BLASTX nr result
ID: Zingiber23_contig00038441
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00038441
(385 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAS79693.1| RNA polymerase III large subunit [Podocarpus macr... 215 4e-54
ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [S... 215 6e-54
tpg|DAA37181.1| TPA: putative DNA-directed RNA polymerase family... 214 1e-53
gb|AAS79691.1| RNA polymerase III large subunit [Thuja occidenta... 213 2e-53
ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III s... 212 5e-53
gb|AAS79692.1| RNA polymerase III large subunit [Taxus canadensis] 211 6e-53
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 211 6e-53
gb|AAS79698.1| RNA polymerase III large subunit [Psilotum nudum] 211 8e-53
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s... 210 1e-52
ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III s... 210 1e-52
ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [A... 210 2e-52
ref|XP_004169848.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 209 3e-52
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s... 209 3e-52
ref|XP_002531828.1| DNA-directed RNA polymerase III largest subu... 209 3e-52
gb|AAS79689.1| RNA polymerase III large subunit [Welwitschia mir... 209 4e-52
gb|ACJ63311.1| RNA polymerase III large subunit [Papaver orientale] 207 9e-52
gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Mor... 207 1e-51
gb|AAS79695.1| RNA polymerase III large subunit [Cycas revoluta] 207 1e-51
ref|XP_003570766.1| PREDICTED: DNA-directed RNA polymerase III s... 207 1e-51
emb|CBI16226.3| unnamed protein product [Vitis vinifera] 207 1e-51
>gb|AAS79693.1| RNA polymerase III large subunit [Podocarpus macrophyllus]
Length = 546
Score = 215 bits (548), Expect = 4e-54
Identities = 105/129 (81%), Positives = 115/129 (89%), Gaps = 1/129 (0%)
Frame = +2
Query: 2 DTFYDRAAFSLMCCYMGDAMDHVDLPVPAIMKPVELWTGKQLFSVLVRPNAHTKAFVNLI 181
DTFYDRAAFSLMC YMG+A +H+DLP PAI+KP+ELWTGKQLFSVLVRPN + FVNLI
Sbjct: 52 DTFYDRAAFSLMCSYMGNAAEHIDLPTPAILKPIELWTGKQLFSVLVRPNTKMRVFVNLI 111
Query: 182 VKEKIYTKY-ETMCPSDGYVYFRNSELISGQVGKATLGNDNKDGLFSVLLRDYNSHAAAS 358
V EK Y+K ETMCP+DG VYFRNSELISGQVGKATLGN NK+GLFS+LLRDYNSHAAAS
Sbjct: 112 VMEKNYSKCGETMCPNDGCVYFRNSELISGQVGKATLGNGNKNGLFSILLRDYNSHAAAS 171
Query: 359 CKNRLAKLS 385
C NRLAKLS
Sbjct: 172 CMNRLAKLS 180
>ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor]
gi|241937900|gb|EES11045.1| hypothetical protein
SORBIDRAFT_06g021120 [Sorghum bicolor]
Length = 1391
Score = 215 bits (547), Expect = 6e-54
Identities = 102/142 (71%), Positives = 120/142 (84%), Gaps = 14/142 (9%)
Frame = +2
Query: 2 DTFYDRAAFSLMCCYMGDAMDHVDLPVPAIMKPVELWTGKQLFSVLVRPNAHTKAFVNLI 181
DTFYDR++F+L+C Y+GDAM+++DLP PA++KP+ELWTGKQLFSVLVRPNAHT+ F+NL
Sbjct: 544 DTFYDRSSFTLLCSYLGDAMENIDLPTPALIKPIELWTGKQLFSVLVRPNAHTRVFLNLA 603
Query: 182 VKEKIYTK--------------YETMCPSDGYVYFRNSELISGQVGKATLGNDNKDGLFS 319
V+EKIY+K ETMCP+DGYVYFRNSEL+SGQVGKATLGN NKDGL+S
Sbjct: 604 VQEKIYSKKKGKKEAGEETMCGRETMCPNDGYVYFRNSELLSGQVGKATLGNGNKDGLYS 663
Query: 320 VLLRDYNSHAAASCKNRLAKLS 385
VLLRDYNSHAAASC NRLAK S
Sbjct: 664 VLLRDYNSHAAASCMNRLAKFS 685
>tpg|DAA37181.1| TPA: putative DNA-directed RNA polymerase family protein [Zea mays]
Length = 1030
Score = 214 bits (544), Expect = 1e-53
Identities = 103/145 (71%), Positives = 119/145 (82%), Gaps = 17/145 (11%)
Frame = +2
Query: 2 DTFYDRAAFSLMCCYMGDAMDHVDLPVPAIMKPVELWTGKQLFSVLVRPNAHTKAFVNLI 181
DTFYDR++F+L+C Y+GD M+++DLP PA++KPVELWTGKQLFSVLVRPNAHTK F+NL
Sbjct: 544 DTFYDRSSFTLLCSYLGDGMENIDLPTPALIKPVELWTGKQLFSVLVRPNAHTKVFLNLA 603
Query: 182 VKEKIYTK-----------------YETMCPSDGYVYFRNSELISGQVGKATLGNDNKDG 310
V+EKIY+K ETMCP+DGYVYFRNSEL+SGQVGKATLGN NKDG
Sbjct: 604 VQEKIYSKKKGKKEGGEEVKETMCGRETMCPNDGYVYFRNSELLSGQVGKATLGNGNKDG 663
Query: 311 LFSVLLRDYNSHAAASCKNRLAKLS 385
L+SVLLRDYNSHAAASC NRLAK S
Sbjct: 664 LYSVLLRDYNSHAAASCMNRLAKFS 688
>gb|AAS79691.1| RNA polymerase III large subunit [Thuja occidentalis]
Length = 546
Score = 213 bits (542), Expect = 2e-53
Identities = 102/129 (79%), Positives = 114/129 (88%), Gaps = 1/129 (0%)
Frame = +2
Query: 2 DTFYDRAAFSLMCCYMGDAMDHVDLPVPAIMKPVELWTGKQLFSVLVRPNAHTKAFVNLI 181
DTFYDRAAF LMC YMGDA +H+DLP PAI+KP+ELWTGKQLF+VLVRPNA + FVNLI
Sbjct: 52 DTFYDRAAFLLMCTYMGDASEHIDLPTPAILKPIELWTGKQLFTVLVRPNAKMRVFVNLI 111
Query: 182 VKEKIYTKY-ETMCPSDGYVYFRNSELISGQVGKATLGNDNKDGLFSVLLRDYNSHAAAS 358
V EK Y+K ETMCP+DG VYFRNSEL+SGQ+GKATLGN NKDGLF++LLRDYNSHAAA
Sbjct: 112 VMEKNYSKSGETMCPNDGCVYFRNSELLSGQIGKATLGNGNKDGLFTILLRDYNSHAAAC 171
Query: 359 CKNRLAKLS 385
C NRLAKLS
Sbjct: 172 CMNRLAKLS 180
>ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Oryza
brachyantha]
Length = 1389
Score = 212 bits (539), Expect = 5e-53
Identities = 98/129 (75%), Positives = 117/129 (90%), Gaps = 1/129 (0%)
Frame = +2
Query: 2 DTFYDRAAFSLMCCYMGDAMDHVDLPVPAIMKPVELWTGKQLFSVLVRPNAHTKAFVNLI 181
D FYDR++F+L+C Y+GDAM+++DLP PA++KP+ELWTGKQLFSVLVRPNA TK F+NL
Sbjct: 544 DNFYDRSSFTLLCSYLGDAMENIDLPTPALVKPIELWTGKQLFSVLVRPNACTKVFLNLT 603
Query: 182 VKEKIYTK-YETMCPSDGYVYFRNSELISGQVGKATLGNDNKDGLFSVLLRDYNSHAAAS 358
VKEKIY+K ETMCP+DG+VYFRNSEL+SGQVGK TLGN NKDG+FS+L+RDYNSHAAAS
Sbjct: 604 VKEKIYSKSRETMCPNDGFVYFRNSELLSGQVGKKTLGNGNKDGMFSILVRDYNSHAAAS 663
Query: 359 CKNRLAKLS 385
C NRLAK S
Sbjct: 664 CMNRLAKFS 672
>gb|AAS79692.1| RNA polymerase III large subunit [Taxus canadensis]
Length = 546
Score = 211 bits (538), Expect = 6e-53
Identities = 102/129 (79%), Positives = 115/129 (89%), Gaps = 1/129 (0%)
Frame = +2
Query: 2 DTFYDRAAFSLMCCYMGDAMDHVDLPVPAIMKPVELWTGKQLFSVLVRPNAHTKAFVNLI 181
DTFYDRAAFSLMC YMGDA +H+DLP PAI+KP+ELWTGKQLF+VLVRPNA + FVNLI
Sbjct: 52 DTFYDRAAFSLMCSYMGDASEHIDLPTPAILKPIELWTGKQLFTVLVRPNAKMRVFVNLI 111
Query: 182 VKEKIYTKY-ETMCPSDGYVYFRNSELISGQVGKATLGNDNKDGLFSVLLRDYNSHAAAS 358
V EK Y+K ETMCP+DG V+FRNSEL+SGQ+GKATLGN NK+GLF+VLLRDYNSHAAA
Sbjct: 112 VMEKNYSKSGETMCPNDGRVFFRNSELLSGQLGKATLGNGNKNGLFTVLLRDYNSHAAAC 171
Query: 359 CKNRLAKLS 385
C NRLAKLS
Sbjct: 172 CMNRLAKLS 180
>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
vinifera]
Length = 1383
Score = 211 bits (538), Expect = 6e-53
Identities = 103/131 (78%), Positives = 115/131 (87%), Gaps = 3/131 (2%)
Frame = +2
Query: 2 DTFYDRAAFSLMCCYMGDAMDHVDLPVPAIMKPVELWTGKQLFSVLVRPNAHTKAFVNLI 181
DTFYDRAAFSLMC YMGD MD VDLP PAI+KPVELWTGKQLF+VL+RP+A+ + ++NL
Sbjct: 554 DTFYDRAAFSLMCSYMGDGMDLVDLPTPAIIKPVELWTGKQLFNVLLRPHANVRVYLNLT 613
Query: 182 VKEKIYTKY---ETMCPSDGYVYFRNSELISGQVGKATLGNDNKDGLFSVLLRDYNSHAA 352
V EK Y K ETMCPSDG+VYFRNSELISGQ+GKATLGN NKDGLFSVLLRDYN+HAA
Sbjct: 614 VMEKTYNKRRGKETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLFSVLLRDYNAHAA 673
Query: 353 ASCKNRLAKLS 385
A+C NRLAKLS
Sbjct: 674 AACMNRLAKLS 684
>gb|AAS79698.1| RNA polymerase III large subunit [Psilotum nudum]
Length = 549
Score = 211 bits (537), Expect = 8e-53
Identities = 100/130 (76%), Positives = 114/130 (87%), Gaps = 2/130 (1%)
Frame = +2
Query: 2 DTFYDRAAFSLMCCYMGDAMDHVDLPVPAIMKPVELWTGKQLFSVLVRPNAHTKAFVNLI 181
DTFYDR AF LMC YMGD +H+DLP PAI+KPVELWTGKQLFSVLVRPNA T+ FVNL+
Sbjct: 52 DTFYDRGAFGLMCSYMGDGAEHIDLPTPAILKPVELWTGKQLFSVLVRPNASTRVFVNLV 111
Query: 182 VKEKIYTKY--ETMCPSDGYVYFRNSELISGQVGKATLGNDNKDGLFSVLLRDYNSHAAA 355
V EK Y+K +TMCP+DGYVYFRNSELISGQ+GK TLGN NK+GLF++LLRDYN++AAA
Sbjct: 112 VMEKNYSKSGGDTMCPNDGYVYFRNSELISGQLGKGTLGNGNKNGLFTILLRDYNTYAAA 171
Query: 356 SCKNRLAKLS 385
SC NRLAKLS
Sbjct: 172 SCMNRLAKLS 181
>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
isoform X1 [Citrus sinensis]
gi|568870034|ref|XP_006488217.1| PREDICTED: DNA-directed
RNA polymerase III subunit rpc1-like isoform X2 [Citrus
sinensis]
Length = 1404
Score = 210 bits (535), Expect = 1e-52
Identities = 101/140 (72%), Positives = 115/140 (82%), Gaps = 12/140 (8%)
Frame = +2
Query: 2 DTFYDRAAFSLMCCYMGDAMDHVDLPVPAIMKPVELWTGKQLFSVLVRPNAHTKAFVNLI 181
DTFYDRAAFSLMCCYMGD MD VDLP PAI+KPVELWTGKQLFSVL+RP+A+ + +VNL
Sbjct: 558 DTFYDRAAFSLMCCYMGDGMDRVDLPTPAILKPVELWTGKQLFSVLIRPHANMRVYVNLT 617
Query: 182 VKEKIYT------------KYETMCPSDGYVYFRNSELISGQVGKATLGNDNKDGLFSVL 325
VKEK Y+ + ETMCP+DG+VYFRNSELISGQ+GKATLGN NKDGL+SVL
Sbjct: 618 VKEKTYSNKLIRTEGDEEIRIETMCPNDGFVYFRNSELISGQLGKATLGNGNKDGLYSVL 677
Query: 326 LRDYNSHAAASCKNRLAKLS 385
LRDY +HA + C NRLAKLS
Sbjct: 678 LRDYGAHATSGCMNRLAKLS 697
>ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Setaria italica]
Length = 1397
Score = 210 bits (535), Expect = 1e-52
Identities = 101/145 (69%), Positives = 118/145 (81%), Gaps = 17/145 (11%)
Frame = +2
Query: 2 DTFYDRAAFSLMCCYMGDAMDHVDLPVPAIMKPVELWTGKQLFSVLVRPNAHTKAFVNLI 181
D FYDR++F+L+C Y+GDAM+++DLP PA++KP+ELWTGKQLFSVLVRPNA TK F+NL
Sbjct: 547 DAFYDRSSFALLCSYVGDAMENIDLPTPALIKPIELWTGKQLFSVLVRPNARTKVFLNLA 606
Query: 182 VKEKIYTK-----------------YETMCPSDGYVYFRNSELISGQVGKATLGNDNKDG 310
VKEKIY+K ETMCP+DGYVYFRNSEL+SGQVGKATLGN NKDG
Sbjct: 607 VKEKIYSKKKEKKEGEEEEKETMCGRETMCPNDGYVYFRNSELLSGQVGKATLGNGNKDG 666
Query: 311 LFSVLLRDYNSHAAASCKNRLAKLS 385
++SVLLRDYNSHAAASC NRLAK S
Sbjct: 667 IYSVLLRDYNSHAAASCMNRLAKFS 691
>ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [Amborella trichopoda]
gi|548832896|gb|ERM95665.1| hypothetical protein
AMTR_s00023p00196820 [Amborella trichopoda]
Length = 1383
Score = 210 bits (534), Expect = 2e-52
Identities = 101/129 (78%), Positives = 114/129 (88%), Gaps = 1/129 (0%)
Frame = +2
Query: 2 DTFYDRAAFSLMCCYMGDAMDHVDLPVPAIMKPVELWTGKQLFSVLVRPNAHTKAFVNLI 181
DTFYDRA FSLMC YMGD M+++DLP PA++KPVELWTGKQLFSVL+RP+AH K +VNL
Sbjct: 550 DTFYDRATFSLMCSYMGDGMENIDLPTPALLKPVELWTGKQLFSVLIRPHAHMKVYVNLS 609
Query: 182 VKEKIYTK-YETMCPSDGYVYFRNSELISGQVGKATLGNDNKDGLFSVLLRDYNSHAAAS 358
+ EK Y+K ETMC +DG+VY RNSELISGQ+GKATLGN NKDGLFSVLLRDYNSHAAAS
Sbjct: 610 LMEKNYSKGGETMCANDGFVYIRNSELISGQLGKATLGNGNKDGLFSVLLRDYNSHAAAS 669
Query: 359 CKNRLAKLS 385
C NRLAKLS
Sbjct: 670 CMNRLAKLS 678
>ref|XP_004169848.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
subunit rpc1-like, partial [Cucumis sativus]
Length = 693
Score = 209 bits (532), Expect = 3e-52
Identities = 103/135 (76%), Positives = 114/135 (84%), Gaps = 7/135 (5%)
Frame = +2
Query: 2 DTFYDRAAFSLMCCYMGDAMDHVDLPVPAIMKPVELWTGKQLFSVLVRPNAHTKAFVNLI 181
DTFYDRAAFSLMC YMGD MD VDLP PA++KP+ELWTGKQLFSVLVRP+A K ++NL
Sbjct: 248 DTFYDRAAFSLMCSYMGDGMDLVDLPTPALVKPIELWTGKQLFSVLVRPHASMKVYLNLT 307
Query: 182 VKEKIYTKY-------ETMCPSDGYVYFRNSELISGQVGKATLGNDNKDGLFSVLLRDYN 340
VKEK Y+K ETMCP+DG+VYFRNSELISGQVGKATLGN NKDGL+SVLLRDY
Sbjct: 308 VKEKSYSKVKGNEKERETMCPNDGFVYFRNSELISGQVGKATLGNGNKDGLYSVLLRDYK 367
Query: 341 SHAAASCKNRLAKLS 385
+HAAA C NRLAKLS
Sbjct: 368 AHAAAVCMNRLAKLS 382
>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Cucumis sativus]
Length = 1400
Score = 209 bits (532), Expect = 3e-52
Identities = 103/135 (76%), Positives = 114/135 (84%), Gaps = 7/135 (5%)
Frame = +2
Query: 2 DTFYDRAAFSLMCCYMGDAMDHVDLPVPAIMKPVELWTGKQLFSVLVRPNAHTKAFVNLI 181
DTFYDRAAFSLMC YMGD MD VDLP PA++KP+ELWTGKQLFSVLVRP+A K ++NL
Sbjct: 550 DTFYDRAAFSLMCSYMGDGMDLVDLPTPALVKPIELWTGKQLFSVLVRPHASMKVYLNLT 609
Query: 182 VKEKIYTKY-------ETMCPSDGYVYFRNSELISGQVGKATLGNDNKDGLFSVLLRDYN 340
VKEK Y+K ETMCP+DG+VYFRNSELISGQVGKATLGN NKDGL+SVLLRDY
Sbjct: 610 VKEKSYSKVKGNEKERETMCPNDGFVYFRNSELISGQVGKATLGNGNKDGLYSVLLRDYK 669
Query: 341 SHAAASCKNRLAKLS 385
+HAAA C NRLAKLS
Sbjct: 670 AHAAAVCMNRLAKLS 684
>ref|XP_002531828.1| DNA-directed RNA polymerase III largest subunit, putative [Ricinus
communis] gi|223528524|gb|EEF30548.1| DNA-directed RNA
polymerase III largest subunit, putative [Ricinus
communis]
Length = 1383
Score = 209 bits (532), Expect = 3e-52
Identities = 100/135 (74%), Positives = 115/135 (85%), Gaps = 8/135 (5%)
Frame = +2
Query: 2 DTFYDRAAFSLMCCYMGDAMDHVDLPVPAIMKPVELWTGKQLFSVLVRPNAHTKAFVNLI 181
DTFYDRAAFSLMC YM D MD +DLP PAI+KP+ELWTGKQLFSVL+RPNA+ + +VNLI
Sbjct: 528 DTFYDRAAFSLMCSYMNDGMDLIDLPTPAILKPIELWTGKQLFSVLLRPNANVRVYVNLI 587
Query: 182 VKEKIYTK--------YETMCPSDGYVYFRNSELISGQVGKATLGNDNKDGLFSVLLRDY 337
V+EKIY+K ETMCP+DG+VY RNSELISGQ+GKATLGN NKDGL+S+LLRDY
Sbjct: 588 VREKIYSKPKKGDKREKETMCPNDGFVYIRNSELISGQLGKATLGNGNKDGLYSILLRDY 647
Query: 338 NSHAAASCKNRLAKL 382
N HAAA+C NRLAKL
Sbjct: 648 NPHAAATCMNRLAKL 662
>gb|AAS79689.1| RNA polymerase III large subunit [Welwitschia mirabilis]
Length = 548
Score = 209 bits (531), Expect = 4e-52
Identities = 102/129 (79%), Positives = 115/129 (89%), Gaps = 1/129 (0%)
Frame = +2
Query: 2 DTFYDRAAFSLMCCYMGDAMDHVDLPVPAIMKPVELWTGKQLFSVLVRPNAHTKAFVNLI 181
DTFYDRAAFSLMC YMGDA + +DLP PAI+KP+ELWTGKQLFSVLVRPNA + FVNL+
Sbjct: 52 DTFYDRAAFSLMCSYMGDATESIDLPTPAILKPIELWTGKQLFSVLVRPNAKMRVFVNLM 111
Query: 182 VKEKIYTKY-ETMCPSDGYVYFRNSELISGQVGKATLGNDNKDGLFSVLLRDYNSHAAAS 358
V EK Y+K ETMCP+DG VYFRNSELISGQ+GKATLGN NK+GLF+VLLRDYN++AAAS
Sbjct: 112 VMEKNYSKSGETMCPNDGCVYFRNSELISGQLGKATLGNGNKNGLFTVLLRDYNAYAAAS 171
Query: 359 CKNRLAKLS 385
C NRLAKLS
Sbjct: 172 CMNRLAKLS 180
>gb|ACJ63311.1| RNA polymerase III large subunit [Papaver orientale]
Length = 554
Score = 207 bits (528), Expect = 9e-52
Identities = 100/129 (77%), Positives = 114/129 (88%), Gaps = 1/129 (0%)
Frame = +2
Query: 2 DTFYDRAAFSLMCCYMGDAMDHVDLPVPAIMKPVELWTGKQLFSVLVRPNAHTKAFVNLI 181
DTFYDRA+FSLMC YMGDAMD +DLP PA++KPVELWTGKQLF+VL+RP+A + FVNL
Sbjct: 50 DTFYDRASFSLMCSYMGDAMDAIDLPTPALIKPVELWTGKQLFNVLIRPHAQMRVFVNLT 109
Query: 182 VKEKIYTK-YETMCPSDGYVYFRNSELISGQVGKATLGNDNKDGLFSVLLRDYNSHAAAS 358
V EK Y K ET+CP+DG+VYFRNSELI GQ+GKATLGN NKDGLFSVLLRDY++HAAAS
Sbjct: 110 VFEKSYIKGRETLCPNDGFVYFRNSELICGQLGKATLGNGNKDGLFSVLLRDYDAHAAAS 169
Query: 359 CKNRLAKLS 385
C NRLAKLS
Sbjct: 170 CMNRLAKLS 178
>gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Morus notabilis]
Length = 1179
Score = 207 bits (527), Expect = 1e-51
Identities = 99/136 (72%), Positives = 116/136 (85%), Gaps = 8/136 (5%)
Frame = +2
Query: 2 DTFYDRAAFSLMCCYMGDAMDHVDLPVPAIMKPVELWTGKQLFSVLVRPNAHTKAFVNLI 181
DTFYDRAAFSLMC YMGDAM+H DLP PA++KPVELWTGKQLFSVLVRPNA+ + F+NL
Sbjct: 335 DTFYDRAAFSLMCSYMGDAMEHNDLPTPAVIKPVELWTGKQLFSVLVRPNANVRVFLNLT 394
Query: 182 VKEKIYT--------KYETMCPSDGYVYFRNSELISGQVGKATLGNDNKDGLFSVLLRDY 337
V+EK Y+ ++ETMCP+DG+V FRNSELISGQ+GK TLGN NKDGL+S+LLRDY
Sbjct: 395 VREKNYSNKLQENEREFETMCPADGFVCFRNSELISGQLGKGTLGNGNKDGLYSILLRDY 454
Query: 338 NSHAAASCKNRLAKLS 385
+HAAA+C NRLAKLS
Sbjct: 455 KAHAAAACMNRLAKLS 470
>gb|AAS79695.1| RNA polymerase III large subunit [Cycas revoluta]
Length = 548
Score = 207 bits (527), Expect = 1e-51
Identities = 99/129 (76%), Positives = 114/129 (88%), Gaps = 1/129 (0%)
Frame = +2
Query: 2 DTFYDRAAFSLMCCYMGDAMDHVDLPVPAIMKPVELWTGKQLFSVLVRPNAHTKAFVNLI 181
DTFYDRA F LMC YMGDA++ +DLP P I+KP+ELWTGKQLFSVLVRPNA+ + FVNL+
Sbjct: 52 DTFYDRATFCLMCSYMGDAVEPIDLPTPTILKPIELWTGKQLFSVLVRPNANVRVFVNLM 111
Query: 182 VKEKIYTK-YETMCPSDGYVYFRNSELISGQVGKATLGNDNKDGLFSVLLRDYNSHAAAS 358
+ EK Y+K ETMCP+DG+VYFRNSELISGQ+GKATLGN NKDGLF+VLLRDYN+HAAAS
Sbjct: 112 LAEKNYSKSRETMCPNDGFVYFRNSELISGQIGKATLGNGNKDGLFTVLLRDYNTHAAAS 171
Query: 359 CKNRLAKLS 385
NRLAKLS
Sbjct: 172 SMNRLAKLS 180
>ref|XP_003570766.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Brachypodium distachyon]
Length = 1400
Score = 207 bits (527), Expect = 1e-51
Identities = 99/140 (70%), Positives = 117/140 (83%), Gaps = 12/140 (8%)
Frame = +2
Query: 2 DTFYDRAAFSLMCCYMGDAMDHVDLPVPAIMKPVELWTGKQLFSVLVRPNAHTKAFVNLI 181
DTFYDR+ F+L+C Y+GDAM+++DLP PAI+KPVELWTGKQLFSVLVRPNA TK F+NL
Sbjct: 549 DTFYDRSYFTLLCSYLGDAMENIDLPTPAIIKPVELWTGKQLFSVLVRPNACTKVFLNLT 608
Query: 182 VKEKIYTKY------------ETMCPSDGYVYFRNSELISGQVGKATLGNDNKDGLFSVL 325
V+EK+Y K+ ETMCP+DG+VYFRNSEL+SGQ+GK TLGN NK+G+FSVL
Sbjct: 609 VEEKVYIKHKERDKKAITVLEETMCPNDGFVYFRNSELLSGQLGKKTLGNGNKEGMFSVL 668
Query: 326 LRDYNSHAAASCKNRLAKLS 385
LRDYNSHAAASC NRLAK S
Sbjct: 669 LRDYNSHAAASCMNRLAKFS 688
>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
Length = 1819
Score = 207 bits (527), Expect = 1e-51
Identities = 101/131 (77%), Positives = 114/131 (87%), Gaps = 3/131 (2%)
Frame = +2
Query: 2 DTFYDRAAFSLMCCYMGDAMDHVDLPVPAIMKPVELWTGKQLFSVLVRPNAHTKAFVNLI 181
DTFYDRAAFSLMC YMGD MD VDLP PAI+K +ELWTGKQLF+VL+RP+A+ + ++NL
Sbjct: 554 DTFYDRAAFSLMCSYMGDGMDLVDLPTPAIIKAMELWTGKQLFNVLLRPHANVRVYLNLT 613
Query: 182 VKEKIYTKY---ETMCPSDGYVYFRNSELISGQVGKATLGNDNKDGLFSVLLRDYNSHAA 352
V EK Y K ETMCPSDG+VYFRNSELISGQ+GKATLGN NKDGLFSVLLRDYN+HAA
Sbjct: 614 VMEKTYNKRRGKETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLFSVLLRDYNAHAA 673
Query: 353 ASCKNRLAKLS 385
A+C NRLAKLS
Sbjct: 674 AACMNRLAKLS 684