BLASTX nr result
ID: Zingiber23_contig00039662
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00039662
(320 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI35066.3| unnamed protein product [Vitis vinifera] 124 1e-26
ref|XP_002266804.1| PREDICTED: putative RING-H2 finger protein A... 124 1e-26
ref|XP_002458455.1| hypothetical protein SORBIDRAFT_03g033910 [S... 116 3e-24
ref|NP_001147642.1| RING-H2 finger protein ATL2M [Zea mays] gi|1... 116 3e-24
gb|AFW57002.1| putative RING zinc finger domain superfamily prot... 115 6e-24
gb|AFW57001.1| putative RING zinc finger domain superfamily prot... 115 6e-24
ref|XP_002525544.1| ring finger protein, putative [Ricinus commu... 115 6e-24
ref|XP_006646300.1| PREDICTED: RING-H2 finger protein ATL67-like... 112 5e-23
ref|XP_003526340.1| PREDICTED: putative RING-H2 finger protein A... 112 5e-23
gb|ABA95749.1| Kelch motif family protein [Oryza sativa Japonica... 112 7e-23
emb|CBX24405.1| hypothetical_protein [Oryza glaberrima] 111 1e-22
ref|XP_004969874.1| PREDICTED: RING-H2 finger protein ATL67-like... 110 1e-22
ref|XP_003522850.1| PREDICTED: putative RING-H2 finger protein A... 110 1e-22
emb|CBX25263.1| hypothetical_protein [Oryza brachyantha] 110 2e-22
gb|EEC68825.1| hypothetical protein OsI_37395 [Oryza sativa Indi... 110 2e-22
emb|CBX25349.1| hypothetical_protein [Oryza brachyantha] 110 2e-22
ref|NP_001044176.2| Os01g0736600 [Oryza sativa Japonica Group] g... 109 4e-22
gb|EAY75741.1| hypothetical protein OsI_03653 [Oryza sativa Indi... 108 7e-22
ref|NP_001147253.1| RING-H2 finger protein ATL2M [Zea mays] gi|1... 108 9e-22
ref|XP_004961430.1| PREDICTED: RING-H2 finger protein ATL67-like... 107 1e-21
>emb|CBI35066.3| unnamed protein product [Vitis vinifera]
Length = 191
Score = 124 bits (312), Expect = 1e-26
Identities = 60/106 (56%), Positives = 69/106 (65%), Gaps = 3/106 (2%)
Frame = -2
Query: 319 AEAASAVSLDRAAIEAFYPRFAYGPGGAEP---SGPCPICLAEYEGGEALRRAPECGHCF 149
A LD AIE+ YP+ G P GPC ICL+EY E +R PEC HCF
Sbjct: 70 AAVVVVAGLDGPAIES-YPKMVLGQSRRLPRPNDGPCSICLSEYRPNETVRSIPECNHCF 128
Query: 148 HAACIDEWLRVSATCPLCRSSPVTSAAETPVGTPLSELIPLAAHRR 11
HA CIDEWLR+SATCP+CRSSP SAA TP+ TPLSE++PLA H R
Sbjct: 129 HADCIDEWLRMSATCPICRSSPAVSAAPTPLATPLSEVVPLAFHAR 174
>ref|XP_002266804.1| PREDICTED: putative RING-H2 finger protein ATL69-like [Vitis
vinifera]
Length = 174
Score = 124 bits (312), Expect = 1e-26
Identities = 60/106 (56%), Positives = 69/106 (65%), Gaps = 3/106 (2%)
Frame = -2
Query: 319 AEAASAVSLDRAAIEAFYPRFAYGPGGAEP---SGPCPICLAEYEGGEALRRAPECGHCF 149
A LD AIE+ YP+ G P GPC ICL+EY E +R PEC HCF
Sbjct: 70 AAVVVVAGLDGPAIES-YPKMVLGQSRRLPRPNDGPCSICLSEYRPNETVRSIPECNHCF 128
Query: 148 HAACIDEWLRVSATCPLCRSSPVTSAAETPVGTPLSELIPLAAHRR 11
HA CIDEWLR+SATCP+CRSSP SAA TP+ TPLSE++PLA H R
Sbjct: 129 HADCIDEWLRMSATCPICRSSPAVSAAPTPLATPLSEVVPLAFHAR 174
>ref|XP_002458455.1| hypothetical protein SORBIDRAFT_03g033910 [Sorghum bicolor]
gi|241930430|gb|EES03575.1| hypothetical protein
SORBIDRAFT_03g033910 [Sorghum bicolor]
Length = 197
Score = 116 bits (291), Expect = 3e-24
Identities = 61/108 (56%), Positives = 71/108 (65%), Gaps = 3/108 (2%)
Frame = -2
Query: 319 AEAASAVSLDRAAIEAFYPRFAYGPGGAEPSGPCPICLAEYEGGEALRRAPECGHCFHAA 140
A A S V LD AAI A YP+ A+ AE C ICL+EY GE LR PEC H FH A
Sbjct: 90 AAACSPVGLDAAAI-ASYPKVAFSSRAAEADAMCSICLSEYRDGEMLRVMPECRHGFHVA 148
Query: 139 CIDEWLRVSATCPLCRSSPVTSAAETPVGTPLSELIPL---AAHRR*R 5
C+D WLR SA+CP+CRSSP+ + TP+ TPLSEL+PL AA RR R
Sbjct: 149 CLDAWLRRSASCPVCRSSPIPTPNATPLATPLSELVPLSQYAADRRRR 196
>ref|NP_001147642.1| RING-H2 finger protein ATL2M [Zea mays] gi|195612802|gb|ACG28231.1|
RING-H2 finger protein ATL2M [Zea mays]
Length = 193
Score = 116 bits (291), Expect = 3e-24
Identities = 62/108 (57%), Positives = 71/108 (65%), Gaps = 3/108 (2%)
Frame = -2
Query: 319 AEAASAVSLDRAAIEAFYPRFAYGPGGAEPSGPCPICLAEYEGGEALRRAPECGHCFHAA 140
A A S V LD AAI A YP+ A+ AE C ICL+EY GE LR PEC H FHAA
Sbjct: 86 AAACSPVGLDAAAI-ASYPKVAFSSRAAEADAMCSICLSEYRDGETLRVMPECRHGFHAA 144
Query: 139 CIDEWLRVSATCPLCRSSPVTSAAETPVGTPLSELIPL---AAHRR*R 5
C+D WL SA+CP+CRSSPV + TP+ TPLSEL+PL AA RR R
Sbjct: 145 CLDAWLSRSASCPVCRSSPVPTPNATPLATPLSELVPLSQYAADRRRR 192
>gb|AFW57002.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 273
Score = 115 bits (288), Expect = 6e-24
Identities = 61/108 (56%), Positives = 71/108 (65%), Gaps = 3/108 (2%)
Frame = -2
Query: 319 AEAASAVSLDRAAIEAFYPRFAYGPGGAEPSGPCPICLAEYEGGEALRRAPECGHCFHAA 140
A A S V LD AAI A YP+ A+ AE + C ICL+EY GE LR PEC H FH A
Sbjct: 101 AAACSPVGLDAAAI-ASYPKVAFSSRAAEANAMCSICLSEYRDGETLRVMPECRHGFHVA 159
Query: 139 CIDEWLRVSATCPLCRSSPVTSAAETPVGTPLSELIPL---AAHRR*R 5
C+D WL SA+CP+CRSSPV + TP+ TPLSEL+PL AA RR R
Sbjct: 160 CLDAWLSRSASCPVCRSSPVPTPNATPLATPLSELVPLSQYAADRRRR 207
>gb|AFW57001.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 208
Score = 115 bits (288), Expect = 6e-24
Identities = 61/108 (56%), Positives = 71/108 (65%), Gaps = 3/108 (2%)
Frame = -2
Query: 319 AEAASAVSLDRAAIEAFYPRFAYGPGGAEPSGPCPICLAEYEGGEALRRAPECGHCFHAA 140
A A S V LD AAI A YP+ A+ AE + C ICL+EY GE LR PEC H FH A
Sbjct: 101 AAACSPVGLDAAAI-ASYPKVAFSSRAAEANAMCSICLSEYRDGETLRVMPECRHGFHVA 159
Query: 139 CIDEWLRVSATCPLCRSSPVTSAAETPVGTPLSELIPL---AAHRR*R 5
C+D WL SA+CP+CRSSPV + TP+ TPLSEL+PL AA RR R
Sbjct: 160 CLDAWLSRSASCPVCRSSPVPTPNATPLATPLSELVPLSQYAADRRRR 207
>ref|XP_002525544.1| ring finger protein, putative [Ricinus communis]
gi|223535123|gb|EEF36803.1| ring finger protein,
putative [Ricinus communis]
Length = 188
Score = 115 bits (288), Expect = 6e-24
Identities = 52/100 (52%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Frame = -2
Query: 301 VSLDRAAIEAFYPRFAYGPGGAEP---SGPCPICLAEYEGGEALRRAPECGHCFHAACID 131
V LD I++ YP+ G P +GPC ICL +Y+ + +R P+C HCFHA C+D
Sbjct: 90 VGLDEPVIKS-YPKIVLGESQRLPKPNNGPCSICLCDYQARDIIRCIPDCHHCFHAECVD 148
Query: 130 EWLRVSATCPLCRSSPVTSAAETPVGTPLSELIPLAAHRR 11
EWL +SATCPLCR+SP SAA TP+ TPLSEL+P + H R
Sbjct: 149 EWLMMSATCPLCRNSPAPSAASTPIATPLSELVPFSFHPR 188
>ref|XP_006646300.1| PREDICTED: RING-H2 finger protein ATL67-like [Oryza brachyantha]
Length = 226
Score = 112 bits (280), Expect = 5e-23
Identities = 57/106 (53%), Positives = 70/106 (66%), Gaps = 3/106 (2%)
Frame = -2
Query: 319 AEAASAVSLDRAAIEAFYPRFAYGPGGAEPSGPCPICLAEYEGGEALRRAPECGHCFHAA 140
A AAS V LD AAI A YP+ + GA+ C ICL+EY GE LR P+C H FH
Sbjct: 119 AAAASPVGLDAAAI-ASYPKVPFYSTGADADAMCSICLSEYTDGEMLRVMPDCRHRFHVV 177
Query: 139 CIDEWLRVSATCPLCRSSPVTSAAETPVGTPLSELIPL---AAHRR 11
C+D WLR +A+CP+CRSSP+ + TP+ TPLSEL+PL AA RR
Sbjct: 178 CLDAWLRRNASCPVCRSSPIPTPVATPLATPLSELVPLSQYAADRR 223
>ref|XP_003526340.1| PREDICTED: putative RING-H2 finger protein ATL69-like [Glycine max]
Length = 185
Score = 112 bits (280), Expect = 5e-23
Identities = 56/102 (54%), Positives = 68/102 (66%), Gaps = 5/102 (4%)
Frame = -2
Query: 301 VSLDRAAIEAFY-PRFAYGPGG--AEPS--GPCPICLAEYEGGEALRRAPECGHCFHAAC 137
+ +++ AIE Y P+ G + PS GPC ICL+EY E +R PEC HCFHA C
Sbjct: 84 LGMEKPAIETCYGPKIVIGESKRLSRPSDQGPCAICLSEYLPKETIRCVPECRHCFHAEC 143
Query: 136 IDEWLRVSATCPLCRSSPVTSAAETPVGTPLSELIPLAAHRR 11
IDEWL++SATCPLCR+SPV S TP TPLSEL+PLA R
Sbjct: 144 IDEWLKMSATCPLCRNSPVPSPLPTPAATPLSELVPLAFDAR 185
>gb|ABA95749.1| Kelch motif family protein [Oryza sativa Japonica Group]
Length = 676
Score = 112 bits (279), Expect = 7e-23
Identities = 58/110 (52%), Positives = 72/110 (65%), Gaps = 7/110 (6%)
Frame = -2
Query: 319 AEAASAV---SLDRAAIEAFYPRFAYGPGGAEPSG----PCPICLAEYEGGEALRRAPEC 161
A AASAV LD AI+A YP+F + G + + C ICL E+ G+ALRR P C
Sbjct: 571 APAASAVVVLGLDGPAIDALYPKFLHVGVGDDDNACAGAQCAICLGEFVAGDALRRGPGC 630
Query: 160 GHCFHAACIDEWLRVSATCPLCRSSPVTSAAETPVGTPLSELIPLAAHRR 11
GH FHA C++ WLRVSATCP+CR SP+ S P+ TPL+E +PLAAH R
Sbjct: 631 GHRFHAECVERWLRVSATCPVCRDSPLPS----PMATPLAEAVPLAAHAR 676
>emb|CBX24405.1| hypothetical_protein [Oryza glaberrima]
Length = 677
Score = 111 bits (277), Expect = 1e-22
Identities = 58/110 (52%), Positives = 72/110 (65%), Gaps = 7/110 (6%)
Frame = -2
Query: 319 AEAASAV---SLDRAAIEAFYPRFAYGPGGAEPSG----PCPICLAEYEGGEALRRAPEC 161
A AASAV LD AI+A YP+F + G + + C ICL E+ G+ALRR P C
Sbjct: 572 APAASAVVVLGLDGPAIDALYPKFLHVGVGDDDNACAGAQCAICLGEFVAGDALRRGPGC 631
Query: 160 GHCFHAACIDEWLRVSATCPLCRSSPVTSAAETPVGTPLSELIPLAAHRR 11
GH FHA C++ WLRVSATCP+CR SP+ S P+ TPL+E +PLAAH R
Sbjct: 632 GHRFHAECVERWLRVSATCPVCRDSPLPS----PMATPLAEAMPLAAHAR 677
>ref|XP_004969874.1| PREDICTED: RING-H2 finger protein ATL67-like [Setaria italica]
Length = 193
Score = 110 bits (276), Expect = 1e-22
Identities = 57/108 (52%), Positives = 68/108 (62%), Gaps = 3/108 (2%)
Frame = -2
Query: 319 AEAASAVSLDRAAIEAFYPRFAYGPGGAEPSGPCPICLAEYEGGEALRRAPECGHCFHAA 140
A + V LD AAI A YP+ + AE C ICL+EY GE LR PEC H FH A
Sbjct: 87 AASCCPVGLDPAAI-ASYPKVPFSSRAAEADAMCSICLSEYRDGEMLRLMPECRHRFHVA 145
Query: 139 CIDEWLRVSATCPLCRSSPVTSAAETPVGTPLSELIPL---AAHRR*R 5
C+D WLR S +CP+CRSSP+ + TP+ TPLSEL+PL AA RR R
Sbjct: 146 CLDAWLRRSGSCPVCRSSPIPTPTATPLATPLSELVPLSHYAADRRRR 193
>ref|XP_003522850.1| PREDICTED: putative RING-H2 finger protein ATL69-like [Glycine max]
Length = 188
Score = 110 bits (276), Expect = 1e-22
Identities = 53/102 (51%), Positives = 64/102 (62%), Gaps = 5/102 (4%)
Frame = -2
Query: 301 VSLDRAAIEAFY-PRFAYGPGGAEP----SGPCPICLAEYEGGEALRRAPECGHCFHAAC 137
+ L++ AIEA Y P+ G P GPC ICL+EY E +R PEC HCFHA C
Sbjct: 87 LGLEKPAIEACYGPKIVIGESKRLPRPNDQGPCAICLSEYLPKETIRCVPECRHCFHAEC 146
Query: 136 IDEWLRVSATCPLCRSSPVTSAAETPVGTPLSELIPLAAHRR 11
+DEWL+ SATCPLCR+SP S TPLSE++PLA H R
Sbjct: 147 VDEWLKTSATCPLCRNSPAPSPLPAAAATPLSEIVPLAFHAR 188
>emb|CBX25263.1| hypothetical_protein [Oryza brachyantha]
Length = 194
Score = 110 bits (275), Expect = 2e-22
Identities = 52/101 (51%), Positives = 65/101 (64%)
Frame = -2
Query: 313 AASAVSLDRAAIEAFYPRFAYGPGGAEPSGPCPICLAEYEGGEALRRAPECGHCFHAACI 134
A + LD AI+A YP+F + + C ICL E+ G+ALRR P CGH FHA C
Sbjct: 98 AVVVLGLDGPAIDALYPKFQHVGDTCAGAASCTICLGEFAAGDALRRGPGCGHRFHAECA 157
Query: 133 DEWLRVSATCPLCRSSPVTSAAETPVGTPLSELIPLAAHRR 11
+ WLRVSATCP+CR SP+ S P+ TPL+E +PLAAH R
Sbjct: 158 ERWLRVSATCPVCRDSPLPS----PMATPLAEAMPLAAHAR 194
>gb|EEC68825.1| hypothetical protein OsI_37395 [Oryza sativa Indica Group]
Length = 181
Score = 110 bits (275), Expect = 2e-22
Identities = 58/110 (52%), Positives = 71/110 (64%), Gaps = 7/110 (6%)
Frame = -2
Query: 319 AEAASAV---SLDRAAIEAFYPRFAYGPGGAEPSG----PCPICLAEYEGGEALRRAPEC 161
A AASAV LD AI+A YP+F + G + + C ICL E+ G+ALRR P C
Sbjct: 76 APAASAVVVLGLDGPAIDALYPKFLHVGVGDDDNACAGAQCAICLGEFVAGDALRRGPGC 135
Query: 160 GHCFHAACIDEWLRVSATCPLCRSSPVTSAAETPVGTPLSELIPLAAHRR 11
GH FHA C + WLRVSATCP+CR SP+ S P+ TPL+E +PLAAH R
Sbjct: 136 GHRFHAECAERWLRVSATCPVCRDSPLPS----PMATPLAEAVPLAAHAR 181
>emb|CBX25349.1| hypothetical_protein [Oryza brachyantha]
Length = 638
Score = 110 bits (274), Expect = 2e-22
Identities = 54/102 (52%), Positives = 67/102 (65%), Gaps = 1/102 (0%)
Frame = -2
Query: 313 AASAVSLDRAAIEAFYPRFAY-GPGGAEPSGPCPICLAEYEGGEALRRAPECGHCFHAAC 137
A + LD AI+A YP+F + G A + C ICL E+ G+ALRR P CGH FHA C
Sbjct: 541 AVVVLGLDGPAIDALYPKFQHVGDTCAAGAVACAICLGEFAAGDALRRGPGCGHRFHAEC 600
Query: 136 IDEWLRVSATCPLCRSSPVTSAAETPVGTPLSELIPLAAHRR 11
+ WLRVSATCP+CR SP+ S P+ TPL+E +PLAAH R
Sbjct: 601 AERWLRVSATCPVCRDSPLPS----PMATPLAEAVPLAAHAR 638
>ref|NP_001044176.2| Os01g0736600 [Oryza sativa Japonica Group]
gi|57900562|dbj|BAD87014.1| RING zinc finger
protein-like [Oryza sativa Japonica Group]
gi|125571944|gb|EAZ13459.1| hypothetical protein
OsJ_03375 [Oryza sativa Japonica Group]
gi|215704553|dbj|BAG94186.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215740475|dbj|BAG97131.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|255673662|dbj|BAF06090.2| Os01g0736600 [Oryza sativa
Japonica Group]
Length = 197
Score = 109 bits (272), Expect = 4e-22
Identities = 57/107 (53%), Positives = 71/107 (66%), Gaps = 4/107 (3%)
Frame = -2
Query: 319 AEAASAVSLDRAAIEAFYPRFAYGPG-GAEPSGPCPICLAEYEGGEALRRAPECGHCFHA 143
A A+S V LD AAI A YP+ + G GA+ C ICL+EY GE LR P+C H FH
Sbjct: 89 AAASSPVGLDPAAI-ASYPKVPFYSGAGADADAMCSICLSEYADGEMLRVMPDCRHRFHV 147
Query: 142 ACIDEWLRVSATCPLCRSSPVTSAAETPVGTPLSELIPL---AAHRR 11
C+D WLR +A+CP+CRSSP+ + TP+ TPLSEL+PL AA RR
Sbjct: 148 CCLDAWLRRNASCPVCRSSPIPTPVATPLATPLSELVPLSQYAADRR 194
>gb|EAY75741.1| hypothetical protein OsI_03653 [Oryza sativa Indica Group]
Length = 197
Score = 108 bits (270), Expect = 7e-22
Identities = 56/107 (52%), Positives = 72/107 (67%), Gaps = 4/107 (3%)
Frame = -2
Query: 319 AEAASAVSLDRAAIEAFYPRFAYGPG-GAEPSGPCPICLAEYEGGEALRRAPECGHCFHA 143
A A+S V LD AAI A YP+ + G G++ C ICL+EY GE LR P+C H FH
Sbjct: 89 AAASSPVGLDPAAI-ASYPKVPFYSGAGSDADAMCSICLSEYADGEMLRVMPDCRHRFHV 147
Query: 142 ACIDEWLRVSATCPLCRSSPVTSAAETPVGTPLSELIPL---AAHRR 11
+C+D WLR +A+CP+CRSSP+ + TP+ TPLSEL+PL AA RR
Sbjct: 148 SCLDAWLRRNASCPVCRSSPIPTPVATPLATPLSELVPLSQYAADRR 194
>ref|NP_001147253.1| RING-H2 finger protein ATL2M [Zea mays] gi|195609120|gb|ACG26390.1|
RING-H2 finger protein ATL2M [Zea mays]
gi|223945997|gb|ACN27082.1| unknown [Zea mays]
gi|413946146|gb|AFW78795.1| putative RING zinc finger
domain superfamily protein [Zea mays]
Length = 206
Score = 108 bits (269), Expect = 9e-22
Identities = 58/108 (53%), Positives = 70/108 (64%), Gaps = 5/108 (4%)
Frame = -2
Query: 319 AEAASAVSLDRAAIEAFYPR--FAYGPGGAEPSGPCPICLAEYEGGEALRRAPECGHCFH 146
A AAS V LD A++ A YP F+ GA+ C ICL EY+ GE LR PEC H FH
Sbjct: 95 AAAASPVGLD-ASVIASYPMVPFSKAGAGADTEVACSICLCEYKEGEMLRVMPECRHRFH 153
Query: 145 AACIDEWLRVSATCPLCRSSPVTSAAETPVGTPLSELIPL---AAHRR 11
C+D WLR SA+CP+CRSSP+ + TP+ TPLSEL+PL AA RR
Sbjct: 154 LTCLDAWLRRSASCPVCRSSPIPTPVATPLSTPLSELVPLSQYAADRR 201
>ref|XP_004961430.1| PREDICTED: RING-H2 finger protein ATL67-like isoform X2 [Setaria
italica]
Length = 204
Score = 107 bits (268), Expect = 1e-21
Identities = 58/108 (53%), Positives = 66/108 (61%), Gaps = 5/108 (4%)
Frame = -2
Query: 319 AEAASAVSLDRAAIEAFYPRFAYGPGGAEPSGP--CPICLAEYEGGEALRRAPECGHCFH 146
A AAS V LD A I A YPR + P C ICL EY GE LR PEC H FH
Sbjct: 95 AAAASPVGLDPAVI-ATYPRVPFSRAALGPDAEVACSICLCEYREGEMLRVMPECKHRFH 153
Query: 145 AACIDEWLRVSATCPLCRSSPVTSAAETPVGTPLSELIPL---AAHRR 11
C+D WLR SA+CP+CRSSP+ + TP+ TPLSEL+PL AA RR
Sbjct: 154 LTCLDAWLRRSASCPVCRSSPIPTPVSTPLSTPLSELVPLSQYAADRR 201