BLASTX nr result
ID: Zingiber23_contig00040209
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00040209
(232 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAT38724.1| Putative retrotransposon protein, identical [Sola... 66 4e-09
gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum ... 66 4e-09
ref|XP_006360638.1| PREDICTED: uncharacterized protein LOC102581... 65 1e-08
gb|AAV31171.1| Putative polyprotein, identical [Solanum tuberosum] 60 4e-07
gb|ABI34354.1| Retrotransposon gag protein [Solanum demissum] 59 7e-07
ref|XP_004250669.1| PREDICTED: uncharacterized protein LOC101268... 58 1e-06
gb|AAU90308.2| Zinc knuckle family protein [Solanum tuberosum] 58 2e-06
ref|XP_004514413.1| PREDICTED: uncharacterized protein LOC101492... 57 2e-06
ref|XP_004243069.1| PREDICTED: uncharacterized protein LOC101251... 57 2e-06
ref|XP_004234721.1| PREDICTED: uncharacterized protein LOC101244... 57 2e-06
gb|AAV31186.2| Gag-pol polyprotein, putative [Solanum tuberosum] 57 2e-06
gb|EXC21912.1| hypothetical protein L484_011077 [Morus notabilis] 57 3e-06
gb|EMJ21917.1| hypothetical protein PRUPE_ppa022673mg [Prunus pe... 57 3e-06
ref|XP_004489079.1| PREDICTED: uncharacterized protein LOC101515... 56 4e-06
gb|EMJ26136.1| hypothetical protein PRUPE_ppa021588mg [Prunus pe... 56 4e-06
ref|XP_006364939.1| PREDICTED: uncharacterized protein LOC102581... 56 6e-06
ref|XP_006363744.1| PREDICTED: uncharacterized protein LOC102584... 56 6e-06
gb|EOY21530.1| DNA/RNA polymerases superfamily protein, putative... 56 6e-06
gb|EOY21529.1| DNA/RNA polymerases superfamily protein, putative... 56 6e-06
ref|XP_006833015.1| hypothetical protein AMTR_s00876p00007370, p... 55 7e-06
>gb|AAT38724.1| Putative retrotransposon protein, identical [Solanum demissum]
Length = 1602
Score = 66.2 bits (160), Expect = 4e-09
Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +2
Query: 2 GTKRKQWDSGSNQKGGPETKQTKLLP-CPKCGRSHPGACLLGKTGCYSCGQEGHMAKQCP 178
G K + + Q G +++ L P C +CGR+HPG C G+TGC+ CGQEGH K+CP
Sbjct: 355 GQNSKDFKARPVQSSGSVAQRSSLFPACARCGRTHPGKCRDGQTGCFKCGQEGHFVKECP 414
>gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1515
Score = 66.2 bits (160), Expect = 4e-09
Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +2
Query: 2 GTKRKQWDSGSNQKGGPETKQTKLLP-CPKCGRSHPGACLLGKTGCYSCGQEGHMAKQCP 178
G K + + Q G +++ L P C +CGR+HPG C G+TGC+ CGQEGH K+CP
Sbjct: 349 GQNSKDFKARPVQSSGSVAQRSSLFPACARCGRTHPGKCRDGQTGCFKCGQEGHFVKECP 408
>ref|XP_006360638.1| PREDICTED: uncharacterized protein LOC102581016 [Solanum tuberosum]
Length = 466
Score = 64.7 bits (156), Expect = 1e-08
Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +2
Query: 2 GTKRKQWDSGSNQKGGPETKQTKLLP-CPKCGRSHPGACLLGKTGCYSCGQEGHMAKQCP 178
G K + + Q G + L P C +CGR+HPG C G+TGC+ CGQEGH K+CP
Sbjct: 230 GQNSKDFKARPAQSSGSVAHRGSLFPTCARCGRTHPGKCRDGQTGCFKCGQEGHFVKECP 289
>gb|AAV31171.1| Putative polyprotein, identical [Solanum tuberosum]
Length = 1487
Score = 59.7 bits (143), Expect = 4e-07
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +2
Query: 2 GTKRKQWDSGSNQKGGPETKQTKLLP-CPKCGRSHPGACLLGKTGCYSCGQEGHMAKQCP 178
G K + + Q G + L P C +CGR+HP C G+TGC+ CG+EGH K+CP
Sbjct: 297 GQNSKDFKARPTQSSGSVAQGGSLFPACARCGRTHPVKCRDGQTGCFECGKEGHFMKECP 356
>gb|ABI34354.1| Retrotransposon gag protein [Solanum demissum]
Length = 4543
Score = 58.9 bits (141), Expect = 7e-07
Identities = 26/51 (50%), Positives = 31/51 (60%)
Frame = +2
Query: 26 SGSNQKGGPETKQTKLLPCPKCGRSHPGACLLGKTGCYSCGQEGHMAKQCP 178
SGS +GG + C KCGR HPG C G+T C+ CGQEGH K+CP
Sbjct: 267 SGSVVRGG-----SSFPACAKCGRVHPGKCRQGQTCCFRCGQEGHFMKECP 312
Score = 58.9 bits (141), Expect = 7e-07
Identities = 26/51 (50%), Positives = 31/51 (60%)
Frame = +2
Query: 26 SGSNQKGGPETKQTKLLPCPKCGRSHPGACLLGKTGCYSCGQEGHMAKQCP 178
SGS +GG + C KCGR HPG C G+T C+ CGQEGH K+CP
Sbjct: 1777 SGSVVRGG-----SSFPACAKCGRVHPGKCRQGQTCCFRCGQEGHFMKECP 1822
Score = 58.9 bits (141), Expect = 7e-07
Identities = 26/51 (50%), Positives = 31/51 (60%)
Frame = +2
Query: 26 SGSNQKGGPETKQTKLLPCPKCGRSHPGACLLGKTGCYSCGQEGHMAKQCP 178
SGS +GG + C KCGR HPG C G+T C+ CGQEGH K+CP
Sbjct: 3287 SGSVVRGG-----SSFPACAKCGRVHPGKCRQGQTCCFRCGQEGHFMKECP 3332
>ref|XP_004250669.1| PREDICTED: uncharacterized protein LOC101268343 [Solanum
lycopersicum]
Length = 191
Score = 58.2 bits (139), Expect = 1e-06
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = +2
Query: 29 GSNQKG---GPETKQTKLLPCPKCGRSHPGACLLGKTGCYSCGQEGHMAKQCPNK 184
GS +G G +T T CPKC ++HPG CL GK C+ CGQ GH + CP++
Sbjct: 131 GSKSEGSISGTKTNPT----CPKCSKNHPGECLAGKEICFGCGQSGHRLRDCPSR 181
>gb|AAU90308.2| Zinc knuckle family protein [Solanum tuberosum]
Length = 347
Score = 57.8 bits (138), Expect = 2e-06
Identities = 22/46 (47%), Positives = 30/46 (65%)
Frame = +2
Query: 41 KGGPETKQTKLLPCPKCGRSHPGACLLGKTGCYSCGQEGHMAKQCP 178
+G + +K C +CGR+H G C G+TGC+ CGQEGH K+CP
Sbjct: 180 QGSMVPRGSKAPACARCGRTHIGKCRDGQTGCFKCGQEGHFLKECP 225
>ref|XP_004514413.1| PREDICTED: uncharacterized protein LOC101492066, partial [Cicer
arietinum]
Length = 449
Score = 57.4 bits (137), Expect = 2e-06
Identities = 21/35 (60%), Positives = 25/35 (71%)
Frame = +2
Query: 80 CPKCGRSHPGACLLGKTGCYSCGQEGHMAKQCPNK 184
CPKCGRSHPG CL GK C+ C GHM++ CP +
Sbjct: 117 CPKCGRSHPGECLYGKNVCFWCKISGHMSQDCPQR 151
>ref|XP_004243069.1| PREDICTED: uncharacterized protein LOC101251899 [Solanum
lycopersicum]
Length = 257
Score = 57.4 bits (137), Expect = 2e-06
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = +2
Query: 80 CPKCGRSHPGACLLGKTGCYSCGQEGHMAKQCPN 181
C CGR HPG C G+TGC+ CG+EGH ++CPN
Sbjct: 219 CVTCGRIHPGKCRDGQTGCFKCGKEGHFMRECPN 252
>ref|XP_004234721.1| PREDICTED: uncharacterized protein LOC101244556 [Solanum
lycopersicum]
Length = 463
Score = 57.4 bits (137), Expect = 2e-06
Identities = 22/39 (56%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +2
Query: 65 TKLLPC-PKCGRSHPGACLLGKTGCYSCGQEGHMAKQCP 178
TK P PKC ++HPG CL+GK GC+ CGQ GH + CP
Sbjct: 139 TKTYPTFPKCDKNHPGECLVGKEGCFGCGQSGHRLRHCP 177
>gb|AAV31186.2| Gag-pol polyprotein, putative [Solanum tuberosum]
Length = 401
Score = 57.4 bits (137), Expect = 2e-06
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = +2
Query: 80 CPKCGRSHPGACLLGKTGCYSCGQEGHMAKQCP 178
C KCG++HPGAC G GC+ C QEGH K+CP
Sbjct: 194 CAKCGKNHPGACRDGSNGCFKCDQEGHFMKECP 226
>gb|EXC21912.1| hypothetical protein L484_011077 [Morus notabilis]
Length = 122
Score = 57.0 bits (136), Expect = 3e-06
Identities = 24/48 (50%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +2
Query: 35 NQKGGPETKQTKLLP-CPKCGRSHPGACLLGKTGCYSCGQEGHMAKQC 175
NQK P+ K +P CPKCG++H C LG CY CG+E H AK C
Sbjct: 71 NQKSQPQKKSNTNIPLCPKCGKTHRRECRLGTNSCYRCGKECHYAKNC 118
>gb|EMJ21917.1| hypothetical protein PRUPE_ppa022673mg [Prunus persica]
Length = 1506
Score = 56.6 bits (135), Expect = 3e-06
Identities = 28/62 (45%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Frame = +2
Query: 2 GTKR---KQWDSGSNQKGGPETKQTKLLPCPKCGRSHPGACLLGKTGCYSCGQEGHMAKQ 172
GT R +Q SGS ++ P+ C +CGR H G C G TGCY CGQ GH K
Sbjct: 322 GTARGAGRQLLSGSGRRSRPQ--------CARCGRYHSGPCQQGTTGCYYCGQPGHFQKD 373
Query: 173 CP 178
CP
Sbjct: 374 CP 375
>ref|XP_004489079.1| PREDICTED: uncharacterized protein LOC101515713 [Cicer arietinum]
Length = 943
Score = 56.2 bits (134), Expect = 4e-06
Identities = 20/35 (57%), Positives = 25/35 (71%)
Frame = +2
Query: 80 CPKCGRSHPGACLLGKTGCYSCGQEGHMAKQCPNK 184
CPKCGRSHPG CL GK C+ C GH+++ CP +
Sbjct: 268 CPKCGRSHPGECLYGKNICFWCKTPGHLSQDCPQR 302
>gb|EMJ26136.1| hypothetical protein PRUPE_ppa021588mg [Prunus persica]
Length = 392
Score = 56.2 bits (134), Expect = 4e-06
Identities = 25/55 (45%), Positives = 30/55 (54%)
Frame = +2
Query: 14 KQWDSGSNQKGGPETKQTKLLPCPKCGRSHPGACLLGKTGCYSCGQEGHMAKQCP 178
+Q SGS ++ P+ C +CGR H G C G TGCY CGQ GH K CP
Sbjct: 275 RQLLSGSGRRSRPQ--------CARCGRYHSGPCQQGTTGCYYCGQPGHFRKDCP 321
>ref|XP_006364939.1| PREDICTED: uncharacterized protein LOC102581051 [Solanum tuberosum]
Length = 1946
Score = 55.8 bits (133), Expect = 6e-06
Identities = 24/45 (53%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Frame = +2
Query: 80 CPKCGRSHPGACLLGKTGCYSCGQEGHMAKQCP---NKFKAPQPQ 205
CPKCG+ H G CL CYSCG+ GH A CP NK K +PQ
Sbjct: 851 CPKCGKGHGGPCLRNTGACYSCGEMGHKAMDCPRNGNKGKEVRPQ 895
>ref|XP_006363744.1| PREDICTED: uncharacterized protein LOC102584707 [Solanum tuberosum]
Length = 196
Score = 55.8 bits (133), Expect = 6e-06
Identities = 24/45 (53%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Frame = +2
Query: 80 CPKCGRSHPGACLLGKTGCYSCGQEGHMAKQCP---NKFKAPQPQ 205
CPKCG+ H G CL CYSCG+ GH A CP NK K +PQ
Sbjct: 100 CPKCGKGHGGPCLRNTGACYSCGEMGHKAMDCPRNRNKGKEVRPQ 144
>gb|EOY21530.1| DNA/RNA polymerases superfamily protein, putative isoform 2
[Theobroma cacao]
Length = 398
Score = 55.8 bits (133), Expect = 6e-06
Identities = 21/44 (47%), Positives = 27/44 (61%)
Frame = +2
Query: 71 LLPCPKCGRSHPGACLLGKTGCYSCGQEGHMAKQCPNKFKAPQP 202
+ PCP CG+ + G CLL + CYSCGQ GH+ K CP + P
Sbjct: 350 IAPCPTCGKRYRGQCLLATSTCYSCGQVGHVRKNCPRSQHSEGP 393
>gb|EOY21529.1| DNA/RNA polymerases superfamily protein, putative isoform 1
[Theobroma cacao]
Length = 519
Score = 55.8 bits (133), Expect = 6e-06
Identities = 21/44 (47%), Positives = 27/44 (61%)
Frame = +2
Query: 71 LLPCPKCGRSHPGACLLGKTGCYSCGQEGHMAKQCPNKFKAPQP 202
+ PCP CG+ + G CLL + CYSCGQ GH+ K CP + P
Sbjct: 471 IAPCPTCGKRYRGQCLLATSTCYSCGQVGHVRKNCPRSQHSEGP 514
>ref|XP_006833015.1| hypothetical protein AMTR_s00876p00007370, partial [Amborella
trichopoda] gi|548837601|gb|ERM98293.1| hypothetical
protein AMTR_s00876p00007370, partial [Amborella
trichopoda]
Length = 366
Score = 55.5 bits (132), Expect = 7e-06
Identities = 21/35 (60%), Positives = 21/35 (60%)
Frame = +2
Query: 80 CPKCGRSHPGACLLGKTGCYSCGQEGHMAKQCPNK 184
CP CGR HPG C L CY CGQ GH K CP K
Sbjct: 316 CPTCGRKHPGECRLKGKTCYKCGQPGHYKKDCPKK 350