BLASTX nr result
ID: Zingiber23_contig00039563
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00039563
(784 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006845712.1| hypothetical protein AMTR_s00019p00242060 [A... 72 3e-10
dbj|BAJ97088.1| predicted protein [Hordeum vulgare subsp. vulgare] 68 4e-09
emb|CBI17870.3| unnamed protein product [Vitis vinifera] 67 5e-09
ref|XP_002267344.1| PREDICTED: RING-H2 finger protein ATL43-like... 67 5e-09
ref|XP_004966142.1| PREDICTED: RING-H2 finger protein ATL43-like... 62 2e-07
gb|AFW69273.1| putative RING zinc finger domain superfamily prot... 61 4e-07
gb|EAZ02219.1| hypothetical protein OsI_24313 [Oryza sativa Indi... 61 4e-07
ref|XP_004162811.1| PREDICTED: RING-H2 finger protein ATL43-like... 60 1e-06
ref|XP_004150747.1| PREDICTED: RING-H2 finger protein ATL43-like... 60 1e-06
sp|Q5EAE9.2|ATL43_ARATH RecName: Full=RING-H2 finger protein ATL... 59 2e-06
ref|XP_006657288.1| PREDICTED: RING-H2 finger protein ATL43-like... 59 2e-06
ref|NP_196200.2| RING-H2 finger protein ATL43 [Arabidopsis thali... 59 2e-06
dbj|BAD53905.1| RING zinc finger protein-like [Oryza sativa Japo... 59 2e-06
ref|NP_001058454.2| Os06g0695900 [Oryza sativa Japonica Group] g... 59 2e-06
gb|ABK24933.1| unknown [Picea sitchensis] 59 2e-06
ref|XP_006287867.1| hypothetical protein CARUB_v10001094mg [Caps... 58 3e-06
ref|XP_006474307.1| PREDICTED: RING-H2 finger protein ATL43-like... 57 7e-06
ref|XP_006453207.1| hypothetical protein CICLE_v10010271mg, part... 57 7e-06
>ref|XP_006845712.1| hypothetical protein AMTR_s00019p00242060 [Amborella trichopoda]
gi|548848284|gb|ERN07387.1| hypothetical protein
AMTR_s00019p00242060 [Amborella trichopoda]
Length = 502
Score = 71.6 bits (174), Expect = 3e-10
Identities = 50/122 (40%), Positives = 63/122 (51%), Gaps = 8/122 (6%)
Frame = -2
Query: 744 RKDSLLPTETVEDREAFERRHSHRIVVSDLDRYLDRWSDLRPTDLLFLRREMIITDSGRF 565
RKD LL +E+R +FERR HRI+VSD + RWSDLRP+DLLFLR EMI+ +SGRF
Sbjct: 272 RKDGLL----MEERRSFERRVGHRIIVSDAG-FRQRWSDLRPSDLLFLRSEMILGESGRF 326
Query: 564 XXXXXXXXXXXXAHPATTSSRCASEISRVRRMS--------SGREGSLAGRGTARTEADE 409
+ SSR E V R+S G +G+ R + E
Sbjct: 327 ----------------SLSSRKQDERENVERLSLSNHNVHRRGEQGNSEEREEGTEKLSE 370
Query: 408 ER 403
ER
Sbjct: 371 ER 372
>dbj|BAJ97088.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 451
Score = 67.8 bits (164), Expect = 4e-09
Identities = 47/122 (38%), Positives = 61/122 (50%), Gaps = 13/122 (10%)
Frame = -2
Query: 750 KVRKDSLLPTETVE-----DREAFERRHSHRIVVSDLDRYLD--------RWSDLRPTDL 610
KVRKD +L E D AF+RR HRI+VS D RWSDLRP DL
Sbjct: 312 KVRKDRVLMVEPAAAVAEPDPVAFDRRFGHRILVSTACGCDDETAPAAKQRWSDLRPADL 371
Query: 609 LFLRREMIITDSGRFXXXXXXXXXXXXAHPATTSSRCASEISRVRRMSSGREGSLAGRGT 430
+F+R EM++T++GR+ S RC SEI+ V R+ R G+ G+
Sbjct: 372 MFVRSEMLVTETGRYSCSAAVNSGNRGR--TEISGRCLSEIAGVSRLPPIRAGAEPRAGS 429
Query: 429 AR 424
AR
Sbjct: 430 AR 431
>emb|CBI17870.3| unnamed protein product [Vitis vinifera]
Length = 457
Score = 67.4 bits (163), Expect = 5e-09
Identities = 41/96 (42%), Positives = 56/96 (58%), Gaps = 2/96 (2%)
Frame = -2
Query: 744 RKDSLLPTETVEDREAFERRHSHRIVVSDLDR--YLDRWSDLRPTDLLFLRREMIITDSG 571
RKD LL T EDR +FERR HRI+VS + RWSD++P+DLL+LR EMII+D+
Sbjct: 270 RKDELLLTS--EDRNSFERRLDHRIIVSAAGSGGFHQRWSDVQPSDLLYLRSEMIISDNR 327
Query: 570 RFXXXXXXXXXXXXAHPATTSSRCASEISRVRRMSS 463
R + + +SR SEI+ + R+ S
Sbjct: 328 RLSSCHGTIEGGSWSGRSVINSRSVSEITGLSRLGS 363
>ref|XP_002267344.1| PREDICTED: RING-H2 finger protein ATL43-like [Vitis vinifera]
Length = 404
Score = 67.4 bits (163), Expect = 5e-09
Identities = 41/96 (42%), Positives = 56/96 (58%), Gaps = 2/96 (2%)
Frame = -2
Query: 744 RKDSLLPTETVEDREAFERRHSHRIVVSDLDR--YLDRWSDLRPTDLLFLRREMIITDSG 571
RKD LL T EDR +FERR HRI+VS + RWSD++P+DLL+LR EMII+D+
Sbjct: 270 RKDELLLTS--EDRNSFERRLDHRIIVSAAGSGGFHQRWSDVQPSDLLYLRSEMIISDNR 327
Query: 570 RFXXXXXXXXXXXXAHPATTSSRCASEISRVRRMSS 463
R + + +SR SEI+ + R+ S
Sbjct: 328 RLSSCHGTIEGGSWSGRSVINSRSVSEITGLSRLGS 363
>ref|XP_004966142.1| PREDICTED: RING-H2 finger protein ATL43-like [Setaria italica]
Length = 400
Score = 62.0 bits (149), Expect = 2e-07
Identities = 49/138 (35%), Positives = 64/138 (46%), Gaps = 15/138 (10%)
Frame = -2
Query: 750 KVRKDSLLPTETVE-----DREAFERRHSHRIVVSDLD--------RYLDRWSDLRPTDL 610
KVRKD +L E D EAF+RR HRI+VS RWSDLRP+DL
Sbjct: 252 KVRKDRVLLVEPAAVVAEPDPEAFDRRFGHRILVSTAGGCEGETAPAAQQRWSDLRPSDL 311
Query: 609 LFLRREMIITDSGRFXXXXXXXXXXXXAHPATTSSRCASEISRVRRMSSGREGSLAGRGT 430
+F+R E ++TD+GR+ + R SE++ V R+ R G+ G
Sbjct: 312 MFVRSEFLVTDAGRYSCSAAVNSGSAR---SAIGVRSLSELAGVCRLPPIRAGACEG--- 365
Query: 429 ARTEADEER--TLRRWLG 382
DE R RRW G
Sbjct: 366 ----DDEPRGGGARRWPG 379
>gb|AFW69273.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 397
Score = 61.2 bits (147), Expect = 4e-07
Identities = 51/155 (32%), Positives = 66/155 (42%), Gaps = 13/155 (8%)
Frame = -2
Query: 750 KVRKDSLLPTETVE-----DREAFERRHSHRIVVSDLD--------RYLDRWSDLRPTDL 610
KVRKD +L E D AF+RR HRI+VS RWSDLRP+DL
Sbjct: 257 KVRKDRVLLVEPAAVVAEPDPVAFDRRFGHRILVSTAGGCKGETAPAAQQRWSDLRPSDL 316
Query: 609 LFLRREMIITDSGRFXXXXXXXXXXXXAHPATTSSRCASEISRVRRMSSGREGSLAGRGT 430
+F+R E ++TD+GR + R SE++ VRR+ R G+ G
Sbjct: 317 MFVRAEFLVTDAGRHSCSAAVNSGNAR---SAIGVRSVSELAGVRRLPPIRAGACEGEPR 373
Query: 429 ARTEADEERTLRRWLGFAGVRVAKASRWTERRQSG 325
A RRW G +S W R G
Sbjct: 374 AGGGG-----ARRWPG--------SSWWAPRGDPG 395
>gb|EAZ02219.1| hypothetical protein OsI_24313 [Oryza sativa Indica Group]
Length = 399
Score = 61.2 bits (147), Expect = 4e-07
Identities = 42/122 (34%), Positives = 61/122 (50%), Gaps = 13/122 (10%)
Frame = -2
Query: 750 KVRKDSLLPTETVE-----DREAFERRHSHRIVVSDLDRYLD--------RWSDLRPTDL 610
KVRKD +L E D EA++RR HRI+VS D RWS++RP+DL
Sbjct: 262 KVRKDRVLLMEPAAAVAEPDPEAYDRRFGHRILVSTAGGCEDETAPAAKQRWSEVRPSDL 321
Query: 609 LFLRREMIITDSGRFXXXXXXXXXXXXAHPATTSSRCASEISRVRRMSSGREGSLAGRGT 430
+F+R EM++T++GR+ + S+R SE++ V R+ R G G
Sbjct: 322 MFVRSEMLVTEAGRYSCSAAVHSGNGR---SVISARSLSELAGVSRLPPIRAGGEPRAGA 378
Query: 429 AR 424
R
Sbjct: 379 RR 380
>ref|XP_004162811.1| PREDICTED: RING-H2 finger protein ATL43-like [Cucumis sativus]
Length = 391
Score = 59.7 bits (143), Expect = 1e-06
Identities = 40/105 (38%), Positives = 55/105 (52%)
Frame = -2
Query: 744 RKDSLLPTETVEDREAFERRHSHRIVVSDLDRYLDRWSDLRPTDLLFLRREMIITDSGRF 565
RKD LL E ++ + R HRI+VS ++RWSD++ +DLL+LR EMII+DS RF
Sbjct: 305 RKDGLLLPEEKTNQNQNQNRLEHRIIVSPKVPVVERWSDVQGSDLLYLRSEMIISDSRRF 364
Query: 564 XXXXXXXXXXXXAHPATTSSRCASEISRVRRMSSGREGSLAGRGT 430
+ + E+ R RRM G G AG+GT
Sbjct: 365 -----------------SVASLPVELKRQRRM--GMMGKHAGKGT 390
>ref|XP_004150747.1| PREDICTED: RING-H2 finger protein ATL43-like [Cucumis sativus]
Length = 313
Score = 59.7 bits (143), Expect = 1e-06
Identities = 40/105 (38%), Positives = 55/105 (52%)
Frame = -2
Query: 744 RKDSLLPTETVEDREAFERRHSHRIVVSDLDRYLDRWSDLRPTDLLFLRREMIITDSGRF 565
RKD LL E ++ + R HRI+VS ++RWSD++ +DLL+LR EMII+DS RF
Sbjct: 227 RKDGLLLPEEKTNQNQNQNRLEHRIIVSPKVPVVERWSDVQGSDLLYLRSEMIISDSRRF 286
Query: 564 XXXXXXXXXXXXAHPATTSSRCASEISRVRRMSSGREGSLAGRGT 430
+ + E+ R RRM G G AG+GT
Sbjct: 287 -----------------SVASLPVELKRQRRM--GMMGKHAGKGT 312
>sp|Q5EAE9.2|ATL43_ARATH RecName: Full=RING-H2 finger protein ATL43; Flags: Precursor
gi|9759106|dbj|BAB09675.1| unnamed protein product
[Arabidopsis thaliana]
Length = 407
Score = 58.9 bits (141), Expect = 2e-06
Identities = 29/56 (51%), Positives = 41/56 (73%)
Frame = -2
Query: 744 RKDSLLPTETVEDREAFERRHSHRIVVSDLDRYLDRWSDLRPTDLLFLRREMIITD 577
RKD LL + +RE+FE R HRI++S +R RWS++RP+DLL+LR EMI++D
Sbjct: 295 RKDGLL---LIPNRESFEGRFEHRIIISGGNRDDQRWSEVRPSDLLYLRSEMILSD 347
>ref|XP_006657288.1| PREDICTED: RING-H2 finger protein ATL43-like [Oryza brachyantha]
Length = 344
Score = 58.9 bits (141), Expect = 2e-06
Identities = 33/75 (44%), Positives = 46/75 (61%), Gaps = 13/75 (17%)
Frame = -2
Query: 750 KVRKDSLLPTETVE-----DREAFERRHSHRIVVSDLDRYLD--------RWSDLRPTDL 610
KVRKD +L E D EAF+RR HRI+VS D RWS++RP+DL
Sbjct: 252 KVRKDRVLLMEPAAAGAQPDPEAFDRRFGHRILVSTAGGCEDETAPAAKQRWSEVRPSDL 311
Query: 609 LFLRREMIITDSGRF 565
+F+R EM++T++GR+
Sbjct: 312 MFVRSEMLVTEAGRY 326
>ref|NP_196200.2| RING-H2 finger protein ATL43 [Arabidopsis thaliana]
gi|58743300|gb|AAW81728.1| At5g05810 [Arabidopsis
thaliana] gi|61656157|gb|AAX49381.1| At5g05810
[Arabidopsis thaliana] gi|332003545|gb|AED90928.1|
RING-H2 finger protein ATL43 [Arabidopsis thaliana]
Length = 353
Score = 58.9 bits (141), Expect = 2e-06
Identities = 29/56 (51%), Positives = 41/56 (73%)
Frame = -2
Query: 744 RKDSLLPTETVEDREAFERRHSHRIVVSDLDRYLDRWSDLRPTDLLFLRREMIITD 577
RKD LL + +RE+FE R HRI++S +R RWS++RP+DLL+LR EMI++D
Sbjct: 241 RKDGLL---LIPNRESFEGRFEHRIIISGGNRDDQRWSEVRPSDLLYLRSEMILSD 293
>dbj|BAD53905.1| RING zinc finger protein-like [Oryza sativa Japonica Group]
gi|53793216|dbj|BAD54441.1| RING zinc finger
protein-like [Oryza sativa Japonica Group]
Length = 425
Score = 58.9 bits (141), Expect = 2e-06
Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Frame = -2
Query: 750 KVRKDSLLPTETVE-----DREAFERRHSHRIVVSDLDRYLD--------RWSDLRPTDL 610
KVRKD +L E D EA++RR HRI+VS D RWS++RP+DL
Sbjct: 288 KVRKDRVLLMEPAAAVAEPDPEAYDRRFGHRILVSTAGGCEDETAPAAKQRWSEVRPSDL 347
Query: 609 LFLRREMIITDSGRFXXXXXXXXXXXXAHPATTSSRCASEISRVRRMSSGREGSLAGRGT 430
+F+R EM++T++GR+ + S+R SE++ V R+ R G
Sbjct: 348 MFVRSEMLVTEAGRYSCSAAVHSGNGR---SVISARSLSELAGVSRLPPIRASGEPRAGA 404
Query: 429 AR 424
R
Sbjct: 405 RR 406
>ref|NP_001058454.2| Os06g0695900 [Oryza sativa Japonica Group]
gi|222636150|gb|EEE66282.1| hypothetical protein
OsJ_22489 [Oryza sativa Japonica Group]
gi|255677351|dbj|BAF20368.2| Os06g0695900 [Oryza sativa
Japonica Group]
Length = 398
Score = 58.9 bits (141), Expect = 2e-06
Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Frame = -2
Query: 750 KVRKDSLLPTETVE-----DREAFERRHSHRIVVSDLDRYLD--------RWSDLRPTDL 610
KVRKD +L E D EA++RR HRI+VS D RWS++RP+DL
Sbjct: 261 KVRKDRVLLMEPAAAVAEPDPEAYDRRFGHRILVSTAGGCEDETAPAAKQRWSEVRPSDL 320
Query: 609 LFLRREMIITDSGRFXXXXXXXXXXXXAHPATTSSRCASEISRVRRMSSGREGSLAGRGT 430
+F+R EM++T++GR+ + S+R SE++ V R+ R G
Sbjct: 321 MFVRSEMLVTEAGRYSCSAAVHSGNGR---SVISARSLSELAGVSRLPPIRASGEPRAGA 377
Query: 429 AR 424
R
Sbjct: 378 RR 379
>gb|ABK24933.1| unknown [Picea sitchensis]
Length = 412
Score = 58.9 bits (141), Expect = 2e-06
Identities = 33/61 (54%), Positives = 43/61 (70%), Gaps = 2/61 (3%)
Frame = -2
Query: 744 RKDSLLPTETVEDREA--FERRHSHRIVVSDLDRYLDRWSDLRPTDLLFLRREMIITDSG 571
RK+ LL +E ED + F+RR +HRIVVSD+ RWSD +P+DLLFL +MI T+SG
Sbjct: 256 RKEGLLLSEADEDSKQLQFDRRFAHRIVVSDVMSQ-HRWSDRKPSDLLFLSSQMITTESG 314
Query: 570 R 568
R
Sbjct: 315 R 315
>ref|XP_006287867.1| hypothetical protein CARUB_v10001094mg [Capsella rubella]
gi|482556573|gb|EOA20765.1| hypothetical protein
CARUB_v10001094mg [Capsella rubella]
Length = 407
Score = 58.2 bits (139), Expect = 3e-06
Identities = 29/57 (50%), Positives = 41/57 (71%)
Frame = -2
Query: 744 RKDSLLPTETVEDREAFERRHSHRIVVSDLDRYLDRWSDLRPTDLLFLRREMIITDS 574
RKD LL + +RE+ E R HRI++S +R RWS++RP+DLL+LR EMI++DS
Sbjct: 293 RKDGLL---LIPNRESLEGRFEHRIIISGGNRDDQRWSEVRPSDLLYLRSEMILSDS 346
>ref|XP_006474307.1| PREDICTED: RING-H2 finger protein ATL43-like [Citrus sinensis]
Length = 445
Score = 57.0 bits (136), Expect = 7e-06
Identities = 31/65 (47%), Positives = 45/65 (69%), Gaps = 5/65 (7%)
Frame = -2
Query: 744 RKDSLLPTETVE-DREAFERRHSHRIVVSDL----DRYLDRWSDLRPTDLLFLRREMIIT 580
RKD LL T+ + DR++ ERR HRI++S + RWSD++P+DLL+LR EM+++
Sbjct: 270 RKDGLLLTDGLTADRKSSERRFEHRIIISAGAGAGGGFSRRWSDVQPSDLLYLRSEMLLS 329
Query: 579 DSGRF 565
DS RF
Sbjct: 330 DSRRF 334
>ref|XP_006453207.1| hypothetical protein CICLE_v10010271mg, partial [Citrus clementina]
gi|557556433|gb|ESR66447.1| hypothetical protein
CICLE_v10010271mg, partial [Citrus clementina]
Length = 499
Score = 57.0 bits (136), Expect = 7e-06
Identities = 31/65 (47%), Positives = 45/65 (69%), Gaps = 5/65 (7%)
Frame = -2
Query: 744 RKDSLLPTETVE-DREAFERRHSHRIVVSDL----DRYLDRWSDLRPTDLLFLRREMIIT 580
RKD LL T+ + DR++ ERR HRI++S + RWSD++P+DLL+LR EM+++
Sbjct: 349 RKDGLLLTDGLTADRKSSERRFEHRIIISAGAGAGGGFSRRWSDVQPSDLLYLRSEMLLS 408
Query: 579 DSGRF 565
DS RF
Sbjct: 409 DSRRF 413