BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00039580
         (532 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004971067.1| PREDICTED: E3 ubiquitin-protein ligase RNF4-...    62   6e-08
ref|NP_001183915.1| uncharacterized protein LOC100502508 [Zea ma...    62   1e-07
tpg|DAA56137.1| TPA: putative RING zinc finger domain superfamil...    59   5e-07
ref|XP_002456842.1| hypothetical protein SORBIDRAFT_03g043910 [S...    57   3e-06

>ref|XP_004971067.1| PREDICTED: E3 ubiquitin-protein ligase RNF4-like [Setaria italica]
          Length = 241

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 61/190 (32%), Positives = 84/190 (44%), Gaps = 25/190 (13%)
 Frame = -1

Query: 496 IDLNFPPVESIEYPEP------------ENIYRACQQQVSYVPP----------SSATNV 383
           +DLN PP E  E   P             ++     Q  S +PP          S   +V
Sbjct: 25  LDLNCPPAEGAEGGSPFSSLPVSHNEASSSMTVQLNQASSSIPPATNEPHIGMHSCPIDV 84

Query: 382 ELTENEVVILSSSGSLPMGRNINKRNQSVMMNLNQDLELNLRRSVTA-EEHARSSSCFAC 206
           E  +++VVI SS+ SLP  R  + R  +V+  L+ D + N   +  A +EH  +      
Sbjct: 85  EAIDDDVVIYSST-SLPQARQQSTRRITVI--LDDDSDTNPEPAGDALDEHVNTLLSLGT 141

Query: 205 KRPFRSSTSGTTANYYPYHDLEDGHDARSKKLVTPEPQLVKVIVKP--HTCSICMEELVE 32
            R     ++    N +P   L D  +    K   PEP  VK + K    TC ICM EL E
Sbjct: 142 NRRHEPPSA---TNTFPVISLVDTPEVNFFK-APPEP--VKEVPKEPKFTCPICMNELTE 195

Query: 31  AASTICGHIF 2
           AAST+CGHIF
Sbjct: 196 AASTVCGHIF 205


>ref|NP_001183915.1| uncharacterized protein LOC100502508 [Zea mays]
           gi|238015412|gb|ACR38741.1| unknown [Zea mays]
          Length = 263

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 58/193 (30%), Positives = 84/193 (43%), Gaps = 26/193 (13%)
 Frame = -1

Query: 502 RNIDLNFPPVE----------SIEYPEPENIYRACQQQV---SYVPPSSAT--------- 389
           R +DLN+PP E          SI     E       Q +   S  PP++           
Sbjct: 40  RLLDLNYPPAEGAGEGASRFSSIPVSHREGSSSMPVQHIQASSSTPPATGEPRIGMRSCP 99

Query: 388 -NVELTENEVVILSSSGSLPMGRNINKRNQSVMMNLNQDLELNLRRSVTA-EEHARSSSC 215
            +VE  +++ VI SS   LP  R      +S+ + ++ D E NL  +  A +EH      
Sbjct: 100 IDVEAIDDDAVIYSSR-PLPRARQQLTTTESITIIIDDDSETNLETAGDALDEHVNLLLS 158

Query: 214 FACKRPFRSSTSGTTANYYPYHDLEDGHDARSKKLVTPEPQLVKVIVKPH--TCSICMEE 41
              +R     TS T  N +P   + D     + K +   P+ VK + K    +C ICM E
Sbjct: 159 LGIERS-HEPTSAT--NTFPGISMVDTPKVNTFKWIQVPPEPVKEVPKEPKLSCPICMNE 215

Query: 40  LVEAASTICGHIF 2
           + EAAST+CGHIF
Sbjct: 216 ITEAASTVCGHIF 228


>tpg|DAA56137.1| TPA: putative RING zinc finger domain superfamily protein [Zea
           mays]
          Length = 260

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 61/193 (31%), Positives = 85/193 (44%), Gaps = 26/193 (13%)
 Frame = -1

Query: 502 RNIDLNFPPVE----------SIEYPEPENIYRACQQQV---SYVPPSSAT--------- 389
           R +DLN+PP E          SI     E       Q +   S  PP++           
Sbjct: 40  RLLDLNYPPAEGAGEGASRFSSIPVSHREGSSSMPVQHIQASSSTPPATGEPRIGMRSCP 99

Query: 388 -NVELTENEVVILSSSGSLPMGRNINKRNQSVMMNLNQDLELNLRRSVTA-EEHARSSSC 215
            +VE  +++ VI SS   LP  R      +S+ + ++ D E NL  +  A +EH      
Sbjct: 100 IDVEAIDDDAVIYSSR-PLPRARQQLTTTESITIIIDDDSETNLETAGDALDEHVNLLLS 158

Query: 214 FACKRPFRSSTSGTTANYYPYHDLEDGHDARSKKLVTPEPQLVKVIVKPH--TCSICMEE 41
              +R     TS T  N +P   + D     + K V PEP  VK + K    +C ICM E
Sbjct: 159 LGIERS-HEPTSAT--NTFPGISMVDTPKVNTFK-VPPEP--VKEVPKEPKLSCPICMNE 212

Query: 40  LVEAASTICGHIF 2
           + EAAST+CGHIF
Sbjct: 213 ITEAASTVCGHIF 225


>ref|XP_002456842.1| hypothetical protein SORBIDRAFT_03g043910 [Sorghum bicolor]
           gi|241928817|gb|EES01962.1| hypothetical protein
           SORBIDRAFT_03g043910 [Sorghum bicolor]
          Length = 242

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 61/191 (31%), Positives = 83/191 (43%), Gaps = 26/191 (13%)
 Frame = -1

Query: 496 IDLNFPPVESI-EYPEPEN------IYRACQQQVSYVPPSSAT----------------N 386
           +DLN PP E   E   P N      I  +    V ++  SS+T                +
Sbjct: 25  LDLNCPPAEGAGEGALPFNSMPVLHIQASSSMPVQHIQASSSTPPATDEPRIGMLSCPID 84

Query: 385 VELTENEVVILSSSGSLPMGRNINKRNQSVMMNLNQDLELNLRRSVTA-EEHARSSSCFA 209
           VE  +++VVI SSS SLP  R  + R   V+  ++ D E N   +  A  EH  +     
Sbjct: 85  VEAIDDDVVIYSSS-SLPQARQQSTRTAVVI--IDDDSETNPEPAGDALHEHVNTLLSLG 141

Query: 208 CKRPFRSSTSGTTANYYPYHDLEDGHDARSKKLVTPEPQLVKVIVKP--HTCSICMEELV 35
             R      +    N  P   + D  +  + K   PEP  VK + K    +C ICM EL 
Sbjct: 142 INRRHEPPRA---TNARPVISIVDTPEVNTFK-APPEP--VKEVPKEPKFSCPICMNELT 195

Query: 34  EAASTICGHIF 2
           EAAST+CGHIF
Sbjct: 196 EAASTVCGHIF 206