BLASTX nr result
ID: Zingiber23_contig00038424
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00038424
(1292 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006827835.1| hypothetical protein AMTR_s02071p00004290 [A... 244 4e-62
ref|XP_004154212.1| PREDICTED: 30S ribosomal protein S12-B, chlo... 220 1e-54
ref|XP_003599578.1| NAD(P)H-quinone oxidoreductase subunit 2 A [... 188 4e-45
ref|XP_004514805.1| PREDICTED: NAD(P)H-quinone oxidoreductase su... 184 7e-44
ref|YP_006503815.1| ribosomal protein S12 (chloroplast) [Datura ... 182 3e-43
ref|XP_004174176.1| PREDICTED: 30S ribosomal protein S12-B, chlo... 181 4e-43
gb|AEQ37137.1| ribosomal protein S12 (chloroplast) [Ginkgo bilob... 179 3e-42
sp|A4GYN8.1|RR12B_POPTR RecName: Full=30S ribosomal protein S12-... 176 1e-41
gb|ESW29186.1| hypothetical protein PHAVU_002G050200g, partial [... 175 3e-41
gb|EXC18469.1| 30S ribosomal protein S12-B [Morus notabilis] 171 6e-40
gb|EPS74518.1| hypothetical protein M569_00235, partial [Genlise... 171 8e-40
gb|AGQ50378.1| ribosomal protein S12 (chloroplast) [Rumex acetosa] 171 8e-40
ref|YP_004940490.1| rps12 gene product (chloroplast) [Boea hygro... 171 8e-40
ref|XP_006588013.1| PREDICTED: 30S ribosomal protein S12-B, chlo... 168 5e-39
ref|XP_003576003.1| PREDICTED: 30S ribosomal protein S12-B, chlo... 165 4e-38
ref|XP_003571809.1| PREDICTED: 30S ribosomal protein S12-B, chlo... 165 4e-38
ref|XP_003559318.1| PREDICTED: 30S ribosomal protein S12-B, chlo... 165 4e-38
ref|XP_003632904.1| PREDICTED: 30S ribosomal protein S12-B, chlo... 164 6e-38
ref|XP_003632903.1| PREDICTED: 30S ribosomal protein S12-B, chlo... 163 2e-37
gb|AGP51306.1| ribosomal protein S12 (chloroplast) [Triticum aes... 162 2e-37
>ref|XP_006827835.1| hypothetical protein AMTR_s02071p00004290 [Amborella trichopoda]
gi|548832465|gb|ERM95251.1| hypothetical protein
AMTR_s02071p00004290 [Amborella trichopoda]
Length = 140
Score = 244 bits (624), Expect = 4e-62
Identities = 129/146 (88%), Positives = 131/146 (89%)
Frame = +2
Query: 854 MESVRLEHENVTELVLVTLRYGVE*GRRFSNEEKDPIISKELNEEPYEVKTSCTVL*SDS 1033
MESV+LEHEN TELVLVT R GVE GRRFS+EEKDPI SKELNEEPYE SDS
Sbjct: 1 MESVQLEHENATELVLVTPRDGVEEGRRFSSEEKDPITSKELNEEPYE---------SDS 51
Query: 1034 KGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKD 1213
KGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHN QEHSVVLVRGGRVKD
Sbjct: 52 KGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHSVVLVRGGRVKD 111
Query: 1214 LPGVRYHIVRGTLDAVGVKDRQQGRS 1291
LPGVRYHIVRGTLDAVGVKDRQQGRS
Sbjct: 112 LPGVRYHIVRGTLDAVGVKDRQQGRS 137
>ref|XP_004154212.1| PREDICTED: 30S ribosomal protein S12-B, chloroplastic-like [Cucumis
sativus]
Length = 127
Score = 220 bits (560), Expect = 1e-54
Identities = 112/124 (90%), Positives = 116/124 (93%)
Frame = +2
Query: 920 VE*GRRFSNEEKDPIISKELNEEPYEVKTSCTVL*SDSKGDLSVNFSTITPKKPNSALRK 1099
+E GRRFSNEEKDP+ SKELNEEPYEV+ S TVL S KGDLSVNFSTITPKKPNSALRK
Sbjct: 1 MEEGRRFSNEEKDPMTSKELNEEPYEVQISRTVLSSGCKGDLSVNFSTITPKKPNSALRK 60
Query: 1100 VARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQ 1279
VARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPG+RYHIVRG LDAVGVKDRQ
Sbjct: 61 VARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGLRYHIVRGNLDAVGVKDRQ 120
Query: 1280 QGRS 1291
QGRS
Sbjct: 121 QGRS 124
>ref|XP_003599578.1| NAD(P)H-quinone oxidoreductase subunit 2 A [Medicago truncatula]
gi|355488626|gb|AES69829.1| NAD(P)H-quinone
oxidoreductase subunit 2 A [Medicago truncatula]
Length = 871
Score = 188 bits (478), Expect = 4e-45
Identities = 99/117 (84%), Positives = 100/117 (85%)
Frame = +2
Query: 935 RFSNEEKDPIISKELNEEPYEVKTSCTVL*SDSKGDLSVNFSTITPKKPNSALRKVARVR 1114
RFSNEEKDPI SKELNE+ K DLSVNFSTITPKKPNSALRKVARVR
Sbjct: 61 RFSNEEKDPITSKELNED---------------KDDLSVNFSTITPKKPNSALRKVARVR 105
Query: 1115 LTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQG 1285
LTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQG
Sbjct: 106 LTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQG 162
>ref|XP_004514805.1| PREDICTED: NAD(P)H-quinone oxidoreductase subunit 2 B,
chloroplastic-like [Cicer arietinum]
Length = 864
Score = 184 bits (467), Expect = 7e-44
Identities = 96/120 (80%), Positives = 101/120 (84%)
Frame = +2
Query: 932 RRFSNEEKDPIISKELNEEPYEVKTSCTVL*SDSKGDLSVNFSTITPKKPNSALRKVARV 1111
+ FSNE+KDP+ KELNE+ K DLSVNFSTITPKKPNSALRKVARV
Sbjct: 54 KEFSNEKKDPMTWKELNED---------------KDDLSVNFSTITPKKPNSALRKVARV 98
Query: 1112 RLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRS 1291
RLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGR+
Sbjct: 99 RLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRT 158
>ref|YP_006503815.1| ribosomal protein S12 (chloroplast) [Datura stramonium]
gi|350996572|gb|AEQ37083.1| ribosomal protein S12 [Datura
stramonium]
Length = 137
Score = 182 bits (461), Expect = 3e-43
Identities = 93/98 (94%), Positives = 93/98 (94%)
Frame = +2
Query: 998 VKTSCTVL*SDSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEH 1177
V SCTVL S SKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHN QEH
Sbjct: 37 VYISCTVLKSGSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEH 96
Query: 1178 SVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRS 1291
SVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRS
Sbjct: 97 SVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRS 134
>ref|XP_004174176.1| PREDICTED: 30S ribosomal protein S12-B, chloroplastic-like [Cucumis
sativus]
Length = 117
Score = 181 bits (460), Expect = 4e-43
Identities = 96/115 (83%), Positives = 101/115 (87%)
Frame = +2
Query: 875 HENVTELVLVTLRYGVE*GRRFSNEEKDPIISKELNEEPYEVKTSCTVL*SDSKGDLSVN 1054
+ENVTELV VTLR G+E GRRFSNEEKDP+ SKELNEEPYEVK S TVL S SKGDLSVN
Sbjct: 2 NENVTELVPVTLRDGMEEGRRFSNEEKDPMTSKELNEEPYEVKISRTVLSSGSKGDLSVN 61
Query: 1055 FSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLP 1219
FSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVV V G ++ P
Sbjct: 62 FSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVFVGGEGLRIYP 116
>gb|AEQ37137.1| ribosomal protein S12 (chloroplast) [Ginkgo biloba]
gi|350996664|gb|AEQ37174.1| ribosomal protein S12
(chloroplast) [Ginkgo biloba]
Length = 141
Score = 179 bits (453), Expect = 3e-42
Identities = 91/98 (92%), Positives = 92/98 (93%)
Frame = +2
Query: 998 VKTSCTVL*SDSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEH 1177
V SCTVL S KG+LSVNFST TPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEH
Sbjct: 37 VYISCTVLLSGGKGNLSVNFSTTTPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEH 96
Query: 1178 SVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRS 1291
SVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRS
Sbjct: 97 SVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRS 134
>sp|A4GYN8.1|RR12B_POPTR RecName: Full=30S ribosomal protein S12-B, chloroplastic
gi|133712086|gb|ABO36729.1| 30S ribosomal protein S12
[Populus trichocarpa]
Length = 135
Score = 176 bits (447), Expect = 1e-41
Identities = 89/95 (93%), Positives = 91/95 (95%)
Frame = +2
Query: 1007 SCTVL*SDSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVV 1186
+CT + S SKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHN QEHSVV
Sbjct: 33 TCTRVYSGSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHSVV 92
Query: 1187 LVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRS 1291
LVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRS
Sbjct: 93 LVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRS 127
>gb|ESW29186.1| hypothetical protein PHAVU_002G050200g, partial [Phaseolus vulgaris]
Length = 92
Score = 175 bits (444), Expect = 3e-41
Identities = 88/89 (98%), Positives = 88/89 (98%)
Frame = +2
Query: 1025 SDSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGR 1204
S SKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGR
Sbjct: 1 SGSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGR 60
Query: 1205 VKDLPGVRYHIVRGTLDAVGVKDRQQGRS 1291
VKDLPGVRYHIVRGTLDAVGVKDRQQGRS
Sbjct: 61 VKDLPGVRYHIVRGTLDAVGVKDRQQGRS 89
>gb|EXC18469.1| 30S ribosomal protein S12-B [Morus notabilis]
Length = 158
Score = 171 bits (433), Expect = 6e-40
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +2
Query: 1034 KGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKD 1213
+GDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKD
Sbjct: 17 QGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKD 76
Query: 1214 LPGVRYHIVRGTLDAVGVKDRQQGRS 1291
LPGVRYHIVRGTLDAVGVKDRQQGRS
Sbjct: 77 LPGVRYHIVRGTLDAVGVKDRQQGRS 102
>gb|EPS74518.1| hypothetical protein M569_00235, partial [Genlisea aurea]
Length = 92
Score = 171 bits (432), Expect = 8e-40
Identities = 86/89 (96%), Positives = 86/89 (96%)
Frame = +2
Query: 1025 SDSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGR 1204
S SKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHN QEHS VLVRGGR
Sbjct: 1 SGSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHSSVLVRGGR 60
Query: 1205 VKDLPGVRYHIVRGTLDAVGVKDRQQGRS 1291
VKDLPGVRYHIVRGTLDAVGVKDRQQGRS
Sbjct: 61 VKDLPGVRYHIVRGTLDAVGVKDRQQGRS 89
>gb|AGQ50378.1| ribosomal protein S12 (chloroplast) [Rumex acetosa]
Length = 89
Score = 171 bits (432), Expect = 8e-40
Identities = 85/85 (100%), Positives = 85/85 (100%)
Frame = +2
Query: 1037 GDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDL 1216
GDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDL
Sbjct: 2 GDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDL 61
Query: 1217 PGVRYHIVRGTLDAVGVKDRQQGRS 1291
PGVRYHIVRGTLDAVGVKDRQQGRS
Sbjct: 62 PGVRYHIVRGTLDAVGVKDRQQGRS 86
>ref|YP_004940490.1| rps12 gene product (chloroplast) [Boea hygrometrica]
gi|340549431|gb|AEK53253.1| ribosomal protein S12
(chloroplast) [Boea hygrometrica]
Length = 134
Score = 171 bits (432), Expect = 8e-40
Identities = 86/89 (96%), Positives = 86/89 (96%)
Frame = +2
Query: 1025 SDSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGR 1204
S SKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHN QEHS VLVRGGR
Sbjct: 43 SGSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHSSVLVRGGR 102
Query: 1205 VKDLPGVRYHIVRGTLDAVGVKDRQQGRS 1291
VKDLPGVRYHIVRGTLDAVGVKDRQQGRS
Sbjct: 103 VKDLPGVRYHIVRGTLDAVGVKDRQQGRS 131
>ref|XP_006588013.1| PREDICTED: 30S ribosomal protein S12-B, chloroplastic-like [Glycine
max]
Length = 169
Score = 168 bits (425), Expect = 5e-39
Identities = 85/89 (95%), Positives = 85/89 (95%)
Frame = +2
Query: 1025 SDSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGR 1204
S SKGDLSVNFSTITPKKPNSALRKVARVRLT GFEITAYIPGI HNLQEHSVVLVRGGR
Sbjct: 64 SGSKGDLSVNFSTITPKKPNSALRKVARVRLTFGFEITAYIPGIDHNLQEHSVVLVRGGR 123
Query: 1205 VKDLPGVRYHIVRGTLDAVGVKDRQQGRS 1291
VKDLPGV YHIVRGTLDAVGVKDRQQGRS
Sbjct: 124 VKDLPGVTYHIVRGTLDAVGVKDRQQGRS 152
>ref|XP_003576003.1| PREDICTED: 30S ribosomal protein S12-B, chloroplastic-like
[Brachypodium distachyon]
Length = 95
Score = 165 bits (417), Expect = 4e-38
Identities = 82/88 (93%), Positives = 85/88 (96%)
Frame = +2
Query: 1028 DSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRV 1207
DSKGDLSV+FSTI PKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRV
Sbjct: 5 DSKGDLSVDFSTINPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRV 64
Query: 1208 KDLPGVRYHIVRGTLDAVGVKDRQQGRS 1291
KDLPGVRY I+RGTLDAV VK+RQQGRS
Sbjct: 65 KDLPGVRYRIIRGTLDAVAVKNRQQGRS 92
>ref|XP_003571809.1| PREDICTED: 30S ribosomal protein S12-B, chloroplastic-like
[Brachypodium distachyon]
Length = 94
Score = 165 bits (417), Expect = 4e-38
Identities = 82/88 (93%), Positives = 85/88 (96%)
Frame = +2
Query: 1028 DSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRV 1207
DSKGDLSV+FSTI PKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRV
Sbjct: 4 DSKGDLSVDFSTINPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRV 63
Query: 1208 KDLPGVRYHIVRGTLDAVGVKDRQQGRS 1291
KDLPGVRY I+RGTLDAV VK+RQQGRS
Sbjct: 64 KDLPGVRYRIIRGTLDAVAVKNRQQGRS 91
>ref|XP_003559318.1| PREDICTED: 30S ribosomal protein S12-B, chloroplastic-like
[Brachypodium distachyon]
Length = 93
Score = 165 bits (417), Expect = 4e-38
Identities = 82/88 (93%), Positives = 85/88 (96%)
Frame = +2
Query: 1028 DSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRV 1207
DSKGDLSV+FSTI PKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRV
Sbjct: 3 DSKGDLSVDFSTINPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRV 62
Query: 1208 KDLPGVRYHIVRGTLDAVGVKDRQQGRS 1291
KDLPGVRY I+RGTLDAV VK+RQQGRS
Sbjct: 63 KDLPGVRYRIIRGTLDAVAVKNRQQGRS 90
>ref|XP_003632904.1| PREDICTED: 30S ribosomal protein S12-B, chloroplastic-like [Vitis
vinifera]
Length = 115
Score = 164 bits (416), Expect = 6e-38
Identities = 82/89 (92%), Positives = 83/89 (93%)
Frame = +2
Query: 1025 SDSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGR 1204
S SKGDLS+N STITPKKPNSALRKVARVRLTSGFEIT YIPGIGHN QEH VVLVRGGR
Sbjct: 24 SGSKGDLSINLSTITPKKPNSALRKVARVRLTSGFEITTYIPGIGHNSQEHFVVLVRGGR 83
Query: 1205 VKDLPGVRYHIVRGTLDAVGVKDRQQGRS 1291
VKDLPGVRYHIVRGTLDAVGVKD QQGRS
Sbjct: 84 VKDLPGVRYHIVRGTLDAVGVKDHQQGRS 112
>ref|XP_003632903.1| PREDICTED: 30S ribosomal protein S12-B, chloroplastic-like [Vitis
vinifera]
Length = 162
Score = 163 bits (412), Expect = 2e-37
Identities = 82/89 (92%), Positives = 82/89 (92%)
Frame = +2
Query: 1025 SDSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGR 1204
S SKGDLSVN STITPKKPNSALRKVARVRLTSGFEIT YIPGIGHN QEH VVLVRGGR
Sbjct: 71 SGSKGDLSVNLSTITPKKPNSALRKVARVRLTSGFEITTYIPGIGHNSQEHFVVLVRGGR 130
Query: 1205 VKDLPGVRYHIVRGTLDAVGVKDRQQGRS 1291
VKDLPGVRYHIVRGTLD VGVKD QQGRS
Sbjct: 131 VKDLPGVRYHIVRGTLDPVGVKDHQQGRS 159
>gb|AGP51306.1| ribosomal protein S12 (chloroplast) [Triticum aestivum]
Length = 133
Score = 162 bits (411), Expect = 2e-37
Identities = 81/87 (93%), Positives = 84/87 (96%)
Frame = +2
Query: 1031 SKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVK 1210
SKGDLSV+FSTI PKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVK
Sbjct: 44 SKGDLSVDFSTINPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVK 103
Query: 1211 DLPGVRYHIVRGTLDAVGVKDRQQGRS 1291
DLPGVRY I+RGTLDAV VK+RQQGRS
Sbjct: 104 DLPGVRYRIIRGTLDAVAVKNRQQGRS 130