BLASTX nr result

ID: Zingiber23_contig00039544 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00039544
         (409 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY26714.1| MAR binding filament-like protein 1, putative iso...    59   9e-07
ref|XP_002299637.2| hypothetical protein POPTR_0001s17980g [Popu...    55   1e-05

>gb|EOY26714.1| MAR binding filament-like protein 1, putative isoform 1 [Theobroma
           cacao]
          Length = 766

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 42/136 (30%), Positives = 73/136 (53%), Gaps = 1/136 (0%)
 Frame = +1

Query: 4   CANEESPVGSAGASRRRTLLLVGISVFPFLKLRAIAADG-LLVEDKQDLMLPDNQDILML 180
           C   E P     +S+RR +LLVG+S+ PFL+LRA A +G  L  ++Q     D +    +
Sbjct: 50  CLAHEDPNDDV-SSKRRAVLLVGMSILPFLQLRAQALEGSTLSRERQRKRKKDGEVEETM 108

Query: 181 DKQEVIMPDNQDAIVGDKQDDKLLDIQSVKDTMLEVSSEGPNQLEQAALQNAPASSFVSF 360
           +    +  +  +  V   + +++ + Q  K    +++    N+ E+A  ++ P++ F+S 
Sbjct: 109 ELPMAVASEGSE--VKKPERNQIAESQLNKLEANQIAESQLNKPEEAR-EDIPSNPFLSL 165

Query: 361 LNEFGIVASGVLGALY 408
           LN  GI  +GVLGALY
Sbjct: 166 LNGLGIFGAGVLGALY 181


>ref|XP_002299637.2| hypothetical protein POPTR_0001s17980g [Populus trichocarpa]
           gi|550347577|gb|EEE84442.2| hypothetical protein
           POPTR_0001s17980g [Populus trichocarpa]
          Length = 784

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 42/136 (30%), Positives = 67/136 (49%), Gaps = 1/136 (0%)
 Frame = +1

Query: 4   CANEESPVGSAGASRRRTLLLVGISVFPFLKLRAIAADGLLVEDKQDLMLPDNQDILMLD 183
           C  +E P+      ++R +L +GISV PFL+LRA A +GL+ + +             L 
Sbjct: 53  CMGQEDPMDIV-FRKKRAILFLGISVLPFLQLRARALEGLVTKRRN------------LG 99

Query: 184 KQEVIMPDNQDAIVGDKQDDKLLDIQSVKDTMLEVSSEGPNQLEQAALQN-APASSFVSF 360
            +E     N     G +  + + +   +++  L    E  +Q E+ A+Q   P + F+S 
Sbjct: 100 GEE---RRNWRETRGTENGETVKETNEIEEATLMAPEE--DQKEELAIQRYTPPNPFLSL 154

Query: 361 LNEFGIVASGVLGALY 408
           LN  GI  +GVLGALY
Sbjct: 155 LNGLGIFGTGVLGALY 170


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