BLASTX nr result

ID: Zingiber23_contig00039687 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00039687
         (328 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523065.1| PREDICTED: U-box domain-containing protein 3...    59   5e-07
ref|XP_003527033.1| PREDICTED: U-box domain-containing protein 3...    57   3e-06
ref|XP_004138131.1| PREDICTED: U-box domain-containing protein 3...    57   3e-06
ref|XP_002283638.1| PREDICTED: U-box domain-containing protein 3...    57   3e-06
ref|XP_006338525.1| PREDICTED: U-box domain-containing protein 4...    55   7e-06
ref|XP_004965101.1| PREDICTED: U-box domain-containing protein 3...    55   7e-06
ref|XP_004232272.1| PREDICTED: U-box domain-containing protein 4...    55   7e-06
ref|XP_004501958.1| PREDICTED: U-box domain-containing protein 3...    55   1e-05
ref|XP_004301280.1| PREDICTED: U-box domain-containing protein 3...    55   1e-05
ref|NP_001057254.1| Os06g0238000 [Oryza sativa Japonica Group] g...    55   1e-05
gb|EEE65412.1| hypothetical protein OsJ_20750 [Oryza sativa Japo...    55   1e-05

>ref|XP_003523065.1| PREDICTED: U-box domain-containing protein 38-like [Glycine max]
          Length = 525

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 32/65 (49%), Positives = 35/65 (53%)
 Frame = +3

Query: 132 MRTNSKSRWKFSFRRXXXXXXXXXXXXXXXXXXXXXDVPVEFLCPISGSLMADPVIIPSG 311
           M  N K RWKFSF R                      VP EF CPISGSLM+DPV++ SG
Sbjct: 1   MGGNGKHRWKFSFHRSSSQTSNPDPN----------QVPKEFTCPISGSLMSDPVVVASG 50

Query: 312 QTFER 326
           QTFER
Sbjct: 51  QTFER 55


>ref|XP_003527033.1| PREDICTED: U-box domain-containing protein 38-like [Glycine max]
          Length = 518

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 31/65 (47%), Positives = 34/65 (52%)
 Frame = +3

Query: 132 MRTNSKSRWKFSFRRXXXXXXXXXXXXXXXXXXXXXDVPVEFLCPISGSLMADPVIIPSG 311
           M  N K RWKFSF R                       P EF CPISGSLM+DPV++ SG
Sbjct: 1   MGGNGKHRWKFSFHRSSTHP------------------PKEFTCPISGSLMSDPVVVASG 42

Query: 312 QTFER 326
           QTFER
Sbjct: 43  QTFER 47


>ref|XP_004138131.1| PREDICTED: U-box domain-containing protein 38-like [Cucumis
           sativus] gi|449477368|ref|XP_004155003.1| PREDICTED:
           U-box domain-containing protein 38-like [Cucumis
           sativus]
          Length = 536

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 30/65 (46%), Positives = 35/65 (53%)
 Frame = +3

Query: 132 MRTNSKSRWKFSFRRXXXXXXXXXXXXXXXXXXXXXDVPVEFLCPISGSLMADPVIIPSG 311
           M  N KSRWKF F                       D P EFLCP+SGSLMADPV++ +G
Sbjct: 1   MGGNGKSRWKFLFPHRRNSRLQSN------------DPPKEFLCPVSGSLMADPVVVSTG 48

Query: 312 QTFER 326
           QTF+R
Sbjct: 49  QTFDR 53


>ref|XP_002283638.1| PREDICTED: U-box domain-containing protein 38-like [Vitis vinifera]
          Length = 523

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 31/65 (47%), Positives = 34/65 (52%)
 Frame = +3

Query: 132 MRTNSKSRWKFSFRRXXXXXXXXXXXXXXXXXXXXXDVPVEFLCPISGSLMADPVIIPSG 311
           M  N K RWK SFR                        P EF+CPISGSLMADPV++ SG
Sbjct: 1   MGGNGKHRWKISFRSSSSMPKQS---------------PKEFMCPISGSLMADPVVVASG 45

Query: 312 QTFER 326
           QTFER
Sbjct: 46  QTFER 50


>ref|XP_006338525.1| PREDICTED: U-box domain-containing protein 40-like [Solanum
           tuberosum]
          Length = 486

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 28/61 (45%), Positives = 34/61 (55%)
 Frame = +3

Query: 144 SKSRWKFSFRRXXXXXXXXXXXXXXXXXXXXXDVPVEFLCPISGSLMADPVIIPSGQTFE 323
           SK RW+ SF +                      +P+EF+CPISGSLMADPVI+ SG TFE
Sbjct: 4   SKQRWRISFHKSPSKQPP---------------IPIEFVCPISGSLMADPVIVSSGHTFE 48

Query: 324 R 326
           R
Sbjct: 49  R 49


>ref|XP_004965101.1| PREDICTED: U-box domain-containing protein 39-like [Setaria
           italica]
          Length = 524

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 24/29 (82%), Positives = 26/29 (89%)
 Frame = +3

Query: 240 DVPVEFLCPISGSLMADPVIIPSGQTFER 326
           D P EFLCPISGSLMADPV++P GQTFER
Sbjct: 36  DPPEEFLCPISGSLMADPVVVPPGQTFER 64


>ref|XP_004232272.1| PREDICTED: U-box domain-containing protein 40-like [Solanum
           lycopersicum]
          Length = 481

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 28/61 (45%), Positives = 34/61 (55%)
 Frame = +3

Query: 144 SKSRWKFSFRRXXXXXXXXXXXXXXXXXXXXXDVPVEFLCPISGSLMADPVIIPSGQTFE 323
           SK RW+ SF +                      +P+EF+CPISGSLMADPVI+ SG TFE
Sbjct: 4   SKQRWRISFHKSPSKQPP---------------IPIEFVCPISGSLMADPVIVSSGHTFE 48

Query: 324 R 326
           R
Sbjct: 49  R 49


>ref|XP_004501958.1| PREDICTED: U-box domain-containing protein 38-like [Cicer
           arietinum]
          Length = 524

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 31/65 (47%), Positives = 33/65 (50%)
 Frame = +3

Query: 132 MRTNSKSRWKFSFRRXXXXXXXXXXXXXXXXXXXXXDVPVEFLCPISGSLMADPVIIPSG 311
           M  N K RWK SF R                       P EFLCPISGSLM+DPV+  SG
Sbjct: 1   MGGNGKHRWKISFHRSSTHSKQIQP-------------PKEFLCPISGSLMSDPVVTSSG 47

Query: 312 QTFER 326
           QTFER
Sbjct: 48  QTFER 52


>ref|XP_004301280.1| PREDICTED: U-box domain-containing protein 38-like [Fragaria vesca
           subsp. vesca]
          Length = 543

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 30/65 (46%), Positives = 34/65 (52%)
 Frame = +3

Query: 132 MRTNSKSRWKFSFRRXXXXXXXXXXXXXXXXXXXXXDVPVEFLCPISGSLMADPVIIPSG 311
           M  N K RW+ SF R                       P EF+CPISGSLM+DPVI+ SG
Sbjct: 1   MGGNGKHRWRISFHRSNSSAKQP---------------PKEFICPISGSLMSDPVIVASG 45

Query: 312 QTFER 326
           QTFER
Sbjct: 46  QTFER 50


>ref|NP_001057254.1| Os06g0238000 [Oryza sativa Japonica Group]
           gi|51535149|dbj|BAD37861.1| arm repeat-containing
           protein-like [Oryza sativa Japonica Group]
           gi|51535813|dbj|BAD37898.1| arm repeat-containing
           protein-like [Oryza sativa Japonica Group]
           gi|113595294|dbj|BAF19168.1| Os06g0238000 [Oryza sativa
           Japonica Group]
          Length = 518

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 23/29 (79%), Positives = 26/29 (89%)
 Frame = +3

Query: 240 DVPVEFLCPISGSLMADPVIIPSGQTFER 326
           D P EFLCPISG+LMADPV++P GQTFER
Sbjct: 30  DPPAEFLCPISGTLMADPVVVPPGQTFER 58


>gb|EEE65412.1| hypothetical protein OsJ_20750 [Oryza sativa Japonica Group]
          Length = 519

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 23/29 (79%), Positives = 26/29 (89%)
 Frame = +3

Query: 240 DVPVEFLCPISGSLMADPVIIPSGQTFER 326
           D P EFLCPISG+LMADPV++P GQTFER
Sbjct: 30  DPPAEFLCPISGTLMADPVVVPPGQTFER 58


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