11074.1| hypothetical protein PHAVU_009G2633001g, partial ... 60 2e-07
gb|EOY06991.1| RNA-binding protein, putative isoform 3 [Theobrom... 60 2e-07
gb|EOY06990.1| RNA-binding protein, putative isoform 2 [Theobrom... 60 2e-07
gb|EOY06989.1| RNA-binding protein, putative isoform 1 [Theobrom... 60 2e-07
ref|XP_003521844.1| PREDICTED: la-related protein 6-like isoform... 60 2e-07
>ref|XP_004978967.1| PREDICTED: la-related protein 6-like [Setaria italica]
Length = 473
Score = 68.2 bits (165), Expect = 1e-09
Identities = 33/62 (53%), Positives = 41/62 (66%), Gaps = 5/62 (8%)
Frame = -3
Query: 404 NSRVAASLVGTPPSSHSIHSDREQL-----VSNKQPPGPRMPDGTRGFTIGRGKSALPAS 240
N+R A VGTPPS H + ++++ +NKQPPGPRMPDGTRGF +GRGK A
Sbjct: 405 NNRNGAHPVGTPPSGHQVKNEQQSQPQQPSAANKQPPGPRMPDGTRGFAMGRGKPQSSAP 464
Query: 239 TV 234
TV
Sbjct: 465 TV 466
>gb|EMT07023.1| La-related protein 7 [Aegilops tauschii]
Length = 397
Score = 66.2 bits (160), Expect = 4e-09
Identities = 32/55 (58%), Positives = 40/55 (72%), Gaps = 6/55 (10%)
Frame = -3
Query: 407 NNSRVAASLVGTPPSSHSIHSDREQLVS------NKQPPGPRMPDGTRGFTIGRG 261
NN+R A VGTPPSSH + ++++Q S NKQ PGPRMPDGTRGF++GRG
Sbjct: 329 NNNRSGAHPVGTPPSSHPVKAEQQQTQSSPPAGANKQLPGPRMPDGTRGFSMGRG 383
>gb|EEC67957.1| hypothetical protein OsI_35696 [Oryza sativa Indica Group]
Length = 489
Score = 65.5 bits (158), Expect = 7e-09
Identities = 33/70 (47%), Positives = 43/70 (61%), Gaps = 13/70 (18%)
Frame = -3
Query: 407 NNSRVAASLVGTPPSSHSIHSDREQLV-------------SNKQPPGPRMPDGTRGFTIG 267
+N+R AA VGTPPS+H ++++Q +NKQPPGPRMPDGTRGF +G
Sbjct: 411 SNNRNAAHPVGTPPSNHPAKNEQQQQAQPQPQPQPQPPAGANKQPPGPRMPDGTRGFAMG 470
Query: 266 RGKSALPAST 237
RGK +T
Sbjct: 471 RGKPQTSTTT 480
>gb|AAX95155.1| At2g43970/F6E13.10 [Oryza sativa Japonica Group]
gi|77549565|gb|ABA92362.1| La domain-containing protein,
putative, expressed [Oryza sativa Japonica Group]
Length = 341
Score = 64.7 bits (156), Expect = 1e-08
Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 15/72 (20%)
Frame = -3
Query: 407 NNSRVAASLVGTPPSSHSIHSDREQLV---------------SNKQPPGPRMPDGTRGFT 273
+N+R AA VGTPPS+H ++++Q +NKQPPGPRMPDGTRGF
Sbjct: 261 SNNRNAAHPVGTPPSNHPAKNEQQQQAQPQPQPQPQPQPPAGANKQPPGPRMPDGTRGFA 320
Query: 272 IGRGKSALPAST 237
+GRGK +T
Sbjct: 321 MGRGKPQTSTTT 332
>gb|EEE51926.1| hypothetical protein OsJ_33536 [Oryza sativa Japonica Group]
Length = 470
Score = 64.7 bits (156), Expect = 1e-08
Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 15/72 (20%)
Frame = -3
Query: 407 NNSRVAASLVGTPPSSHSIHSDREQLV---------------SNKQPPGPRMPDGTRGFT 273
+N+R AA VGTPPS+H ++++Q +NKQPPGPRMPDGTRGF
Sbjct: 390 SNNRNAAHPVGTPPSNHPAKNEQQQQAQPQPQPQPQPQPPAGANKQPPGPRMPDGTRGFA 449
Query: 272 IGRGKSALPAST 237
+GRGK +T
Sbjct: 450 MGRGKPQTSTTT 461
>ref|NP_001067617.1| Os11g0248200 [Oryza sativa Japonica Group]
gi|113644839|dbj|BAF27980.1| Os11g0248200, partial
[Oryza sativa Japonica Group]
Length = 354
Score = 64.7 bits (156), Expect = 1e-08
Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 15/72 (20%)
Frame = -3
Query: 407 NNSRVAASLVGTPPSSHSIHSDREQLV---------------SNKQPPGPRMPDGTRGFT 273
+N+R AA VGTPPS+H ++++Q +NKQPPGPRMPDGTRGF
Sbjct: 274 SNNRNAAHPVGTPPSNHPAKNEQQQQAQPQPQPQPQPQPPAGANKQPPGPRMPDGTRGFA 333
Query: 272 IGRGKSALPAST 237
+GRGK +T
Sbjct: 334 MGRGKPQTSTTT 345
>gb|AAX96755.1| At2g43970/F6E13.10 [Oryza sativa Japonica Group]
Length = 505
Score = 64.7 bits (156), Expect = 1e-08
Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 15/72 (20%)
Frame = -3
Query: 407 NNSRVAASLVGTPPSSHSIHSDREQLV---------------SNKQPPGPRMPDGTRGFT 273
+N+R AA VGTPPS+H ++++Q +NKQPPGPRMPDGTRGF
Sbjct: 425 SNNRNAAHPVGTPPSNHPAKNEQQQQAQPQPQPQPQPQPPAGANKQPPGPRMPDGTRGFA 484
Query: 272 IGRGKSALPAST 237
+GRGK +T
Sbjct: 485 MGRGKPQTSTTT 496
>ref|NP_001062396.1| Os08g0542900 [Oryza sativa Japonica Group]
gi|42407839|dbj|BAD08982.1| putative RNA recognition
motif (RRM)-containing protein [Oryza sativa Japonica
Group] gi|113624365|dbj|BAF24310.1| Os08g0542900 [Oryza
sativa Japonica Group] gi|215704320|dbj|BAG93754.1|
unnamed protein product [Oryza sativa Japonica Group]
gi|218201546|gb|EEC83973.1| hypothetical protein
OsI_30107 [Oryza sativa Indica Group]
gi|222640954|gb|EEE69086.1| hypothetical protein
OsJ_28141 [Oryza sativa Japonica Group]
Length = 427
Score = 64.3 bits (155), Expect = 2e-08
Identities = 32/57 (56%), Positives = 39/57 (68%)
Frame = -3
Query: 404 NSRVAASLVGTPPSSHSIHSDREQLVSNKQPPGPRMPDGTRGFTIGRGKSALPASTV 234
+SR A +GTPPS+HS +D +K PPGPRMPDGTRGFT+GRGK P + V
Sbjct: 375 HSRDANHPIGTPPSNHSALADHP----SKPPPGPRMPDGTRGFTMGRGKPLNPTNAV 427
>dbj|BAJ88869.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 351
Score = 63.9 bits (154), Expect = 2e-08
Identities = 31/54 (57%), Positives = 39/54 (72%), Gaps = 6/54 (11%)
Frame = -3
Query: 404 NSRVAASLVGTPPSSHSIHSDREQLVS------NKQPPGPRMPDGTRGFTIGRG 261
N+R A VGTPPSSH + ++++Q S NKQ PGPRMPDGTRGF++GRG
Sbjct: 284 NNRSGAHPVGTPPSSHPVKAEQQQTQSSPPAGANKQLPGPRMPDGTRGFSMGRG 337
>dbj|BAK05864.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 483
Score = 63.9 bits (154), Expect = 2e-08
Identities = 31/54 (57%), Positives = 39/54 (72%), Gaps = 6/54 (11%)
Frame = -3
Query: 404 NSRVAASLVGTPPSSHSIHSDREQLVS------NKQPPGPRMPDGTRGFTIGRG 261
N+R A VGTPPSSH + ++++Q S NKQ PGPRMPDGTRGF++GRG
Sbjct: 416 NNRSGAHPVGTPPSSHPVKAEQQQTQSSPPAGANKQLPGPRMPDGTRGFSMGRG 469
>ref|XP_003577639.1| PREDICTED: uncharacterized protein LOC100842995 [Brachypodium
distachyon]
Length = 488
Score = 62.0 bits (149), Expect = 8e-08
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 6/55 (10%)
Frame = -3
Query: 404 NSRVAASLVGTPPSSHSIHSDREQLV------SNKQPPGPRMPDGTRGFTIGRGK 258
N+R A VGTPPSSH + ++ +Q ++KQ PGPRMPDGTRGF++GRGK
Sbjct: 420 NNRSGAHPVGTPPSSHPVKTEPQQTQYPPPAGASKQHPGPRMPDGTRGFSMGRGK 474
>ref|XP_006660346.1| PREDICTED: la-related protein 6-like [Oryza brachyantha]
Length = 415
Score = 61.6 bits (148), Expect = 1e-07
Identities = 31/55 (56%), Positives = 36/55 (65%)
Frame = -3
Query: 404 NSRVAASLVGTPPSSHSIHSDREQLVSNKQPPGPRMPDGTRGFTIGRGKSALPAS 240
+ R A VGTPPS+HS +D K PPGPRMPDGTRGFT+GRGK P +
Sbjct: 363 HGRDAGHSVGTPPSNHSALADHPL----KPPPGPRMPDGTRGFTMGRGKPLNPTN 413
>ref|XP_006397570.1| hypothetical protein EUTSA_v10001395mg [Eutrema salsugineum]
gi|557098643|gb|ESQ39023.1| hypothetical protein
EUTSA_v10001395mg [Eutrema salsugineum]
Length = 532
Score = 61.2 bits (147), Expect = 1e-07
Identities = 25/44 (56%), Positives = 36/44 (81%)
Frame = -3
Query: 380 VGTPPSSHSIHSDREQLVSNKQPPGPRMPDGTRGFTIGRGKSAL 249
VGTPPS++ +++ +Q + +QPPGPRMPDGTRGF++GRGK +
Sbjct: 485 VGTPPSNNPMNNMEQQGMGKQQPPGPRMPDGTRGFSMGRGKPVM 528
>gb|EMT12290.1| La-related protein 7 [Aegilops tauschii]
Length = 429
Score = 61.2 bits (147), Expect = 1e-07
Identities = 28/49 (57%), Positives = 36/49 (73%)
Frame = -3
Query: 380 VGTPPSSHSIHSDREQLVSNKQPPGPRMPDGTRGFTIGRGKSALPASTV 234
VGTPP++ I ++ V+NKQPPGPRMPDGTRGF +GRGK + + V
Sbjct: 379 VGTPPNTQLIMVEQLLPVANKQPPGPRMPDGTRGFAMGRGKPSSASCAV 427
>gb|EMS68292.1| hypothetical protein TRIUR3_13301 [Triticum urartu]
Length = 274
Score = 60.8 bits (146), Expect = 2e-07
Identities = 28/49 (57%), Positives = 36/49 (73%)
Frame = -3
Query: 380 VGTPPSSHSIHSDREQLVSNKQPPGPRMPDGTRGFTIGRGKSALPASTV 234
VG PP++ I ++ V+NKQPPGPRMPDGTRGF +GRGK + + TV
Sbjct: 224 VGIPPNTQLIMVEQLLPVANKQPPGPRMPDGTRGFAMGRGKPSSASCTV 272
>gb|ESW11074.1| hypothetical protein PHAVU_009G2633001g, partial [Phaseolus
vulgaris]
Length = 128
Score = 60.5 bits (145), Expect = 2e-07
Identities = 28/41 (68%), Positives = 35/41 (85%)
Frame = -3
Query: 380 VGTPPSSHSIHSDREQLVSNKQPPGPRMPDGTRGFTIGRGK 258
VGTPPS+++I +D+ V KQPPGPRMPDGTRGF++GRGK
Sbjct: 84 VGTPPSNNTIFTDQ---VIAKQPPGPRMPDGTRGFSMGRGK 121
>gb|EOY06991.1| RNA-binding protein, putative isoform 3 [Theobroma cacao]
Length = 501
Score = 60.5 bits (145), Expect = 2e-07
Identities = 31/50 (62%), Positives = 35/50 (70%)
Frame = -3
Query: 407 NNSRVAASLVGTPPSSHSIHSDREQLVSNKQPPGPRMPDGTRGFTIGRGK 258
+NSR + VGTPPS+ S EQ KQPPGPRMPDGTRGF +GRGK
Sbjct: 447 HNSR--GNHVGTPPSATSNLVSNEQATVAKQPPGPRMPDGTRGFAMGRGK 494
>gb|EOY06990.1| RNA-binding protein, putative isoform 2 [Theobroma cacao]
Length = 431
Score = 60.5 bits (145), Expect = 2e-07
Identities = 31/50 (62%), Positives = 35/50 (70%)
Frame = -3
Query: 407 NNSRVAASLVGTPPSSHSIHSDREQLVSNKQPPGPRMPDGTRGFTIGRGK 258
+NSR + VGTPPS+ S EQ KQPPGPRMPDGTRGF +GRGK
Sbjct: 377 HNSR--GNHVGTPPSATSNLVSNEQATVAKQPPGPRMPDGTRGFAMGRGK 424
>gb|EOY06989.1| RNA-binding protein, putative isoform 1 [Theobroma cacao]
Length = 500
Score = 60.5 bits (145), Expect = 2e-07
Identities = 31/50 (62%), Positives = 35/50 (70%)
Frame = -3
Query: 407 NNSRVAASLVGTPPSSHSIHSDREQLVSNKQPPGPRMPDGTRGFTIGRGK 258
+NSR + VGTPPS+ S EQ KQPPGPRMPDGTRGF +GRGK
Sbjct: 446 HNSR--GNHVGTPPSATSNLVSNEQATVAKQPPGPRMPDGTRGFAMGRGK 493
>ref|XP_003521844.1| PREDICTED: la-related protein 6-like isoformX1 [Glycine max]
Length = 475
Score = 60.5 bits (145), Expect = 2e-07
Identities = 28/41 (68%), Positives = 35/41 (85%)
Frame = -3
Query: 380 VGTPPSSHSIHSDREQLVSNKQPPGPRMPDGTRGFTIGRGK 258
VGTPPS+++I +D+ V KQPPGPRMPDGTRGF++GRGK
Sbjct: 431 VGTPPSNNTIFTDQ---VIAKQPPGPRMPDGTRGFSMGRGK 468