BLASTX nr result

ID: Zingiber23_contig00040025 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00040025
         (253 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004171597.1| PREDICTED: LOW QUALITY PROTEIN: chaperonin C...    56   4e-06
ref|XP_004141682.1| PREDICTED: LOW QUALITY PROTEIN: chaperonin C...    56   4e-06

>ref|XP_004171597.1| PREDICTED: LOW QUALITY PROTEIN: chaperonin CPN60-like 2,
           mitochondrial-like [Cucumis sativus]
          Length = 842

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
 Frame = -3

Query: 251 NPNKKLAYLYDPITISVVSGGADIGDGSFPAFAQASGSVTRLXXXXXXXXXXXXXATASE 72
           NPNKK+ ++Y PI+++V+S G D+GDGSFP F     + T +              +   
Sbjct: 127 NPNKKVKFIYSPISVAVLSNGVDVGDGSFPEFVHEKRNTTAMKVTVESSGGEIEGESVDS 186

Query: 71  LRRS--SXXXXXXXVEMETKAGVKI 3
           L+ +  S       VEMETK  VK+
Sbjct: 187 LKAAVKSKSGLPLEVEMETKVKVKM 211


>ref|XP_004141682.1| PREDICTED: LOW QUALITY PROTEIN: chaperonin CPN60-like 2,
           mitochondrial-like [Cucumis sativus]
          Length = 980

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
 Frame = -3

Query: 251 NPNKKLAYLYDPITISVVSGGADIGDGSFPAFAQASGSVTRLXXXXXXXXXXXXXATASE 72
           NPNKK+ ++Y PI+++V+S G D+GDGSFP F     + T +              +   
Sbjct: 127 NPNKKVKFIYSPISVAVLSNGVDVGDGSFPEFVHEKRNTTAMKVTVESSGGEIEGESVDS 186

Query: 71  LRRS--SXXXXXXXVEMETKAGVKI 3
           L+ +  S       VEMETK  VK+
Sbjct: 187 LKAAVKSKSGLPLEVEMETKVKVKM 211


Top