BLASTX nr result
ID: Zingiber23_contig00038442
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00038442
(218 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI16226.3| unnamed protein product [Vitis vinifera] 147 2e-33
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 147 2e-33
gb|ACJ63310.1| RNA polymerase III large subunit [Liriodendron tu... 144 9e-33
ref|XP_002300065.1| DNA-directed RNA polymerase family protein [... 144 9e-33
ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [A... 144 1e-32
gb|AAS79693.1| RNA polymerase III large subunit [Podocarpus macr... 144 2e-32
gb|ACJ63306.1| RNA polymerase III large subunit [Acorus calamus] 143 3e-32
ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III s... 142 5e-32
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s... 142 5e-32
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s... 142 5e-32
gb|AAS79695.1| RNA polymerase III large subunit [Cycas revoluta] 142 5e-32
gb|AAS79698.1| RNA polymerase III large subunit [Psilotum nudum] 142 5e-32
gb|AAS79691.1| RNA polymerase III large subunit [Thuja occidenta... 142 5e-32
gb|AAS79696.1| RNA polymerase III large subunit [Zamia muricata] 142 5e-32
tpg|DAA37181.1| TPA: putative DNA-directed RNA polymerase family... 142 6e-32
ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [S... 142 6e-32
gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao] 141 8e-32
ref|XP_006279465.1| hypothetical protein CARUB_v10025743mg [Caps... 141 8e-32
gb|AAS79690.1| RNA polymerase III large subunit [Ephedra viridis] 141 8e-32
dbj|BAA96933.1| DNA-directed RNA polymerase II largest chain [Ar... 141 8e-32
>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
Length = 1819
Score = 147 bits (370), Expect = 2e-33
Identities = 69/72 (95%), Positives = 72/72 (100%)
Frame = +1
Query: 1 DGYVYFRNSELISGQLGKATLGNGNKDGLFSVLLRDYNSHAAASCMNRLAKLSARWIGNH 180
DG+VYFRNSELISGQLGKATLGNGNKDGLFSVLLRDYN+HAAA+CMNRLAKLSARWIGNH
Sbjct: 632 DGFVYFRNSELISGQLGKATLGNGNKDGLFSVLLRDYNAHAAAACMNRLAKLSARWIGNH 691
Query: 181 GFSIGIDDVQPG 216
GFSIGIDDVQPG
Sbjct: 692 GFSIGIDDVQPG 703
>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
vinifera]
Length = 1383
Score = 147 bits (370), Expect = 2e-33
Identities = 69/72 (95%), Positives = 72/72 (100%)
Frame = +1
Query: 1 DGYVYFRNSELISGQLGKATLGNGNKDGLFSVLLRDYNSHAAASCMNRLAKLSARWIGNH 180
DG+VYFRNSELISGQLGKATLGNGNKDGLFSVLLRDYN+HAAA+CMNRLAKLSARWIGNH
Sbjct: 632 DGFVYFRNSELISGQLGKATLGNGNKDGLFSVLLRDYNAHAAAACMNRLAKLSARWIGNH 691
Query: 181 GFSIGIDDVQPG 216
GFSIGIDDVQPG
Sbjct: 692 GFSIGIDDVQPG 703
>gb|ACJ63310.1| RNA polymerase III large subunit [Liriodendron tulipifera]
Length = 546
Score = 144 bits (364), Expect = 9e-33
Identities = 68/72 (94%), Positives = 70/72 (97%)
Frame = +1
Query: 1 DGYVYFRNSELISGQLGKATLGNGNKDGLFSVLLRDYNSHAAASCMNRLAKLSARWIGNH 180
DGYVYFRNSEL+ GQLGKATLGNGNKDGLFSVLLRDY +HAAASCMNRLAKLSARWIGNH
Sbjct: 128 DGYVYFRNSELLCGQLGKATLGNGNKDGLFSVLLRDYGAHAAASCMNRLAKLSARWIGNH 187
Query: 181 GFSIGIDDVQPG 216
GFSIGIDDVQPG
Sbjct: 188 GFSIGIDDVQPG 199
>ref|XP_002300065.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|222847323|gb|EEE84870.1| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 1394
Score = 144 bits (364), Expect = 9e-33
Identities = 67/72 (93%), Positives = 72/72 (100%)
Frame = +1
Query: 1 DGYVYFRNSELISGQLGKATLGNGNKDGLFSVLLRDYNSHAAASCMNRLAKLSARWIGNH 180
DGYVYFRNSELISGQLGKATLGNGNKDGL+S+LLRDYN++AAA+CMNRLAKLSARWIGNH
Sbjct: 639 DGYVYFRNSELISGQLGKATLGNGNKDGLYSILLRDYNAYAAATCMNRLAKLSARWIGNH 698
Query: 181 GFSIGIDDVQPG 216
GFSIGIDDVQPG
Sbjct: 699 GFSIGIDDVQPG 710
>ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [Amborella trichopoda]
gi|548832896|gb|ERM95665.1| hypothetical protein
AMTR_s00023p00196820 [Amborella trichopoda]
Length = 1383
Score = 144 bits (363), Expect = 1e-32
Identities = 69/72 (95%), Positives = 70/72 (97%)
Frame = +1
Query: 1 DGYVYFRNSELISGQLGKATLGNGNKDGLFSVLLRDYNSHAAASCMNRLAKLSARWIGNH 180
DG+VY RNSELISGQLGKATLGNGNKDGLFSVLLRDYNSHAAASCMNRLAKLSARWIGNH
Sbjct: 626 DGFVYIRNSELISGQLGKATLGNGNKDGLFSVLLRDYNSHAAASCMNRLAKLSARWIGNH 685
Query: 181 GFSIGIDDVQPG 216
GFSIGIDDV PG
Sbjct: 686 GFSIGIDDVLPG 697
>gb|AAS79693.1| RNA polymerase III large subunit [Podocarpus macrophyllus]
Length = 546
Score = 144 bits (362), Expect = 2e-32
Identities = 68/72 (94%), Positives = 71/72 (98%)
Frame = +1
Query: 1 DGYVYFRNSELISGQLGKATLGNGNKDGLFSVLLRDYNSHAAASCMNRLAKLSARWIGNH 180
DG VYFRNSELISGQ+GKATLGNGNK+GLFS+LLRDYNSHAAASCMNRLAKLSARWIGNH
Sbjct: 128 DGCVYFRNSELISGQVGKATLGNGNKNGLFSILLRDYNSHAAASCMNRLAKLSARWIGNH 187
Query: 181 GFSIGIDDVQPG 216
GFSIGIDDVQPG
Sbjct: 188 GFSIGIDDVQPG 199
>gb|ACJ63306.1| RNA polymerase III large subunit [Acorus calamus]
Length = 544
Score = 143 bits (360), Expect = 3e-32
Identities = 67/72 (93%), Positives = 70/72 (97%)
Frame = +1
Query: 1 DGYVYFRNSELISGQLGKATLGNGNKDGLFSVLLRDYNSHAAASCMNRLAKLSARWIGNH 180
D +VYFRNS+L+ GQLGKATLGNGNKDGLFSVLLRDYNSHAAASCMNRLAKLSARWIGNH
Sbjct: 128 DAFVYFRNSDLLCGQLGKATLGNGNKDGLFSVLLRDYNSHAAASCMNRLAKLSARWIGNH 187
Query: 181 GFSIGIDDVQPG 216
GFSIGIDDVQPG
Sbjct: 188 GFSIGIDDVQPG 199
>ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
isoform X2 [Solanum tuberosum]
Length = 1243
Score = 142 bits (358), Expect = 5e-32
Identities = 67/72 (93%), Positives = 70/72 (97%)
Frame = +1
Query: 1 DGYVYFRNSELISGQLGKATLGNGNKDGLFSVLLRDYNSHAAASCMNRLAKLSARWIGNH 180
DG+VYFRNSELISGQLGKATLGNGNKDGL+SVLLRDY SHAAA+CMNRLAKLSARWIGNH
Sbjct: 627 DGFVYFRNSELISGQLGKATLGNGNKDGLYSVLLRDYKSHAAATCMNRLAKLSARWIGNH 686
Query: 181 GFSIGIDDVQPG 216
GFSIGIDDV PG
Sbjct: 687 GFSIGIDDVTPG 698
>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
isoform X1 [Solanum tuberosum]
Length = 1394
Score = 142 bits (358), Expect = 5e-32
Identities = 67/72 (93%), Positives = 70/72 (97%)
Frame = +1
Query: 1 DGYVYFRNSELISGQLGKATLGNGNKDGLFSVLLRDYNSHAAASCMNRLAKLSARWIGNH 180
DG+VYFRNSELISGQLGKATLGNGNKDGL+SVLLRDY SHAAA+CMNRLAKLSARWIGNH
Sbjct: 627 DGFVYFRNSELISGQLGKATLGNGNKDGLYSVLLRDYKSHAAATCMNRLAKLSARWIGNH 686
Query: 181 GFSIGIDDVQPG 216
GFSIGIDDV PG
Sbjct: 687 GFSIGIDDVTPG 698
>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Solanum lycopersicum]
Length = 1390
Score = 142 bits (358), Expect = 5e-32
Identities = 67/72 (93%), Positives = 70/72 (97%)
Frame = +1
Query: 1 DGYVYFRNSELISGQLGKATLGNGNKDGLFSVLLRDYNSHAAASCMNRLAKLSARWIGNH 180
DG+VYFRNSELISGQLGKATLGNGNKDGL+SVLLRDY SHAAA+CMNRLAKLSARWIGNH
Sbjct: 627 DGFVYFRNSELISGQLGKATLGNGNKDGLYSVLLRDYESHAAATCMNRLAKLSARWIGNH 686
Query: 181 GFSIGIDDVQPG 216
GFSIGIDDV PG
Sbjct: 687 GFSIGIDDVTPG 698
>gb|AAS79695.1| RNA polymerase III large subunit [Cycas revoluta]
Length = 548
Score = 142 bits (358), Expect = 5e-32
Identities = 67/72 (93%), Positives = 71/72 (98%)
Frame = +1
Query: 1 DGYVYFRNSELISGQLGKATLGNGNKDGLFSVLLRDYNSHAAASCMNRLAKLSARWIGNH 180
DG+VYFRNSELISGQ+GKATLGNGNKDGLF+VLLRDYN+HAAAS MNRLAKLSARWIGNH
Sbjct: 128 DGFVYFRNSELISGQIGKATLGNGNKDGLFTVLLRDYNTHAAASSMNRLAKLSARWIGNH 187
Query: 181 GFSIGIDDVQPG 216
GFSIGIDDVQPG
Sbjct: 188 GFSIGIDDVQPG 199
>gb|AAS79698.1| RNA polymerase III large subunit [Psilotum nudum]
Length = 549
Score = 142 bits (358), Expect = 5e-32
Identities = 66/72 (91%), Positives = 71/72 (98%)
Frame = +1
Query: 1 DGYVYFRNSELISGQLGKATLGNGNKDGLFSVLLRDYNSHAAASCMNRLAKLSARWIGNH 180
DGYVYFRNSELISGQLGK TLGNGNK+GLF++LLRDYN++AAASCMNRLAKLSARWIGNH
Sbjct: 129 DGYVYFRNSELISGQLGKGTLGNGNKNGLFTILLRDYNTYAAASCMNRLAKLSARWIGNH 188
Query: 181 GFSIGIDDVQPG 216
GFSIGIDDVQPG
Sbjct: 189 GFSIGIDDVQPG 200
>gb|AAS79691.1| RNA polymerase III large subunit [Thuja occidentalis]
Length = 546
Score = 142 bits (358), Expect = 5e-32
Identities = 66/72 (91%), Positives = 70/72 (97%)
Frame = +1
Query: 1 DGYVYFRNSELISGQLGKATLGNGNKDGLFSVLLRDYNSHAAASCMNRLAKLSARWIGNH 180
DG VYFRNSEL+SGQ+GKATLGNGNKDGLF++LLRDYNSHAAA CMNRLAKLSARWIGNH
Sbjct: 128 DGCVYFRNSELLSGQIGKATLGNGNKDGLFTILLRDYNSHAAACCMNRLAKLSARWIGNH 187
Query: 181 GFSIGIDDVQPG 216
GFSIGIDDVQPG
Sbjct: 188 GFSIGIDDVQPG 199
>gb|AAS79696.1| RNA polymerase III large subunit [Zamia muricata]
Length = 548
Score = 142 bits (358), Expect = 5e-32
Identities = 67/72 (93%), Positives = 71/72 (98%)
Frame = +1
Query: 1 DGYVYFRNSELISGQLGKATLGNGNKDGLFSVLLRDYNSHAAASCMNRLAKLSARWIGNH 180
DG+VYFRNSELISGQ+GKATLGNGNKDGLF+VLLRDYN+HAAAS MNRLAKLSARWIGNH
Sbjct: 128 DGFVYFRNSELISGQIGKATLGNGNKDGLFTVLLRDYNTHAAASSMNRLAKLSARWIGNH 187
Query: 181 GFSIGIDDVQPG 216
GFSIGIDDVQPG
Sbjct: 188 GFSIGIDDVQPG 199
>tpg|DAA37181.1| TPA: putative DNA-directed RNA polymerase family protein [Zea mays]
Length = 1030
Score = 142 bits (357), Expect = 6e-32
Identities = 66/72 (91%), Positives = 71/72 (98%)
Frame = +1
Query: 1 DGYVYFRNSELISGQLGKATLGNGNKDGLFSVLLRDYNSHAAASCMNRLAKLSARWIGNH 180
DGYVYFRNSEL+SGQ+GKATLGNGNKDGL+SVLLRDYNSHAAASCMNRLAK SAR+IGNH
Sbjct: 636 DGYVYFRNSELLSGQVGKATLGNGNKDGLYSVLLRDYNSHAAASCMNRLAKFSARFIGNH 695
Query: 181 GFSIGIDDVQPG 216
GFSIG+DDVQPG
Sbjct: 696 GFSIGVDDVQPG 707
>ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor]
gi|241937900|gb|EES11045.1| hypothetical protein
SORBIDRAFT_06g021120 [Sorghum bicolor]
Length = 1391
Score = 142 bits (357), Expect = 6e-32
Identities = 66/72 (91%), Positives = 71/72 (98%)
Frame = +1
Query: 1 DGYVYFRNSELISGQLGKATLGNGNKDGLFSVLLRDYNSHAAASCMNRLAKLSARWIGNH 180
DGYVYFRNSEL+SGQ+GKATLGNGNKDGL+SVLLRDYNSHAAASCMNRLAK SAR+IGNH
Sbjct: 633 DGYVYFRNSELLSGQVGKATLGNGNKDGLYSVLLRDYNSHAAASCMNRLAKFSARFIGNH 692
Query: 181 GFSIGIDDVQPG 216
GFSIG+DDVQPG
Sbjct: 693 GFSIGVDDVQPG 704
>gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao]
Length = 1395
Score = 141 bits (356), Expect = 8e-32
Identities = 66/72 (91%), Positives = 70/72 (97%)
Frame = +1
Query: 1 DGYVYFRNSELISGQLGKATLGNGNKDGLFSVLLRDYNSHAAASCMNRLAKLSARWIGNH 180
DG+VY RNSELI GQLGKATLGNGNKDGL+SVLLRDYN+HAAA+CMNRLAKLSARWIGNH
Sbjct: 638 DGFVYIRNSELICGQLGKATLGNGNKDGLYSVLLRDYNAHAAAACMNRLAKLSARWIGNH 697
Query: 181 GFSIGIDDVQPG 216
GFSIGIDDVQPG
Sbjct: 698 GFSIGIDDVQPG 709
>ref|XP_006279465.1| hypothetical protein CARUB_v10025743mg [Capsella rubella]
gi|482548169|gb|EOA12363.1| hypothetical protein
CARUB_v10025743mg [Capsella rubella]
Length = 1376
Score = 141 bits (356), Expect = 8e-32
Identities = 67/72 (93%), Positives = 70/72 (97%)
Frame = +1
Query: 1 DGYVYFRNSELISGQLGKATLGNGNKDGLFSVLLRDYNSHAAASCMNRLAKLSARWIGNH 180
DG+VYFRNSELISGQLGKATLGNGNKDGL+S+LLRDYNSHAAA CMNRLAKLSARWIG H
Sbjct: 636 DGWVYFRNSELISGQLGKATLGNGNKDGLYSILLRDYNSHAAAVCMNRLAKLSARWIGIH 695
Query: 181 GFSIGIDDVQPG 216
GFSIGIDDVQPG
Sbjct: 696 GFSIGIDDVQPG 707
>gb|AAS79690.1| RNA polymerase III large subunit [Ephedra viridis]
Length = 548
Score = 141 bits (356), Expect = 8e-32
Identities = 68/72 (94%), Positives = 70/72 (97%)
Frame = +1
Query: 1 DGYVYFRNSELISGQLGKATLGNGNKDGLFSVLLRDYNSHAAASCMNRLAKLSARWIGNH 180
DG VYFRNSELISGQLGKATLGNGNK GLFSVLLRDYN++AAASCMNRLAKLSARWIGNH
Sbjct: 128 DGCVYFRNSELISGQLGKATLGNGNKSGLFSVLLRDYNAYAAASCMNRLAKLSARWIGNH 187
Query: 181 GFSIGIDDVQPG 216
GFSIGIDDVQPG
Sbjct: 188 GFSIGIDDVQPG 199
>dbj|BAA96933.1| DNA-directed RNA polymerase II largest chain [Arabidopsis thaliana]
Length = 1383
Score = 141 bits (356), Expect = 8e-32
Identities = 67/72 (93%), Positives = 70/72 (97%)
Frame = +1
Query: 1 DGYVYFRNSELISGQLGKATLGNGNKDGLFSVLLRDYNSHAAASCMNRLAKLSARWIGNH 180
DG+VYFRNSELISGQLGKATLGNGNKDGL+S+LLRDYNSHAAA CMNRLAKLSARWIG H
Sbjct: 636 DGWVYFRNSELISGQLGKATLGNGNKDGLYSILLRDYNSHAAAVCMNRLAKLSARWIGIH 695
Query: 181 GFSIGIDDVQPG 216
GFSIGIDDVQPG
Sbjct: 696 GFSIGIDDVQPG 707