BLASTX nr result

ID: Zingiber23_contig00038642 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00038642
         (385 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526489.1| eukaryotic translation initiation factor 4g,...    57   3e-06
ref|XP_006375192.1| hypothetical protein POPTR_0014s05150g [Popu...    55   1e-05

>ref|XP_002526489.1| eukaryotic translation initiation factor 4g, putative [Ricinus
           communis] gi|223534164|gb|EEF35880.1| eukaryotic
           translation initiation factor 4g, putative [Ricinus
           communis]
          Length = 1753

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 34/90 (37%), Positives = 56/90 (62%), Gaps = 5/90 (5%)
 Frame = -2

Query: 381 SGQMPTNSQAPRYNYPLNQIGLNLNFLDSSAINHIPSGKSLSTPLHGISEGLKLEALS-- 208
           SGQ+P+NSQ PRYNY ++Q   N++F++ SA+N +P  KS  T +HG+++   LE     
Sbjct: 437 SGQIPSNSQQPRYNYSVSQGPQNVSFVNPSAVNSLPINKS-GTSMHGMADPSNLEHARDV 495

Query: 207 ---VSASLPCSGQVTLRPPVGSKTVKTGAS 127
              +S++   + QV ++P   + TV+ G S
Sbjct: 496 HNVISSASSGTVQVKVKP---AATVEKGVS 522


>ref|XP_006375192.1| hypothetical protein POPTR_0014s05150g [Populus trichocarpa]
           gi|550323511|gb|ERP52989.1| hypothetical protein
           POPTR_0014s05150g [Populus trichocarpa]
          Length = 1922

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 38/104 (36%), Positives = 59/104 (56%), Gaps = 6/104 (5%)
 Frame = -2

Query: 378 GQMPTNSQAP-RYNYPLNQIGLNLNFLDSSAINHIPSGKSLSTPLHGISEGLKLEALS-- 208
           GQ+  NSQ P R+NYP++Q   N+ + ++SA+N +P+ KS    +HG++E  K E  S  
Sbjct: 490 GQIAPNSQPPPRFNYPVSQGPQNVPYTNASALNSLPASKS-GIAIHGVAELHKSEHASDA 548

Query: 207 ---VSASLPCSGQVTLRPPVGSKTVKTGASLSSPSVVITMPSTK 85
              +S++     QVT++PPVGS     G  +  PS+    P  K
Sbjct: 549 PNAISSTPSGVVQVTIKPPVGS----IGEKVVEPSLPKISPVEK 588


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