BLASTX nr result

ID: Zingiber23_contig00038463 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00038463
         (237 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY04211.1| Rad23 UV excision repair protein family isoform 2...   117   1e-24
gb|EOY04210.1| Rad23 UV excision repair protein family isoform 1...   117   1e-24
gb|EMJ28918.1| hypothetical protein PRUPE_ppa007047mg [Prunus pe...   115   5e-24
ref|XP_004233496.1| PREDICTED: putative DNA repair protein RAD23...   114   1e-23
ref|XP_004233495.1| PREDICTED: putative DNA repair protein RAD23...   114   1e-23
gb|EMJ16714.1| hypothetical protein PRUPE_ppa007020mg [Prunus pe...   114   1e-23
ref|XP_006655985.1| PREDICTED: ubiquitin receptor RAD23c-like [O...   113   3e-23
gb|EMJ24290.1| hypothetical protein PRUPE_ppa007032mg [Prunus pe...   113   3e-23
gb|EMJ24289.1| hypothetical protein PRUPE_ppa007032mg [Prunus pe...   113   3e-23
ref|XP_002516727.1| uv excision repair protein rad23, putative [...   113   3e-23
gb|EXB97156.1| Putative DNA repair protein RAD23-4 [Morus notabi...   112   4e-23
gb|EXB97154.1| Putative DNA repair protein RAD23-3 [Morus notabi...   112   7e-23
ref|XP_002529115.1| uv excision repair protein rad23, putative [...   112   7e-23
ref|XP_004232367.1| PREDICTED: putative DNA repair protein RAD23...   112   7e-23
gb|ABD96960.1| hypothetical protein [Cleome spinosa]                  111   9e-23
ref|XP_006363121.1| PREDICTED: ubiquitin receptor RAD23c-like [S...   111   1e-22
gb|ABB02636.1| RAD23-like [Solanum tuberosum]                         110   1e-22
ref|XP_006367045.1| PREDICTED: ubiquitin receptor RAD23c-like [S...   110   2e-22
ref|XP_004236965.1| PREDICTED: putative DNA repair protein RAD23...   110   2e-22
ref|NP_001057334.1| Os06g0264300 [Oryza sativa Japonica Group] g...   110   2e-22

>gb|EOY04211.1| Rad23 UV excision repair protein family isoform 2 [Theobroma cacao]
          Length = 350

 Score =  117 bits (294), Expect = 1e-24
 Identities = 55/73 (75%), Positives = 68/73 (93%)
 Frame = -2

Query: 221 MRLSVKTLKGTNFEIDVKPEDTVAEVKKFIETSQGKDVYPAEQQMLIHQGKILKDNTTLA 42
           M++ VKTLKGT+FEI+VKPEDTVA+VKK I+T+QG D+YPA QQMLIHQGK+LKDNTTL 
Sbjct: 1   MKIFVKTLKGTHFEIEVKPEDTVADVKKNIDTAQGPDIYPAAQQMLIHQGKVLKDNTTLD 60

Query: 41  DNEVSDNSFLVIM 3
           DN+V++NSF+VIM
Sbjct: 61  DNKVAENSFIVIM 73


>gb|EOY04210.1| Rad23 UV excision repair protein family isoform 1 [Theobroma cacao]
          Length = 487

 Score =  117 bits (294), Expect = 1e-24
 Identities = 55/73 (75%), Positives = 68/73 (93%)
 Frame = -2

Query: 221 MRLSVKTLKGTNFEIDVKPEDTVAEVKKFIETSQGKDVYPAEQQMLIHQGKILKDNTTLA 42
           M++ VKTLKGT+FEI+VKPEDTVA+VKK I+T+QG D+YPA QQMLIHQGK+LKDNTTL 
Sbjct: 1   MKIFVKTLKGTHFEIEVKPEDTVADVKKNIDTAQGPDIYPAAQQMLIHQGKVLKDNTTLD 60

Query: 41  DNEVSDNSFLVIM 3
           DN+V++NSF+VIM
Sbjct: 61  DNKVAENSFIVIM 73


>gb|EMJ28918.1| hypothetical protein PRUPE_ppa007047mg [Prunus persica]
          Length = 385

 Score =  115 bits (289), Expect = 5e-24
 Identities = 54/73 (73%), Positives = 68/73 (93%)
 Frame = -2

Query: 221 MRLSVKTLKGTNFEIDVKPEDTVAEVKKFIETSQGKDVYPAEQQMLIHQGKILKDNTTLA 42
           M++ VKTLKGT+F+++VKPEDTVA+VKK IETSQG DVYPA QQMLIHQGK+LKD+TTL 
Sbjct: 1   MKIFVKTLKGTHFDVEVKPEDTVADVKKQIETSQGSDVYPASQQMLIHQGKVLKDSTTLD 60

Query: 41  DNEVSDNSFLVIM 3
           +N+V++NSF+VIM
Sbjct: 61  ENKVAENSFVVIM 73


>ref|XP_004233496.1| PREDICTED: putative DNA repair protein RAD23-3-like isoform 2
           [Solanum lycopersicum]
          Length = 365

 Score =  114 bits (286), Expect = 1e-23
 Identities = 55/73 (75%), Positives = 67/73 (91%)
 Frame = -2

Query: 221 MRLSVKTLKGTNFEIDVKPEDTVAEVKKFIETSQGKDVYPAEQQMLIHQGKILKDNTTLA 42
           M++ VKTLKGT+FEI+VKPEDTVA+VKK IET QG+DVYPA QQMLIHQGK+LKD TTL 
Sbjct: 1   MKIFVKTLKGTHFEIEVKPEDTVADVKKSIETVQGQDVYPAAQQMLIHQGKVLKDPTTLE 60

Query: 41  DNEVSDNSFLVIM 3
           +N+V++NSF+VIM
Sbjct: 61  ENKVAENSFVVIM 73


>ref|XP_004233495.1| PREDICTED: putative DNA repair protein RAD23-3-like isoform 1
           [Solanum lycopersicum]
          Length = 383

 Score =  114 bits (286), Expect = 1e-23
 Identities = 55/73 (75%), Positives = 67/73 (91%)
 Frame = -2

Query: 221 MRLSVKTLKGTNFEIDVKPEDTVAEVKKFIETSQGKDVYPAEQQMLIHQGKILKDNTTLA 42
           M++ VKTLKGT+FEI+VKPEDTVA+VKK IET QG+DVYPA QQMLIHQGK+LKD TTL 
Sbjct: 1   MKIFVKTLKGTHFEIEVKPEDTVADVKKSIETVQGQDVYPAAQQMLIHQGKVLKDPTTLE 60

Query: 41  DNEVSDNSFLVIM 3
           +N+V++NSF+VIM
Sbjct: 61  ENKVAENSFVVIM 73


>gb|EMJ16714.1| hypothetical protein PRUPE_ppa007020mg [Prunus persica]
          Length = 385

 Score =  114 bits (285), Expect = 1e-23
 Identities = 54/73 (73%), Positives = 65/73 (89%)
 Frame = -2

Query: 221 MRLSVKTLKGTNFEIDVKPEDTVAEVKKFIETSQGKDVYPAEQQMLIHQGKILKDNTTLA 42
           M++ VKTLKGTNFEI+VKPE+ VA+VKK IET QG DVYPA QQMLIHQGK+LKD TTL 
Sbjct: 1   MKVFVKTLKGTNFEIEVKPEEMVADVKKIIETVQGADVYPASQQMLIHQGKVLKDTTTLE 60

Query: 41  DNEVSDNSFLVIM 3
           +N+V++NSF+VIM
Sbjct: 61  ENQVAENSFIVIM 73


>ref|XP_006655985.1| PREDICTED: ubiquitin receptor RAD23c-like [Oryza brachyantha]
          Length = 409

 Score =  113 bits (282), Expect = 3e-23
 Identities = 55/73 (75%), Positives = 66/73 (90%)
 Frame = -2

Query: 221 MRLSVKTLKGTNFEIDVKPEDTVAEVKKFIETSQGKDVYPAEQQMLIHQGKILKDNTTLA 42
           M+L VKTLKGTNFEI+  PE +VAEVKK IET+QG++VYPA+QQMLIHQGKILKD+TTL 
Sbjct: 1   MKLFVKTLKGTNFEIEASPEASVAEVKKIIETTQGQNVYPADQQMLIHQGKILKDDTTLE 60

Query: 41  DNEVSDNSFLVIM 3
            N+V++NSFLVIM
Sbjct: 61  GNKVAENSFLVIM 73


>gb|EMJ24290.1| hypothetical protein PRUPE_ppa007032mg [Prunus persica]
          Length = 322

 Score =  113 bits (282), Expect = 3e-23
 Identities = 53/73 (72%), Positives = 67/73 (91%)
 Frame = -2

Query: 221 MRLSVKTLKGTNFEIDVKPEDTVAEVKKFIETSQGKDVYPAEQQMLIHQGKILKDNTTLA 42
           M++ VKTLKGT+F++ VKPEDTV++VKK IETSQG DVYPA QQMLIHQGK+LKD+TTL 
Sbjct: 1   MKIFVKTLKGTHFDVAVKPEDTVSDVKKQIETSQGSDVYPASQQMLIHQGKVLKDSTTLD 60

Query: 41  DNEVSDNSFLVIM 3
           +N+V++NSF+VIM
Sbjct: 61  ENKVAENSFVVIM 73


>gb|EMJ24289.1| hypothetical protein PRUPE_ppa007032mg [Prunus persica]
          Length = 385

 Score =  113 bits (282), Expect = 3e-23
 Identities = 53/73 (72%), Positives = 67/73 (91%)
 Frame = -2

Query: 221 MRLSVKTLKGTNFEIDVKPEDTVAEVKKFIETSQGKDVYPAEQQMLIHQGKILKDNTTLA 42
           M++ VKTLKGT+F++ VKPEDTV++VKK IETSQG DVYPA QQMLIHQGK+LKD+TTL 
Sbjct: 1   MKIFVKTLKGTHFDVAVKPEDTVSDVKKQIETSQGSDVYPASQQMLIHQGKVLKDSTTLD 60

Query: 41  DNEVSDNSFLVIM 3
           +N+V++NSF+VIM
Sbjct: 61  ENKVAENSFVVIM 73


>ref|XP_002516727.1| uv excision repair protein rad23, putative [Ricinus communis]
           gi|223544100|gb|EEF45625.1| uv excision repair protein
           rad23, putative [Ricinus communis]
          Length = 381

 Score =  113 bits (282), Expect = 3e-23
 Identities = 54/73 (73%), Positives = 64/73 (87%)
 Frame = -2

Query: 221 MRLSVKTLKGTNFEIDVKPEDTVAEVKKFIETSQGKDVYPAEQQMLIHQGKILKDNTTLA 42
           M++ VKTLKGTNFEIDVKPEDTV +VK  IE +QG DVYPA QQMLIHQGK+LKD TTL 
Sbjct: 1   MKVFVKTLKGTNFEIDVKPEDTVEDVKNNIEIAQGADVYPASQQMLIHQGKVLKDGTTLE 60

Query: 41  DNEVSDNSFLVIM 3
           +N+V++NSF+VIM
Sbjct: 61  ENKVAENSFIVIM 73


>gb|EXB97156.1| Putative DNA repair protein RAD23-4 [Morus notabilis]
          Length = 550

 Score =  112 bits (281), Expect = 4e-23
 Identities = 54/76 (71%), Positives = 67/76 (88%)
 Frame = -2

Query: 230 EREMRLSVKTLKGTNFEIDVKPEDTVAEVKKFIETSQGKDVYPAEQQMLIHQGKILKDNT 51
           +++M++ VKTLKGT+FEI+VKPEDTVA+VKK IE  QG DVYPA QQMLIHQGK+LKD T
Sbjct: 115 KKKMKICVKTLKGTHFEIEVKPEDTVADVKKNIEVVQGADVYPASQQMLIHQGKVLKDVT 174

Query: 50  TLADNEVSDNSFLVIM 3
           TL +N+V +NSF+VIM
Sbjct: 175 TLEENKVVENSFIVIM 190


>gb|EXB97154.1| Putative DNA repair protein RAD23-3 [Morus notabilis]
          Length = 421

 Score =  112 bits (279), Expect = 7e-23
 Identities = 54/73 (73%), Positives = 64/73 (87%)
 Frame = -2

Query: 221 MRLSVKTLKGTNFEIDVKPEDTVAEVKKFIETSQGKDVYPAEQQMLIHQGKILKDNTTLA 42
           M++ VKTLKGT+FEI+VKPEDTVA+VKK IE  QG DVYPA QQMLIHQGK+LKD TTL 
Sbjct: 1   MKVCVKTLKGTHFEIEVKPEDTVADVKKNIEAVQGADVYPASQQMLIHQGKVLKDTTTLE 60

Query: 41  DNEVSDNSFLVIM 3
           +N+V +NSF+VIM
Sbjct: 61  ENKVVENSFIVIM 73


>ref|XP_002529115.1| uv excision repair protein rad23, putative [Ricinus communis]
           gi|223531394|gb|EEF33228.1| uv excision repair protein
           rad23, putative [Ricinus communis]
          Length = 409

 Score =  112 bits (279), Expect = 7e-23
 Identities = 51/73 (69%), Positives = 67/73 (91%)
 Frame = -2

Query: 221 MRLSVKTLKGTNFEIDVKPEDTVAEVKKFIETSQGKDVYPAEQQMLIHQGKILKDNTTLA 42
           M++ VKTLKGT F+++VKPEDT+A+VKK IET+QG DVYPA QQMLI+QGK+LKDNTT+ 
Sbjct: 1   MKIFVKTLKGTTFDVEVKPEDTIADVKKSIETTQGADVYPAGQQMLIYQGKVLKDNTTID 60

Query: 41  DNEVSDNSFLVIM 3
           +N+V++NSF+VIM
Sbjct: 61  ENKVAENSFVVIM 73


>ref|XP_004232367.1| PREDICTED: putative DNA repair protein RAD23-3-like [Solanum
           lycopersicum] gi|5640111|emb|CAB51544.1| RAD23 protein
           [Solanum lycopersicum var. cerasiforme]
          Length = 389

 Score =  112 bits (279), Expect = 7e-23
 Identities = 53/73 (72%), Positives = 67/73 (91%)
 Frame = -2

Query: 221 MRLSVKTLKGTNFEIDVKPEDTVAEVKKFIETSQGKDVYPAEQQMLIHQGKILKDNTTLA 42
           M++ VKTLKGT+FEI+VKPED+VA+VKK IE+ QG+DVYPA QQMLIHQGK+LKD TTL 
Sbjct: 1   MKIFVKTLKGTHFEIEVKPEDSVADVKKNIESVQGQDVYPAAQQMLIHQGKVLKDTTTLE 60

Query: 41  DNEVSDNSFLVIM 3
           +N+V++NSF+VIM
Sbjct: 61  ENKVAENSFVVIM 73


>gb|ABD96960.1| hypothetical protein [Cleome spinosa]
          Length = 435

 Score =  111 bits (278), Expect = 9e-23
 Identities = 53/73 (72%), Positives = 65/73 (89%)
 Frame = -2

Query: 221 MRLSVKTLKGTNFEIDVKPEDTVAEVKKFIETSQGKDVYPAEQQMLIHQGKILKDNTTLA 42
           M++ VKTLKGT+FEI+VKPEDTVA+VKK IET Q  DVYPA QQMLIHQGK+LKD TT+ 
Sbjct: 1   MKIFVKTLKGTHFEIEVKPEDTVADVKKNIETVQSPDVYPAAQQMLIHQGKVLKDETTME 60

Query: 41  DNEVSDNSFLVIM 3
           +N+V++NSF+VIM
Sbjct: 61  ENKVAENSFIVIM 73


>ref|XP_006363121.1| PREDICTED: ubiquitin receptor RAD23c-like [Solanum tuberosum]
          Length = 390

 Score =  111 bits (277), Expect = 1e-22
 Identities = 53/73 (72%), Positives = 67/73 (91%)
 Frame = -2

Query: 221 MRLSVKTLKGTNFEIDVKPEDTVAEVKKFIETSQGKDVYPAEQQMLIHQGKILKDNTTLA 42
           M++ VKTLKGT+FEI+VKPED+VA+VKK IE+ QG+DVYPA QQMLIHQGK+LKD TTL 
Sbjct: 1   MKIFVKTLKGTHFEIEVKPEDSVADVKKNIESVQGQDVYPAAQQMLIHQGKVLKDATTLE 60

Query: 41  DNEVSDNSFLVIM 3
           +N+V++NSF+VIM
Sbjct: 61  ENKVAENSFVVIM 73


>gb|ABB02636.1| RAD23-like [Solanum tuberosum]
          Length = 384

 Score =  110 bits (276), Expect = 1e-22
 Identities = 54/73 (73%), Positives = 66/73 (90%)
 Frame = -2

Query: 221 MRLSVKTLKGTNFEIDVKPEDTVAEVKKFIETSQGKDVYPAEQQMLIHQGKILKDNTTLA 42
           M++ VKTLKGT+FEI+VKPEDTVA+VKK IET QG+DVYPA QQMLIHQ K+LKD TTL 
Sbjct: 1   MKIFVKTLKGTHFEIEVKPEDTVADVKKSIETVQGQDVYPAAQQMLIHQVKVLKDPTTLD 60

Query: 41  DNEVSDNSFLVIM 3
           +N+V++NSF+VIM
Sbjct: 61  ENKVAENSFVVIM 73


>ref|XP_006367045.1| PREDICTED: ubiquitin receptor RAD23c-like [Solanum tuberosum]
          Length = 398

 Score =  110 bits (275), Expect = 2e-22
 Identities = 52/73 (71%), Positives = 66/73 (90%)
 Frame = -2

Query: 221 MRLSVKTLKGTNFEIDVKPEDTVAEVKKFIETSQGKDVYPAEQQMLIHQGKILKDNTTLA 42
           M++ VKTLKG++FEI+VKPEDTVA+VKK IET QG DVYPA QQMLIHQGK+LKD TTL 
Sbjct: 1   MKIFVKTLKGSHFEIEVKPEDTVADVKKNIETVQGSDVYPAAQQMLIHQGKVLKDGTTLE 60

Query: 41  DNEVSDNSFLVIM 3
           +N+V++++F+VIM
Sbjct: 61  ENKVAESNFIVIM 73


>ref|XP_004236965.1| PREDICTED: putative DNA repair protein RAD23-3-like [Solanum
           lycopersicum]
          Length = 409

 Score =  110 bits (275), Expect = 2e-22
 Identities = 52/73 (71%), Positives = 66/73 (90%)
 Frame = -2

Query: 221 MRLSVKTLKGTNFEIDVKPEDTVAEVKKFIETSQGKDVYPAEQQMLIHQGKILKDNTTLA 42
           M++ VKTLKG++FEI+VKPEDTVA+VKK IET QG DVYPA QQMLIHQGK+LKD TTL 
Sbjct: 1   MKIFVKTLKGSHFEIEVKPEDTVADVKKNIETVQGSDVYPAAQQMLIHQGKVLKDGTTLE 60

Query: 41  DNEVSDNSFLVIM 3
           +N+V++++F+VIM
Sbjct: 61  ENKVAESNFIVIM 73


>ref|NP_001057334.1| Os06g0264300 [Oryza sativa Japonica Group]
           gi|53793157|dbj|BAD54365.1| putative RAD23 protein
           [Oryza sativa Japonica Group]
           gi|53793163|dbj|BAD54370.1| putative RAD23 protein
           [Oryza sativa Japonica Group]
           gi|113595374|dbj|BAF19248.1| Os06g0264300 [Oryza sativa
           Japonica Group] gi|125596775|gb|EAZ36555.1| hypothetical
           protein OsJ_20893 [Oryza sativa Japonica Group]
           gi|215692584|dbj|BAG88004.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 413

 Score =  110 bits (275), Expect = 2e-22
 Identities = 53/73 (72%), Positives = 66/73 (90%)
 Frame = -2

Query: 221 MRLSVKTLKGTNFEIDVKPEDTVAEVKKFIETSQGKDVYPAEQQMLIHQGKILKDNTTLA 42
           M+L VKTLKGTNFEI+  PE +VAEVK+ IE++QG++VYPA+QQMLIHQGKILKD+TTL 
Sbjct: 1   MKLFVKTLKGTNFEIEASPEASVAEVKRIIESTQGQNVYPADQQMLIHQGKILKDDTTLE 60

Query: 41  DNEVSDNSFLVIM 3
            N+V++NSFLVIM
Sbjct: 61  GNKVAENSFLVIM 73


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