BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00039839
         (377 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003578378.1| PREDICTED: E3 ubiquitin-protein ligase compl...    74   3e-11
ref|NP_001063596.2| Os09g0504700 [Oryza sativa Japonica Group] g...    73   3e-11
gb|EEC72046.1| hypothetical protein OsI_04952 [Oryza sativa Indi...    72   6e-11
ref|NP_001045211.1| Os01g0919500 [Oryza sativa Japonica Group] g...    72   6e-11
ref|XP_006645237.1| PREDICTED: uncharacterized protein LOC102704...    72   8e-11
gb|EMT32958.1| RING finger protein 4 [Aegilops tauschii]               72   1e-10
gb|EMS67995.1| E3 ubiquitin ligase RNF4 [Triticum urartu]              72   1e-10
dbj|BAJ87005.1| predicted protein [Hordeum vulgare subsp. vulgar...    70   2e-10
dbj|BAJ86661.1| predicted protein [Hordeum vulgare subsp. vulgar...    70   3e-10
ref|XP_006660807.1| PREDICTED: E3 ubiquitin-protein ligase RNF4-...    69   6e-10
gb|EMT26068.1| E3 ubiquitin-protein ligase BRE1A [Aegilops tausc...    67   2e-09
gb|EMS66011.1| E3 ubiquitin-protein ligase BRE1A [Triticum urartu]     67   2e-09
gb|AEE81066.1| ubiquitin-protein ligase/zinc ion binding protein...    67   2e-09
gb|ABK23508.1| unknown [Picea sitchensis] gi|224284637|gb|ACN400...    67   2e-09
tpg|DAA40463.1| TPA: putative RING zinc finger domain superfamil...    67   2e-09
tpg|DAA40459.1| TPA: putative RING zinc finger domain superfamil...    67   2e-09
ref|XP_003564936.1| PREDICTED: uncharacterized protein LOC100845...    67   2e-09
gb|ACF86603.1| unknown [Zea mays] gi|195626322|gb|ACG34991.1| ub...    67   2e-09
ref|NP_001132715.1| uncharacterized protein LOC100194198 [Zea ma...    67   2e-09
tpg|DAA62195.1| TPA: putative RING zinc finger domain superfamil...    66   5e-09

>ref|XP_003578378.1| PREDICTED: E3 ubiquitin-protein ligase complex slx8-rfp subunit
           slx8-like [Brachypodium distachyon]
          Length = 197

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 28/40 (70%), Positives = 33/40 (82%)
 Frame = -2

Query: 376 ICGHIFCVTCTKSFIRIQKKCPTCRRKLNMRNFHRVYLPN 257
           ICGHIFC +C K  I++QKKCPTCR+ L M NFHR+YLPN
Sbjct: 153 ICGHIFCTSCIKQSIQVQKKCPTCRKSLRMNNFHRIYLPN 192


>ref|NP_001063596.2| Os09g0504700 [Oryza sativa Japonica Group]
           gi|215678960|dbj|BAG96390.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215707233|dbj|BAG93693.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|255679040|dbj|BAF25510.2| Os09g0504700 [Oryza sativa
           Japonica Group]
          Length = 191

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 29/40 (72%), Positives = 32/40 (80%)
 Frame = -2

Query: 376 ICGHIFCVTCTKSFIRIQKKCPTCRRKLNMRNFHRVYLPN 257
           ICGHIFC TC K  I+IQKKCPTCR+ L   NFHR+YLPN
Sbjct: 149 ICGHIFCTTCIKQAIQIQKKCPTCRKSLRANNFHRIYLPN 188


>gb|EEC72046.1| hypothetical protein OsI_04952 [Oryza sativa Indica Group]
          Length = 241

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 30/40 (75%), Positives = 33/40 (82%)
 Frame = -2

Query: 376 ICGHIFCVTCTKSFIRIQKKCPTCRRKLNMRNFHRVYLPN 257
           ICGHIFC  C K+ I+ QKKCPTCRRKL M NFHRVYLP+
Sbjct: 200 ICGHIFCKQCIKASIQAQKKCPTCRRKLTMNNFHRVYLPS 239


>ref|NP_001045211.1| Os01g0919500 [Oryza sativa Japonica Group]
           gi|57899845|dbj|BAD87629.1| unknown protein [Oryza
           sativa Japonica Group] gi|113534742|dbj|BAF07125.1|
           Os01g0919500 [Oryza sativa Japonica Group]
           gi|215740758|dbj|BAG97414.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215765198|dbj|BAG86895.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222619766|gb|EEE55898.1| hypothetical protein
           OsJ_04562 [Oryza sativa Japonica Group]
          Length = 241

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 30/40 (75%), Positives = 33/40 (82%)
 Frame = -2

Query: 376 ICGHIFCVTCTKSFIRIQKKCPTCRRKLNMRNFHRVYLPN 257
           ICGHIFC  C K+ I+ QKKCPTCRRKL M NFHRVYLP+
Sbjct: 200 ICGHIFCKQCIKASIQAQKKCPTCRRKLTMNNFHRVYLPS 239


>ref|XP_006645237.1| PREDICTED: uncharacterized protein LOC102704572 [Oryza brachyantha]
          Length = 240

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 30/39 (76%), Positives = 32/39 (82%)
 Frame = -2

Query: 376 ICGHIFCVTCTKSFIRIQKKCPTCRRKLNMRNFHRVYLP 260
           ICGHIFC  C K+ I+ QKKCPTCRRKL M NFHRVYLP
Sbjct: 199 ICGHIFCKLCIKASIQAQKKCPTCRRKLTMNNFHRVYLP 237


>gb|EMT32958.1| RING finger protein 4 [Aegilops tauschii]
          Length = 260

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 30/39 (76%), Positives = 32/39 (82%)
 Frame = -2

Query: 376 ICGHIFCVTCTKSFIRIQKKCPTCRRKLNMRNFHRVYLP 260
           ICGHIFC  C K+ I+ QKKCPTCRRKL M NFHRVYLP
Sbjct: 218 ICGHIFCQKCIKASIQAQKKCPTCRRKLTMSNFHRVYLP 256


>gb|EMS67995.1| E3 ubiquitin ligase RNF4 [Triticum urartu]
          Length = 260

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 30/39 (76%), Positives = 32/39 (82%)
 Frame = -2

Query: 376 ICGHIFCVTCTKSFIRIQKKCPTCRRKLNMRNFHRVYLP 260
           ICGHIFC  C K+ I+ QKKCPTCRRKL M NFHRVYLP
Sbjct: 218 ICGHIFCQKCIKASIQAQKKCPTCRRKLTMSNFHRVYLP 256


>dbj|BAJ87005.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326525537|dbj|BAJ88815.1| predicted protein [Hordeum
           vulgare subsp. vulgare] gi|326532854|dbj|BAJ89272.1|
           predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 210

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 27/40 (67%), Positives = 31/40 (77%)
 Frame = -2

Query: 376 ICGHIFCVTCTKSFIRIQKKCPTCRRKLNMRNFHRVYLPN 257
           +CGHIFC  C K  I+ QKKCPTCR+ L M NFHR+YLPN
Sbjct: 168 MCGHIFCTNCIKQAIQFQKKCPTCRKHLKMNNFHRIYLPN 207


>dbj|BAJ86661.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326507932|dbj|BAJ86709.1| predicted protein [Hordeum
           vulgare subsp. vulgare] gi|326508880|dbj|BAJ86833.1|
           predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 260

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 29/39 (74%), Positives = 32/39 (82%)
 Frame = -2

Query: 376 ICGHIFCVTCTKSFIRIQKKCPTCRRKLNMRNFHRVYLP 260
           ICGHIFC  C K+ I+ QKKCPTCRRKL + NFHRVYLP
Sbjct: 218 ICGHIFCQKCIKASIQAQKKCPTCRRKLTISNFHRVYLP 256


>ref|XP_006660807.1| PREDICTED: E3 ubiquitin-protein ligase RNF4-like [Oryza
           brachyantha]
          Length = 195

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 27/39 (69%), Positives = 30/39 (76%)
 Frame = -2

Query: 376 ICGHIFCVTCTKSFIRIQKKCPTCRRKLNMRNFHRVYLP 260
           ICGHIFC  C K  I+IQKKCPTCR+ L   NFHR+YLP
Sbjct: 153 ICGHIFCTNCIKQAIQIQKKCPTCRKSLRANNFHRIYLP 191


>gb|EMT26068.1| E3 ubiquitin-protein ligase BRE1A [Aegilops tauschii]
          Length = 257

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 26/39 (66%), Positives = 29/39 (74%)
 Frame = -2

Query: 373 CGHIFCVTCTKSFIRIQKKCPTCRRKLNMRNFHRVYLPN 257
           CGHIFC  C K  I+ QKKCPTCR+ L   NFHR+YLPN
Sbjct: 216 CGHIFCAECIKQAIQFQKKCPTCRKALRKNNFHRIYLPN 254


>gb|EMS66011.1| E3 ubiquitin-protein ligase BRE1A [Triticum urartu]
          Length = 316

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 26/39 (66%), Positives = 29/39 (74%)
 Frame = -2

Query: 373 CGHIFCVTCTKSFIRIQKKCPTCRRKLNMRNFHRVYLPN 257
           CGHIFC  C K  I+ QKKCPTCR+ L   NFHR+YLPN
Sbjct: 211 CGHIFCAECIKQAIQFQKKCPTCRKALRRNNFHRIYLPN 249


>gb|AEE81066.1| ubiquitin-protein ligase/zinc ion binding protein [Triticum
           aestivum]
          Length = 252

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 26/39 (66%), Positives = 29/39 (74%)
 Frame = -2

Query: 373 CGHIFCVTCTKSFIRIQKKCPTCRRKLNMRNFHRVYLPN 257
           CGHIFC  C K  I+ QKKCPTCR+ L   NFHR+YLPN
Sbjct: 211 CGHIFCAECIKQAIQFQKKCPTCRKALRKNNFHRIYLPN 249


>gb|ABK23508.1| unknown [Picea sitchensis] gi|224284637|gb|ACN40051.1| unknown
           [Picea sitchensis] gi|224285742|gb|ACN40586.1| unknown
           [Picea sitchensis]
          Length = 231

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 27/39 (69%), Positives = 32/39 (82%)
 Frame = -2

Query: 376 ICGHIFCVTCTKSFIRIQKKCPTCRRKLNMRNFHRVYLP 260
           ICGHIFC +C  S I+ QKKCPTCRRKL+M N HR++LP
Sbjct: 189 ICGHIFCRSCIMSAIQFQKKCPTCRRKLSMANIHRIFLP 227


>tpg|DAA40463.1| TPA: putative RING zinc finger domain superfamily protein [Zea
           mays]
          Length = 202

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 25/39 (64%), Positives = 31/39 (79%)
 Frame = -2

Query: 373 CGHIFCVTCTKSFIRIQKKCPTCRRKLNMRNFHRVYLPN 257
           CGH+FC TC K  I++QKKCPTCR+ L M + HR+YLPN
Sbjct: 161 CGHVFCDTCIKQAIKVQKKCPTCRKGLKMNSVHRIYLPN 199


>tpg|DAA40459.1| TPA: putative RING zinc finger domain superfamily protein [Zea
           mays]
          Length = 50

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 25/39 (64%), Positives = 31/39 (79%)
 Frame = -2

Query: 373 CGHIFCVTCTKSFIRIQKKCPTCRRKLNMRNFHRVYLPN 257
           CGH+FC TC K  I++QKKCPTCR+ L M + HR+YLPN
Sbjct: 9   CGHVFCDTCIKQAIKVQKKCPTCRKGLKMNSVHRIYLPN 47


>ref|XP_003564936.1| PREDICTED: uncharacterized protein LOC100845167 [Brachypodium
           distachyon]
          Length = 254

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 27/39 (69%), Positives = 31/39 (79%)
 Frame = -2

Query: 376 ICGHIFCVTCTKSFIRIQKKCPTCRRKLNMRNFHRVYLP 260
           ICGHIFC  C K  I+ QKKCPTCR+KL + N+HRVYLP
Sbjct: 212 ICGHIFCQKCIKLSIQTQKKCPTCRKKLTVNNYHRVYLP 250


>gb|ACF86603.1| unknown [Zea mays] gi|195626322|gb|ACG34991.1| ubiquitin-protein
           ligase/ zinc ion binding protein [Zea mays]
           gi|414589889|tpg|DAA40460.1| TPA: putative RING zinc
           finger domain superfamily protein isoform 1 [Zea mays]
           gi|414589890|tpg|DAA40461.1| TPA: putative RING zinc
           finger domain superfamily protein isoform 2 [Zea mays]
           gi|414589891|tpg|DAA40462.1| TPA: putative RING zinc
           finger domain superfamily protein isoform 3 [Zea mays]
          Length = 198

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 25/39 (64%), Positives = 31/39 (79%)
 Frame = -2

Query: 373 CGHIFCVTCTKSFIRIQKKCPTCRRKLNMRNFHRVYLPN 257
           CGH+FC TC K  I++QKKCPTCR+ L M + HR+YLPN
Sbjct: 157 CGHVFCDTCIKQAIKVQKKCPTCRKGLKMNSVHRIYLPN 195


>ref|NP_001132715.1| uncharacterized protein LOC100194198 [Zea mays]
           gi|194695182|gb|ACF81675.1| unknown [Zea mays]
          Length = 198

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 25/39 (64%), Positives = 31/39 (79%)
 Frame = -2

Query: 373 CGHIFCVTCTKSFIRIQKKCPTCRRKLNMRNFHRVYLPN 257
           CGH+FC TC K  I++QKKCPTCR+ L M + HR+YLPN
Sbjct: 157 CGHVFCDTCIKQAIKVQKKCPTCRKGLKMNSVHRIYLPN 195


>tpg|DAA62195.1| TPA: putative RING zinc finger domain superfamily protein, partial
           [Zea mays]
          Length = 102

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 25/39 (64%), Positives = 31/39 (79%)
 Frame = -2

Query: 373 CGHIFCVTCTKSFIRIQKKCPTCRRKLNMRNFHRVYLPN 257
           CGHIFC TC K  I++QKKCPTCR+ L M + HR++LPN
Sbjct: 61  CGHIFCDTCIKQAIKVQKKCPTCRKGLKMNSVHRIFLPN 99