BLASTX nr result
ID: Zingiber23_contig00040106
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00040106
(417 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AHG94942.1| ORF3, partial [Dioscorea bacilliform virus] 82 5e-19
ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]... 87 1e-18
emb|CAG70342.1| CP, RT, RNaseH and protease polyprotein [Cacao s... 87 1e-18
gb|AFM82591.1| polyprotein [Cacao swollen shoot virus] 85 3e-18
emb|CAE76628.1| polyprotein [Cacao swollen shoot virus] 88 3e-18
emb|CAE81285.1| polyprotein [Cacao swollen shoot virus] 88 4e-18
ref|YP_008567619.1| ORF3 [Piper yellow mottle virus] gi|54035746... 95 1e-17
emb|CAE81279.1| polyprotein [Cacao swollen shoot virus] 86 2e-17
ref|NP_041734.1| polyprotein [Cacao swollen shoot virus] gi|3478... 85 6e-17
emb|CAD59232.1| polyprotein [Cacao swollen shoot virus] 85 8e-17
ref|YP_006273075.1| polyprotein [Fig badnavirus 1] gi|333493962|... 77 2e-16
ref|YP_001036293.1| ORF3 protein [Dioscorea bacilliform virus] g... 75 4e-16
gb|ABI47986.1| ORF3 protein [Dioscorea bacilliform virus] 75 4e-16
gb|ACB87156.1| polyprotein [Citrus yellow mosaic virus] 79 2e-14
gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus] 79 2e-14
emb|CAA64270.1| unnamed protein product [Dioscorea bacilliform v... 66 2e-14
emb|CAA64271.1| unnamed protein product [Dioscorea bacilliform v... 66 2e-14
gb|ACB87150.1| polyprotein [Citrus yellow mosaic virus] 79 3e-14
gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus] 79 3e-14
gb|ACH86211.1| unknown [Citrus yellow mosaic virus] 76 3e-14
>gb|AHG94942.1| ORF3, partial [Dioscorea bacilliform virus]
Length = 1395
Score = 81.6 bits (200), Expect(2) = 5e-19
Identities = 39/73 (53%), Positives = 54/73 (73%)
Frame = -2
Query: 221 GGHFKQKDPTEW*NLPSAHQQTGALLTLPTQLGRMEDVFLRWEGITKNVVALQNFTDTQD 42
G HF+ +D + +LPSA Q TGA+ LP +L + ++VF RWE ITKN+V+ Q+F ++
Sbjct: 129 GVHFRARDYSNNWSLPSAQQNTGAMFYLPLELVKFDEVFSRWESITKNLVSQQSFITGKE 188
Query: 41 KADFIENLLGETE 3
KA+FIENLLGETE
Sbjct: 189 KAEFIENLLGETE 201
Score = 38.1 bits (87), Expect(2) = 5e-19
Identities = 22/42 (52%), Positives = 26/42 (61%)
Frame = -3
Query: 406 DNNWLLDYPQLQQVAEQIYSQEAIS*YRVPADATMNLVGYPP 281
D++ LDYP LQ++ I S AIS YR P D TMN YPP
Sbjct: 56 DSSLDLDYPTLQRLEATIASS-AISEYRPPEDTTMNPPTYPP 96
>ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]
gi|584388573|gb|AHI90954.1| polyprotein [Hibiscus
bacilliform virus GD1]
Length = 1892
Score = 87.0 bits (214), Expect(2) = 1e-18
Identities = 41/70 (58%), Positives = 50/70 (71%)
Frame = -2
Query: 212 FKQKDPTEW*NLPSAHQQTGALLTLPTQLGRMEDVFLRWEGITKNVVALQNFTDTQDKAD 33
FKQ TE+ P+A QTGA+ +P Q+G D F RWE ITKN VA Q FTD++DKA+
Sbjct: 567 FKQDRSTEYWQFPTAQGQTGAMFVIPRQIGLFHDAFNRWESITKNYVASQGFTDSKDKAE 626
Query: 32 FIENLLGETE 3
F+ENLLGETE
Sbjct: 627 FMENLLGETE 636
Score = 31.2 bits (69), Expect(2) = 1e-18
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
Frame = -3
Query: 415 VIDDNNWLLDYPQLQQVA---EQIYS--QEAIS*YRVPADATMNLVGYPP 281
+I ++ LL YP L+++ E+++S Q +S YR P D M GY P
Sbjct: 494 MIQEDPDLLPYPHLRELLKNEEKVFSTQQSEVSSYRPPQDTAMTPAGYAP 543
>emb|CAG70342.1| CP, RT, RNaseH and protease polyprotein [Cacao swollen shoot virus]
Length = 1868
Score = 87.4 bits (215), Expect(2) = 1e-18
Identities = 46/84 (54%), Positives = 53/84 (63%), Gaps = 3/84 (3%)
Frame = -2
Query: 245 PPLEPGRKGG---HFKQKDPTEW*NLPSAHQQTGALLTLPTQLGRMEDVFLRWEGITKNV 75
PPL GR K+ D TEW LPS+ TGAL +P Q+G +VF RWE ITKN
Sbjct: 534 PPLYEGRMPHAPRFLKRDDYTEWWQLPSSQGTTGALFVMPRQVGLFHEVFSRWESITKNY 593
Query: 74 VALQNFTDTQDKADFIENLLGETE 3
VA Q FTD +K +FIENLLGETE
Sbjct: 594 VAAQGFTDPVEKMEFIENLLGETE 617
Score = 30.8 bits (68), Expect(2) = 1e-18
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = -3
Query: 415 VIDDNNWLLDYPQL--QQVAEQIYSQEAIS*YRVPADATMNLVGYPP 281
+I N ++YPQ QQ +YS+ A Y P D M VGYPP
Sbjct: 476 IIAGINSEMEYPQRRPQQTETVVYSETAD--YTPPGDTVMTPVGYPP 520
>gb|AFM82591.1| polyprotein [Cacao swollen shoot virus]
Length = 1872
Score = 85.1 bits (209), Expect(2) = 3e-18
Identities = 44/84 (52%), Positives = 52/84 (61%), Gaps = 3/84 (3%)
Frame = -2
Query: 245 PPLEPGR---KGGHFKQKDPTEW*NLPSAHQQTGALLTLPTQLGRMEDVFLRWEGITKNV 75
PPL GR ++ D TEW LPS+ TGAL +P Q+G DVF RWE ITKN
Sbjct: 536 PPLYEGRIPSASRVLRRDDYTEWWQLPSSQGTTGALFVMPKQIGLFHDVFSRWESITKNY 595
Query: 74 VALQNFTDTQDKADFIENLLGETE 3
V+ Q TD +K +FIENLLGETE
Sbjct: 596 VSAQGITDPTEKMEFIENLLGETE 619
Score = 32.0 bits (71), Expect(2) = 3e-18
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -3
Query: 415 VIDDNNWLLDYPQLQ-QVAEQIYSQEAIS*YRVPADATMNLVGYPP 281
+I N ++YPQ + +VAE ++S+ I Y P D M VGYPP
Sbjct: 479 IIASLNPEMEYPQRRTEVAETVFSE--IVDYTPPGDTLMTPVGYPP 522
>emb|CAE76628.1| polyprotein [Cacao swollen shoot virus]
Length = 1847
Score = 88.2 bits (217), Expect(2) = 3e-18
Identities = 46/84 (54%), Positives = 54/84 (64%), Gaps = 3/84 (3%)
Frame = -2
Query: 245 PPLEPGRKGG---HFKQKDPTEW*NLPSAHQQTGALLTLPTQLGRMEDVFLRWEGITKNV 75
PPL GR K+ D TEW LPS+ TGAL +P Q+G DVF RWE ITKN
Sbjct: 508 PPLFEGRVTHVPRFLKRDDYTEWWQLPSSQGTTGALFVMPKQIGLFHDVFSRWESITKNY 567
Query: 74 VALQNFTDTQDKADFIENLLGETE 3
VA Q+FTD +K +F+ENLLGETE
Sbjct: 568 VAAQSFTDPTEKMEFMENLLGETE 591
Score = 28.9 bits (63), Expect(2) = 3e-18
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 391 LDYPQLQQVAEQIYSQEAIS*YRVPADATMNLVGYPP 281
++YP+ + E ++S+ Y P D M VGYPP
Sbjct: 460 MEYPRRRPQTETVFSETVD--YTPPGDTLMTPVGYPP 494
>emb|CAE81285.1| polyprotein [Cacao swollen shoot virus]
Length = 1770
Score = 87.8 bits (216), Expect(2) = 4e-18
Identities = 46/84 (54%), Positives = 53/84 (63%), Gaps = 3/84 (3%)
Frame = -2
Query: 245 PPLEPGRKGG---HFKQKDPTEW*NLPSAHQQTGALLTLPTQLGRMEDVFLRWEGITKNV 75
PPL GR K+ D TEW LPS+ TGAL +P Q+G DVF RWE ITKN
Sbjct: 431 PPLFEGRVTHVPRFLKRDDYTEWWQLPSSQGTTGALFVMPKQMGLFHDVFSRWESITKNY 490
Query: 74 VALQNFTDTQDKADFIENLLGETE 3
VA Q FTD +K +F+ENLLGETE
Sbjct: 491 VAAQGFTDPTEKMEFMENLLGETE 514
Score = 28.9 bits (63), Expect(2) = 4e-18
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 391 LDYPQLQQVAEQIYSQEAIS*YRVPADATMNLVGYPP 281
++YP+ + E ++S+ Y P D M VGYPP
Sbjct: 383 MEYPRRRPQTETVFSETVD--YTPPGDTLMTPVGYPP 417
>ref|YP_008567619.1| ORF3 [Piper yellow mottle virus] gi|540357465|gb|AGV08293.1| ORF3
[Piper yellow mottle virus]
Length = 1925
Score = 94.7 bits (234), Expect = 1e-17
Identities = 50/97 (51%), Positives = 60/97 (61%), Gaps = 5/97 (5%)
Frame = -2
Query: 278 HPKA*PVSNISPPLEP-----GRKGGHFKQKDPTEW*NLPSAHQQTGALLTLPTQLGRME 114
+P A ++N + P P + G FK KD + LPSA QQ GA+ +PTQLG +
Sbjct: 596 YPPAVNITNEAGPSRPMFEGYNKSGVRFKHKDLADNWTLPSAQQQQGAVFVIPTQLGLFD 655
Query: 113 DVFLRWEGITKNVVALQNFTDTQDKADFIENLLGETE 3
VF RWE ITKN+VA Q FTD DK DFIENLLGE E
Sbjct: 656 SVFARWESITKNLVAAQGFTDPADKVDFIENLLGEAE 692
>emb|CAE81279.1| polyprotein [Cacao swollen shoot virus]
Length = 1816
Score = 86.3 bits (212), Expect(2) = 2e-17
Identities = 45/84 (53%), Positives = 53/84 (63%), Gaps = 3/84 (3%)
Frame = -2
Query: 245 PPLEPGRKGG---HFKQKDPTEW*NLPSAHQQTGALLTLPTQLGRMEDVFLRWEGITKNV 75
PPL GR K+ D TEW LPS+ TGAL +P Q+G +VF RWE ITKN
Sbjct: 507 PPLFEGRVTHVPRFLKRDDYTEWWQLPSSQGTTGALFVMPKQMGLFHEVFSRWESITKNY 566
Query: 74 VALQNFTDTQDKADFIENLLGETE 3
VA Q FTD +K +F+ENLLGETE
Sbjct: 567 VAAQGFTDPTEKMEFMENLLGETE 590
Score = 28.5 bits (62), Expect(2) = 2e-17
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 391 LDYPQLQQVAEQIYSQEAIS*YRVPADATMNLVGYPP 281
++YP+ + E ++S+ Y P D M VGYPP
Sbjct: 459 MEYPRRRPRTETVFSETVD--YTPPGDTLMTPVGYPP 493
>ref|NP_041734.1| polyprotein [Cacao swollen shoot virus] gi|347871|gb|AAA03171.1|
polyprotein [Cacao swollen shoot virus]
Length = 1834
Score = 85.1 bits (209), Expect(2) = 6e-17
Identities = 44/84 (52%), Positives = 53/84 (63%), Gaps = 3/84 (3%)
Frame = -2
Query: 245 PPLEPGRKGG---HFKQKDPTEW*NLPSAHQQTGALLTLPTQLGRMEDVFLRWEGITKNV 75
PPL GR K+ + TEW LPS+ TGAL +P Q+G +VF RWE ITKN
Sbjct: 503 PPLFEGRTTHVPRFLKRDEYTEWWQLPSSQGTTGALFVMPKQMGLFHEVFSRWESITKNY 562
Query: 74 VALQNFTDTQDKADFIENLLGETE 3
VA Q FTD +K +F+ENLLGETE
Sbjct: 563 VAAQGFTDPTEKMEFMENLLGETE 586
Score = 27.7 bits (60), Expect(2) = 6e-17
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -3
Query: 391 LDYPQLQQVAEQIYSQEAIS*YRVPADATMNLVGYPP 281
++YP+ + E +S+ Y P D M VGYPP
Sbjct: 455 MEYPKRRPQTEMAFSETVD--YTPPGDTMMTPVGYPP 489
>emb|CAD59232.1| polyprotein [Cacao swollen shoot virus]
Length = 1839
Score = 85.1 bits (209), Expect(2) = 8e-17
Identities = 44/84 (52%), Positives = 53/84 (63%), Gaps = 3/84 (3%)
Frame = -2
Query: 245 PPLEPGRKGG---HFKQKDPTEW*NLPSAHQQTGALLTLPTQLGRMEDVFLRWEGITKNV 75
PPL GR K+ + TEW LPS+ TGAL +P Q+G +VF RWE ITKN
Sbjct: 503 PPLFEGRTTHVPRFLKRDEYTEWWQLPSSQGTTGALFVMPKQMGLFHEVFSRWESITKNY 562
Query: 74 VALQNFTDTQDKADFIENLLGETE 3
VA Q FTD +K +F+ENLLGETE
Sbjct: 563 VAAQGFTDPTEKMEFMENLLGETE 586
Score = 27.3 bits (59), Expect(2) = 8e-17
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -3
Query: 391 LDYPQLQQVAEQIYSQEAIS*YRVPADATMNLVGYPP 281
++YP+ + E +S+ Y P D M VGYPP
Sbjct: 455 MEYPKRRPQTETAFSETVD--YTPPGDTMMTPVGYPP 489
>ref|YP_006273075.1| polyprotein [Fig badnavirus 1] gi|333493962|gb|AEF56561.1|
polyprotein [Fig badnavirus 1]
Length = 1837
Score = 77.4 bits (189), Expect(2) = 2e-16
Identities = 43/90 (47%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Frame = -2
Query: 263 PVSNISPPLEPGRKGG---HFKQKDPTEW*NLPSAHQQTGALLTLPTQLGRMEDVFLRWE 93
P S EP R FK E LPSA Q+ GA+ +P QLG D F RWE
Sbjct: 523 PGGGASSSAEPPRFDAARTRFKGGYNDEMWTLPSAQQKNGAMFVIPEQLGLFNDAFSRWE 582
Query: 92 GITKNVVALQNFTDTQDKADFIENLLGETE 3
+TKN VA Q FTDT+DK ++ENLLGE E
Sbjct: 583 SVTKNHVATQGFTDTRDKIKYMENLLGEIE 612
Score = 33.5 bits (75), Expect(2) = 2e-16
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -3
Query: 403 NNWLLDYPQLQQVAEQIYS-QEAIS*YRVPADATMNLVGYPP 281
N+ +DYPQ + E++ S E S YR P DA M YPP
Sbjct: 477 NSEEMDYPQRMKKIEKLLSTSEVTSPYRPPEDAAMGRPSYPP 518
>ref|YP_001036293.1| ORF3 protein [Dioscorea bacilliform virus]
gi|113901272|gb|ABI47983.1| ORF3 protein [Dioscorea
bacilliform virus]
Length = 1887
Score = 75.1 bits (183), Expect(2) = 4e-16
Identities = 36/73 (49%), Positives = 49/73 (67%)
Frame = -2
Query: 221 GGHFKQKDPTEW*NLPSAHQQTGALLTLPTQLGRMEDVFLRWEGITKNVVALQNFTDTQD 42
G FK + + LPSA Q TGA+ +P +L + ++VF RWE ITKN+ + +F ++
Sbjct: 652 GTRFKPMNYSANLQLPSAQQTTGAMFYMPLELDKFDEVFSRWESITKNITSQHSFISGRE 711
Query: 41 KADFIENLLGETE 3
KADFIENLLGETE
Sbjct: 712 KADFIENLLGETE 724
Score = 35.0 bits (79), Expect(2) = 4e-16
Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = -3
Query: 388 DYPQLQQVAE-QIYSQEAIS*YRVPADATMNLVGYPP 281
DYPQL+Q+ + I + A+S Y P D TMN YPP
Sbjct: 596 DYPQLRQLEDCVIAASSAVSNYTPPEDTTMNPPTYPP 632
>gb|ABI47986.1| ORF3 protein [Dioscorea bacilliform virus]
Length = 1295
Score = 75.1 bits (183), Expect(2) = 4e-16
Identities = 36/73 (49%), Positives = 49/73 (67%)
Frame = -2
Query: 221 GGHFKQKDPTEW*NLPSAHQQTGALLTLPTQLGRMEDVFLRWEGITKNVVALQNFTDTQD 42
G FK + + LPSA Q TGA+ +P +L + ++VF RWE ITKN+ + +F ++
Sbjct: 652 GTRFKPMNYSANLQLPSAQQTTGAMFYMPLELDKFDEVFSRWESITKNITSQHSFISGRE 711
Query: 41 KADFIENLLGETE 3
KADFIENLLGETE
Sbjct: 712 KADFIENLLGETE 724
Score = 35.0 bits (79), Expect(2) = 4e-16
Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = -3
Query: 388 DYPQLQQVAE-QIYSQEAIS*YRVPADATMNLVGYPP 281
DYPQL+Q+ + I + A+S Y P D TMN YPP
Sbjct: 596 DYPQLRQLEDCVIAASSAVSNYTPPEDTTMNPPTYPP 632
>gb|ACB87156.1| polyprotein [Citrus yellow mosaic virus]
Length = 1979
Score = 79.0 bits (193), Expect(2) = 2e-14
Identities = 41/74 (55%), Positives = 50/74 (67%)
Frame = -2
Query: 224 KGGHFKQKDPTEW*NLPSAHQQTGALLTLPTQLGRMEDVFLRWEGITKNVVALQNFTDTQ 45
K HFK+ + T + +LPSA Q TGAL +P Q+G +VF WE ITK VA Q TD +
Sbjct: 645 KRPHFKRDNHT-FISLPSAQQNTGALFIMPQQIGLFHEVFTSWEAITKAYVAQQGITDPR 703
Query: 44 DKADFIENLLGETE 3
DKADFIEN+LG TE
Sbjct: 704 DKADFIENMLGPTE 717
Score = 25.0 bits (53), Expect(2) = 2e-14
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -3
Query: 340 AIS*YRVPADATMNLVGYPP 281
AIS Y P+D M V YPP
Sbjct: 602 AISSYTPPSDTAMTPVAYPP 621
>gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus]
Length = 1967
Score = 78.6 bits (192), Expect(2) = 2e-14
Identities = 48/98 (48%), Positives = 60/98 (61%), Gaps = 4/98 (4%)
Frame = -2
Query: 284 PYHPKA*PVSNISP--PLEPGR--KGGHFKQKDPTEW*NLPSAHQQTGALLTLPTQLGRM 117
P A P N+SP P+ G K +FK+ + T + +LPSA Q TGAL +P Q+G
Sbjct: 613 PAQNVASPSYNLSPQMPMFEGYSPKRPNFKRDNHT-FISLPSAQQNTGALFIMPQQIGLF 671
Query: 116 EDVFLRWEGITKNVVALQNFTDTQDKADFIENLLGETE 3
+VF WE ITK VA Q TD +DKADFIEN+LG TE
Sbjct: 672 HEVFTSWEAITKAYVAQQGITDPKDKADFIENMLGPTE 709
Score = 25.4 bits (54), Expect(2) = 2e-14
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -3
Query: 379 QLQQVAEQIYSQEAIS*YRVPADATMNLVGYPP 281
+L+ E++ S AIS Y P D M V YPP
Sbjct: 582 RLKPKTEKVLSS-AISSYTPPRDTAMTPVAYPP 613
>emb|CAA64270.1| unnamed protein product [Dioscorea bacilliform virus]
Length = 430
Score = 65.9 bits (159), Expect(2) = 2e-14
Identities = 31/64 (48%), Positives = 45/64 (70%)
Frame = -2
Query: 221 GGHFKQKDPTEW*NLPSAHQQTGALLTLPTQLGRMEDVFLRWEGITKNVVALQNFTDTQD 42
G HF+ +D + +LPSA Q TGA+ LP +L + ++VF RWE ITKNVV+ Q+F ++
Sbjct: 367 GVHFRARDYSNNWSLPSAQQNTGAMFYLPLELVKFDEVFSRWESITKNVVSQQSFITGKE 426
Query: 41 KADF 30
KA+F
Sbjct: 427 KAEF 430
Score = 38.1 bits (87), Expect(2) = 2e-14
Identities = 22/42 (52%), Positives = 26/42 (61%)
Frame = -3
Query: 406 DNNWLLDYPQLQQVAEQIYSQEAIS*YRVPADATMNLVGYPP 281
D++ LDYP LQ++ I S AIS YR P D TMN YPP
Sbjct: 293 DSSLELDYPTLQKLEATIAST-AISEYRPPEDTTMNPPTYPP 333
>emb|CAA64271.1| unnamed protein product [Dioscorea bacilliform virus]
Length = 430
Score = 65.9 bits (159), Expect(2) = 2e-14
Identities = 31/64 (48%), Positives = 45/64 (70%)
Frame = -2
Query: 221 GGHFKQKDPTEW*NLPSAHQQTGALLTLPTQLGRMEDVFLRWEGITKNVVALQNFTDTQD 42
G HF+ +D + +LPSA Q TGA+ LP +L + ++VF RWE ITKNVV+ Q+F ++
Sbjct: 367 GVHFRARDYSNNWSLPSAQQNTGAMFYLPLELVKFDEVFSRWESITKNVVSQQSFITGKE 426
Query: 41 KADF 30
KA+F
Sbjct: 427 KAEF 430
Score = 38.1 bits (87), Expect(2) = 2e-14
Identities = 22/42 (52%), Positives = 26/42 (61%)
Frame = -3
Query: 406 DNNWLLDYPQLQQVAEQIYSQEAIS*YRVPADATMNLVGYPP 281
D++ LDYP LQ++ I S AIS YR P D TMN YPP
Sbjct: 293 DSSLELDYPTLQKLEATIAST-AISEYRPPEDTTMNPPTYPP 333
>gb|ACB87150.1| polyprotein [Citrus yellow mosaic virus]
Length = 1976
Score = 78.6 bits (192), Expect(2) = 3e-14
Identities = 41/74 (55%), Positives = 50/74 (67%)
Frame = -2
Query: 224 KGGHFKQKDPTEW*NLPSAHQQTGALLTLPTQLGRMEDVFLRWEGITKNVVALQNFTDTQ 45
K HFK+ + T + +LPSA Q TGAL +P Q+G +VF WE ITK VA Q TD +
Sbjct: 645 KRPHFKRDNHT-FISLPSAQQNTGALFIMPQQIGLSHEVFTSWEAITKAYVAQQGITDPR 703
Query: 44 DKADFIENLLGETE 3
DKADFIEN+LG TE
Sbjct: 704 DKADFIENMLGPTE 717
Score = 25.0 bits (53), Expect(2) = 3e-14
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -3
Query: 340 AIS*YRVPADATMNLVGYPP 281
AIS Y P+D M V YPP
Sbjct: 602 AISSYTPPSDTAMTPVAYPP 621
>gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus]
Length = 1968
Score = 79.3 bits (194), Expect(2) = 3e-14
Identities = 49/98 (50%), Positives = 59/98 (60%), Gaps = 4/98 (4%)
Frame = -2
Query: 284 PYHPKA*PVSNISP--PLEPGR--KGGHFKQKDPTEW*NLPSAHQQTGALLTLPTQLGRM 117
P A P N SP P+ G K +FK +D + +LPSAHQ TGAL +P Q+G
Sbjct: 614 PAQNVAGPSYNPSPQMPMFEGYYPKRPNFK-RDNHAFISLPSAHQSTGALFLMPQQIGLF 672
Query: 116 EDVFLRWEGITKNVVALQNFTDTQDKADFIENLLGETE 3
+VF WE ITK VA Q TD +DKADFIEN+LG TE
Sbjct: 673 HEVFTSWEAITKAYVAQQGITDPKDKADFIENMLGPTE 710
Score = 24.3 bits (51), Expect(2) = 3e-14
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 340 AIS*YRVPADATMNLVGYPP 281
AIS Y P D M V YPP
Sbjct: 595 AISSYTPPRDTAMTPVAYPP 614
>gb|ACH86211.1| unknown [Citrus yellow mosaic virus]
Length = 1490
Score = 76.3 bits (186), Expect(2) = 3e-14
Identities = 48/98 (48%), Positives = 58/98 (59%), Gaps = 4/98 (4%)
Frame = -2
Query: 284 PYHPKA*PVSNISP--PLEPGR--KGGHFKQKDPTEW*NLPSAHQQTGALLTLPTQLGRM 117
P A P N SP P+ G K +FK +D + +LPSA Q TGAL +P Q+G
Sbjct: 137 PAQNVASPSYNPSPQMPMFEGYYPKRPNFK-RDNHAFISLPSAQQNTGALFIMPQQIGLF 195
Query: 116 EDVFLRWEGITKNVVALQNFTDTQDKADFIENLLGETE 3
+VF WE ITK VA Q TD +DKADFIEN+LG TE
Sbjct: 196 HEVFTSWEAITKAYVAQQGITDPKDKADFIENMLGPTE 233
Score = 27.3 bits (59), Expect(2) = 3e-14
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -3
Query: 379 QLQQVAEQIYSQEAIS*YRVPADATMNLVGYPP 281
QL+ E++ S AIS Y P D M V YPP
Sbjct: 106 QLKPKTEKVLSS-AISSYNPPRDTAMTPVAYPP 137