BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00040183
         (282 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004168223.1| PREDICTED: pentatricopeptide repeat-containi...    78   1e-12
ref|XP_004139152.1| PREDICTED: pentatricopeptide repeat-containi...    78   1e-12
ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containi...    75   7e-12
emb|CBI23204.3| unnamed protein product [Vitis vinifera]               75   7e-12
ref|XP_004295288.1| PREDICTED: pentatricopeptide repeat-containi...    74   2e-11
gb|EMJ14151.1| hypothetical protein PRUPE_ppa022121mg [Prunus pe...    74   2e-11
ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containi...    72   8e-11
ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containi...    70   3e-10
ref|XP_004486315.1| PREDICTED: pentatricopeptide repeat-containi...    69   6e-10
gb|ESW19690.1| hypothetical protein PHAVU_006G147000g [Phaseolus...    67   2e-09
gb|EOY28770.1| Tetratricopeptide repeat-like superfamily protein...    67   3e-09
ref|XP_004233783.1| PREDICTED: pentatricopeptide repeat-containi...    63   5e-08
ref|XP_006348147.1| PREDICTED: pentatricopeptide repeat-containi...    61   1e-07
ref|XP_002874797.1| pentatricopeptide repeat-containing protein ...    61   1e-07
gb|EXB77045.1| hypothetical protein L484_014171 [Morus notabilis]      61   2e-07
ref|XP_006396695.1| hypothetical protein EUTSA_v10028467mg [Eutr...    60   2e-07
gb|ABR16520.1| unknown [Picea sitchensis]                              59   5e-07
gb|EXC32781.1| hypothetical protein L484_019895 [Morus notabilis]      59   9e-07
gb|EXB40433.1| hypothetical protein L484_013736 [Morus notabilis]      59   9e-07
ref|XP_002522430.1| pentatricopeptide repeat-containing protein,...    59   9e-07

>ref|XP_004168223.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Cucumis sativus]
          Length = 743

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 43/96 (44%), Positives = 58/96 (60%), Gaps = 2/96 (2%)
 Frame = -1

Query: 282 RLFDEIPLKFSVVPWTTLIAAYSRAGCHETAFSFLRDMRRSDVRPNSVTFLSMLP-LDLV 106
           ++FD + LK +VVPWTT+I +YSR G  + AFS  + MR S ++P SVT LS+LP +  +
Sbjct: 105 KVFDTM-LKRNVVPWTTIIGSYSREGDIDIAFSMFKQMRESGIQPTSVTLLSLLPGISKL 163

Query: 105 P-LQCLHASAFRHGLESXXXXXXXXXXAYGRCGCVA 1
           P L CLH     HG ES           YG+CG +A
Sbjct: 164 PLLLCLHCLIILHGFESDLALSNSMVNMYGKCGRIA 199


>ref|XP_004139152.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Cucumis sativus]
          Length = 743

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 43/96 (44%), Positives = 58/96 (60%), Gaps = 2/96 (2%)
 Frame = -1

Query: 282 RLFDEIPLKFSVVPWTTLIAAYSRAGCHETAFSFLRDMRRSDVRPNSVTFLSMLP-LDLV 106
           ++FD + LK +VVPWTT+I +YSR G  + AFS  + MR S ++P SVT LS+LP +  +
Sbjct: 105 KVFDTM-LKRNVVPWTTIIGSYSREGDIDIAFSMFKQMRESGIQPTSVTLLSLLPGISKL 163

Query: 105 P-LQCLHASAFRHGLESXXXXXXXXXXAYGRCGCVA 1
           P L CLH     HG ES           YG+CG +A
Sbjct: 164 PLLLCLHCLIILHGFESDLALSNSMVNMYGKCGRIA 199


>ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Vitis vinifera]
          Length = 732

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
 Frame = -1

Query: 252 SVVPWTTLIAAYSRAGCHETAFSFLRDMRRSDVRPNSVTFLSMLP--LDLVPLQCLHASA 79
           +VVPWTT+I  Y+RAG H+ AFS    MRR  ++P+SVT L +L   L+LV LQCLHA  
Sbjct: 113 NVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTMLGLLSGVLELVHLQCLHACV 172

Query: 78  FRHGLESXXXXXXXXXXAYGRCGCV 4
            ++G  S           Y +CG V
Sbjct: 173 IQYGFGSDVALANSMLNVYCKCGRV 197


>emb|CBI23204.3| unnamed protein product [Vitis vinifera]
          Length = 907

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
 Frame = -1

Query: 252 SVVPWTTLIAAYSRAGCHETAFSFLRDMRRSDVRPNSVTFLSMLP--LDLVPLQCLHASA 79
           +VVPWTT+I  Y+RAG H+ AFS    MRR  ++P+SVT L +L   L+LV LQCLHA  
Sbjct: 113 NVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTMLGLLSGVLELVHLQCLHACV 172

Query: 78  FRHGLESXXXXXXXXXXAYGRCGCV 4
            ++G  S           Y +CG V
Sbjct: 173 IQYGFGSDVALANSMLNVYCKCGRV 197


>ref|XP_004295288.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Fragaria vesca subsp. vesca]
          Length = 748

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 38/95 (40%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
 Frame = -1

Query: 282 RLFDEIPLKFSVVPWTTLIAAYSRAGCHETAFSFLRDMRRSDVRPNSVTFLSML--PLDL 109
           ++FD +P + +VVPWT++I  YSRAG  E AF    +MR   + P+SVT LS+L    ++
Sbjct: 117 KVFDTMPERKNVVPWTSIIGCYSRAGSVEVAFGMFSEMRHDGIHPSSVTLLSLLSGASEV 176

Query: 108 VPLQCLHASAFRHGLESXXXXXXXXXXAYGRCGCV 4
             +QCLH  A  +G ES           Y +CG V
Sbjct: 177 AHVQCLHGCAVVYGFESDMCLVNSMLNVYCKCGRV 211


>gb|EMJ14151.1| hypothetical protein PRUPE_ppa022121mg [Prunus persica]
          Length = 701

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 41/95 (43%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
 Frame = -1

Query: 282 RLFDEIPLKFSVVPWTTLIAAYSRAGCHETAFSFLRDMRRSDVRPNSVTFLSMLP--LDL 109
           ++FD +P + +VVPWT++I  YSRAG    AF    DMRR  ++P+ VT LS+L    +L
Sbjct: 66  KVFDAMPER-NVVPWTSIIGCYSRAGNVGIAFDMFCDMRREGIQPSPVTLLSLLSGVTEL 124

Query: 108 VPLQCLHASAFRHGLESXXXXXXXXXXAYGRCGCV 4
             LQCLH  A  +G ES           YG+CG V
Sbjct: 125 TYLQCLHGCAVLYGFESDITLLNSILNVYGKCGRV 159


>ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Glycine max]
          Length = 755

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
 Frame = -1

Query: 282 RLFDEIPLKFSVVPWTTLIAAYSRAGCHETAFSFLRDMRRSDVRPNSVTFLSML--PLDL 109
           ++FD +P + +VVPWTT+I  YSR G    AFS   +MRR  ++P+SVT LS+L    +L
Sbjct: 117 KVFDYMPER-NVVPWTTIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTVLSLLFGVSEL 175

Query: 108 VPLQCLHASAFRHGLESXXXXXXXXXXAYGRCG 10
             +QCLH  A  +G  S           YG+CG
Sbjct: 176 AHVQCLHGCAILYGFMSDINLSNSMLNVYGKCG 208


>ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Glycine max]
          Length = 764

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 38/92 (41%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
 Frame = -1

Query: 282 RLFDEIPLKFSVVPWTTLIAAYSRAGCHETAFSFLRDMRRSDVRPNSVTFLSML--PLDL 109
           ++FD +P + +VVPWT++I  YSR G    AFS   +MRR  ++P+SVT LS+L    +L
Sbjct: 125 KVFDFMPER-NVVPWTSIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTMLSLLFGVSEL 183

Query: 108 VPLQCLHASAFRHGLESXXXXXXXXXXAYGRC 13
             +QCLH SA  +G  S           YG+C
Sbjct: 184 AHVQCLHGSAILYGFMSDINLSNSMLSMYGKC 215


>ref|XP_004486315.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Cicer arietinum]
          Length = 740

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 39/96 (40%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
 Frame = -1

Query: 282 RLFDEIPLKFSVVPWTTLIAAYSRAGCHETAFSFLRDMRRSDVRPNSVTFLSML--PLDL 109
           ++FD +P K +VVPWTT+I  YS+ G  + AFS    MR   ++P+SVT LS+L    +L
Sbjct: 109 KVFDFMPDK-NVVPWTTIIGCYSKMGNVDEAFSLFHQMRYQGIQPSSVTLLSLLFGVSEL 167

Query: 108 VPLQCLHASAFRHGLESXXXXXXXXXXAYGRCGCVA 1
             +QCLH  A   G  S           YG+CG +A
Sbjct: 168 SHVQCLHGCATFFGFMSDLNLSNSMLNLYGKCGSIA 203


>gb|ESW19690.1| hypothetical protein PHAVU_006G147000g [Phaseolus vulgaris]
          Length = 764

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 37/93 (39%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
 Frame = -1

Query: 282 RLFDEIPLKFSVVPWTTLIAAYSRAGCHETAFSFLRDMRRSDVRPNSVTFLSML--PLDL 109
           ++FD +P++ +VVPWTT+I  YSR G    AF     MRR  + P SVT LS+L    +L
Sbjct: 125 KVFDFMPVR-NVVPWTTIIGCYSRLGHVPEAFFLFDGMRRQGIPPTSVTMLSLLLGVSEL 183

Query: 108 VPLQCLHASAFRHGLESXXXXXXXXXXAYGRCG 10
             +QCLH     +G  S           YG+CG
Sbjct: 184 ATVQCLHGCVISYGFMSDTNLSNSMLNVYGKCG 216


>gb|EOY28770.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
          Length = 1250

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 38/95 (40%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
 Frame = -1

Query: 282 RLFDEIPLKFSVVPWTTLIAAYSRAGCHETAFSFLRDMRRSDVRPNSVTFLSML--PLDL 109
           ++FD+  L   VVPWT +I  Y R G    AFS L +MR + V P+ VTFLS+L   L++
Sbjct: 102 KVFDKT-LNRDVVPWTAIIGCYGRGGDVGNAFSMLNEMRYNGVEPSPVTFLSLLSGALEV 160

Query: 108 VPLQCLHASAFRHGLESXXXXXXXXXXAYGRCGCV 4
             +Q LH  A  +G ES          AY +CG +
Sbjct: 161 AQVQALHGCAVLYGFESDIAVGNSLLNAYSKCGSI 195


>ref|XP_004233783.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Solanum lycopersicum]
          Length = 753

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
 Frame = -1

Query: 282 RLFDEIPLKFSVVPWTTLIAAYSRAGCHETAFSFLRDMRRSDVRPNSVTFLSMLP--LDL 109
           ++FD +P + ++VPWTTLI  YSR G  E AF     M    ++P SVT L++L    + 
Sbjct: 119 KMFDTMPER-NIVPWTTLIGCYSRIGDFEHAFYLYNSMLHEGIKPTSVTVLTLLSGVSES 177

Query: 108 VPLQCLHASAFRHGLESXXXXXXXXXXAYGRCG 10
           + ++CLH    ++G              YG+CG
Sbjct: 178 IHVECLHTCIVKYGFMGHIALLNCMLNVYGKCG 210


>ref|XP_006348147.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like isoform X1 [Solanum tuberosum]
           gi|565362832|ref|XP_006348148.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g04370-like isoform X2 [Solanum tuberosum]
           gi|565362834|ref|XP_006348149.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g04370-like isoform X3 [Solanum tuberosum]
          Length = 753

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
 Frame = -1

Query: 282 RLFDEIPLKFSVVPWTTLIAAYSRAGCHETAFSFLRDMRRSDVRPNSVTFLSMLP--LDL 109
           ++FD +P + ++VPWTT+I  Y+R G  E AF     M +  ++P SVT L++L    + 
Sbjct: 119 KVFDTMPER-NIVPWTTVIGCYTRTGDFEHAFYLYNSMLQEGIKPTSVTLLTLLSGVSES 177

Query: 108 VPLQCLHASAFRHGLESXXXXXXXXXXAYGRCG 10
           + ++CLH    ++G              YG+CG
Sbjct: 178 IHVECLHTCIVKYGFMGHIALLNSMLNVYGKCG 210


>ref|XP_002874797.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297320634|gb|EFH51056.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 748

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
 Frame = -1

Query: 282 RLFDEIPLKFSVVPWTTLIAAYSRAGCHETAFSFLRDMRRSDVRPNSVTFLSMLP--LDL 109
           ++FDE+  +  VV WT +I  YSRAG    A S +++MR   ++P+ VTFL ML    ++
Sbjct: 102 KVFDEMRDR-DVVHWTAMIGCYSRAGIFGEACSLVKEMRFQGIKPSPVTFLEMLSGISEI 160

Query: 108 VPLQCLHASAFRHGLESXXXXXXXXXXAYGRC 13
             LQCLHA A  +G E            Y +C
Sbjct: 161 TQLQCLHAFALVYGFECDIAVMNSMLNLYCKC 192


>gb|EXB77045.1| hypothetical protein L484_014171 [Morus notabilis]
          Length = 746

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
 Frame = -1

Query: 282 RLFDEIPLKFSVVPWTTLIAAYSRAGCHETAFSFLRDMRRSDVRPNSVTFLSMLP--LDL 109
           ++FD++P + ++VPWT++I  YS  G  + A     +MR    +P+ VT LS+LP   +L
Sbjct: 113 KVFDDMPER-NIVPWTSIIGCYSCTGDVDQAVLLFSEMRHQGFQPSPVTLLSLLPGVSEL 171

Query: 108 VPLQCLHASAFRHGLESXXXXXXXXXXAYGRCG 10
             ++CLH  A  +G E            Y +CG
Sbjct: 172 AHVRCLHGCAVSYGFEGNVSLMNSILSVYSKCG 204


>ref|XP_006396695.1| hypothetical protein EUTSA_v10028467mg [Eutrema salsugineum]
           gi|557097712|gb|ESQ38148.1| hypothetical protein
           EUTSA_v10028467mg [Eutrema salsugineum]
          Length = 726

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 35/74 (47%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
 Frame = -1

Query: 282 RLFDEIPLKFSVVPWTTLIAAYSRAGCHETAFSFLRDMRRSDVRPNSVTFLSMLP--LDL 109
           +LFDE+  +  VV WTT+I  YSRAG     FS + +MR   V+P  VT L ML    ++
Sbjct: 102 KLFDEMRER-DVVHWTTMIGCYSRAGFVGEVFSLVNEMRYQGVKPGPVTLLEMLSGVSEI 160

Query: 108 VPLQCLHASAFRHG 67
           V LQCLHA A  +G
Sbjct: 161 VQLQCLHAFAVVYG 174


>gb|ABR16520.1| unknown [Picea sitchensis]
          Length = 644

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
 Frame = -1

Query: 282 RLFDEIPLKFSVVPWTTLIAAYSRAGCHETAFSFLRDMRRSDVRPNSVTFLSMLP--LDL 109
           R+FDE+P+K +VV WT +IAAY+R    + A  F  +M+   ++PN  TF S+LP   DL
Sbjct: 121 RVFDEMPVK-NVVSWTAMIAAYARHEHGQEALGFFYEMQDVGIQPNHFTFASILPACTDL 179

Query: 108 VPLQCLHASAFRHGLESXXXXXXXXXXAYGRCGCV 4
             L   H    + G ES           Y + GC+
Sbjct: 180 EVLGEFHDEIVKGGFESNVFVGNGLVDMYAKRGCI 214


>gb|EXC32781.1| hypothetical protein L484_019895 [Morus notabilis]
          Length = 549

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 5/97 (5%)
 Frame = -1

Query: 279 LFDEIPLKFSVVPWTTLIAAYSRAGCHETAFSFLRDMRRSDVRPNSVTFLSMLP----LD 112
           LF+E+P K S+V WT LI+ Y   GC+  A    R+M+  D+ P+ V+ +S+LP    L 
Sbjct: 207 LFEEMPDK-SIVSWTVLISGYVGIGCYSEALEIFREMQMLDIEPDEVSVISVLPACAQLG 265

Query: 111 LVPL-QCLHASAFRHGLESXXXXXXXXXXAYGRCGCV 4
           ++ + + +H  + ++GL             Y +CGC+
Sbjct: 266 VLEIGKWIHIYSDKNGLSRSTGVCNALIEMYAKCGCI 302


>gb|EXB40433.1| hypothetical protein L484_013736 [Morus notabilis]
          Length = 640

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 39/93 (41%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
 Frame = -1

Query: 282 RLFDEIPLKFSVVPWTTLIAAYSRAGCHETAFSFLRDMRRSDVRPNSVTFLSMLPL--DL 109
           +LFD +P + +VV WTT+IAAYS A  +E A  FL  M R  V PN  T+ S+L     L
Sbjct: 127 KLFDIMPER-NVVSWTTIIAAYSNAKLNERALEFLVLMLRDGVMPNMFTYSSVLRACDGL 185

Query: 108 VPLQCLHASAFRHGLESXXXXXXXXXXAYGRCG 10
             L+ LH S F+ GLES           Y + G
Sbjct: 186 WNLRQLHCSIFKAGLESDVFVRSALIDVYSKLG 218


>ref|XP_002522430.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538315|gb|EEF39922.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 556

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 33/87 (37%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
 Frame = -1

Query: 249 VVPWTTLIAAYSRAGCHETAFSFLRDMRRSDVRPNSVTFLSMLPL-----DLVPLQCLHA 85
           VV W+T+IA YS+ GC E AF +L  MRR   +PN +T  S+L +      L   + LHA
Sbjct: 383 VVSWSTIIAGYSQGGCAEEAFEYLSRMRREGPKPNELTLASVLSVCGNMAILEQGKQLHA 442

Query: 84  SAFRHGLESXXXXXXXXXXAYGRCGCV 4
            A   GLE            Y +CG +
Sbjct: 443 HALHVGLEQTAMIQSALINMYSKCGSI 469