BLASTX nr result
ID: Zingiber23_contig00038421
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00038421
(632 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004953401.1| PREDICTED: tRNA pseudouridine synthase A, mi... 271 1e-70
gb|EMT13214.1| tRNA pseudouridine synthase A [Aegilops tauschii] 268 1e-69
gb|EMS53855.1| tRNA pseudouridine synthase A, mitochondrial [Tri... 268 1e-69
ref|XP_002284797.2| PREDICTED: tRNA pseudouridine synthase A, mi... 268 1e-69
ref|XP_002454502.1| hypothetical protein SORBIDRAFT_04g032290 [S... 268 1e-69
emb|CAN69118.1| hypothetical protein VITISV_031845 [Vitis vinifera] 268 1e-69
ref|XP_003570061.1| PREDICTED: tRNA pseudouridine synthase A, mi... 267 2e-69
dbj|BAK04467.1| predicted protein [Hordeum vulgare subsp. vulgare] 267 2e-69
ref|NP_001047686.1| Os02g0668400 [Oryza sativa Japonica Group] g... 266 5e-69
gb|EEC73751.1| hypothetical protein OsI_08404 [Oryza sativa Indi... 266 5e-69
gb|EAZ24127.1| hypothetical protein OsJ_07867 [Oryza sativa Japo... 266 5e-69
ref|XP_002300673.2| hypothetical protein POPTR_0002s01580g [Popu... 265 8e-69
gb|AFW72724.1| hypothetical protein ZEAMMB73_421497 [Zea mays] 265 8e-69
gb|ACN28181.1| unknown [Zea mays] gi|413938174|gb|AFW72725.1| tR... 265 8e-69
gb|EOY18823.1| Pseudouridine synthase [Theobroma cacao] 264 2e-68
ref|NP_001150144.1| LOC100283773 [Zea mays] gi|195637102|gb|ACG3... 264 2e-68
emb|CBI18897.3| unnamed protein product [Vitis vinifera] 263 2e-68
ref|XP_004157082.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudou... 263 3e-68
ref|XP_004145528.1| PREDICTED: tRNA pseudouridine synthase A, mi... 263 3e-68
ref|XP_006435279.1| hypothetical protein CICLE_v10000838mg [Citr... 261 2e-67
>ref|XP_004953401.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
[Setaria italica]
Length = 538
Score = 271 bits (692), Expect = 1e-70
Identities = 129/196 (65%), Positives = 158/196 (80%), Gaps = 2/196 (1%)
Frame = +3
Query: 51 GNPSNRDSFLEERSTMQTVVHDESN--EQLTAKTKFCYDDEQKARFNQILQHYVGTHNFH 224
GN N+ +Q + + SN E+ K+ F Y+DE K RFN+IL++YVGTHNFH
Sbjct: 281 GNEENKLEATATEEKVQGMDFENSNGEEKPPTKSDFSYNDEMKERFNRILKYYVGTHNFH 340
Query: 225 NLTTRIKPEDPSARRYIISFNANSVVCIDGIEFVKCEVVGQSFMLHQIRKMIGLAVAVMR 404
N TTR K EDP+A+R+IISF A+ VV +DGI+FV+CEVVGQSFMLHQIRKMIGLAVAVMR
Sbjct: 341 NFTTRTKAEDPAAKRFIISFAADRVVSLDGIDFVRCEVVGQSFMLHQIRKMIGLAVAVMR 400
Query: 405 NCAPESLMDVALRKDVRINVPTAPEVGLFLDECQFTSYNNQWKDSHEPLTMDAYAEEAED 584
NCAPES+ DVA RKDV++NVPTAPEVGL+LDEC FTSYN +WKDSHE ++M+ Y EEAE+
Sbjct: 401 NCAPESIYDVAFRKDVKLNVPTAPEVGLYLDECMFTSYNKKWKDSHEAVSMEPYCEEAEE 460
Query: 585 FKMKYIYPHTASMEHK 632
FK+KYI+PH A+MEHK
Sbjct: 461 FKVKYIFPHIAAMEHK 476
>gb|EMT13214.1| tRNA pseudouridine synthase A [Aegilops tauschii]
Length = 585
Score = 268 bits (685), Expect = 1e-69
Identities = 128/201 (63%), Positives = 155/201 (77%)
Frame = +3
Query: 30 ASNVDECGNPSNRDSFLEERSTMQTVVHDESNEQLTAKTKFCYDDEQKARFNQILQHYVG 209
AS V E N +ER + + E K F Y DE K +FN+IL+HYVG
Sbjct: 318 ASVVAEKENNFEPADIEKERMQATNIQKENGEESPLLKNTFAYTDEVKEKFNRILKHYVG 377
Query: 210 THNFHNLTTRIKPEDPSARRYIISFNANSVVCIDGIEFVKCEVVGQSFMLHQIRKMIGLA 389
T NFHN TTR K EDP+A+RYIISF AN+VV +DGI+FV+CEVVGQSFMLHQIRKM+GLA
Sbjct: 378 TRNFHNFTTRTKAEDPAAKRYIISFTANTVVSLDGIDFVRCEVVGQSFMLHQIRKMVGLA 437
Query: 390 VAVMRNCAPESLMDVALRKDVRINVPTAPEVGLFLDECQFTSYNNQWKDSHEPLTMDAYA 569
VAVMRNCAPES+ DVA RKD+R+NVPTAPEVGL LDEC FTSYN++W D+HE ++++ YA
Sbjct: 438 VAVMRNCAPESIYDVAFRKDIRLNVPTAPEVGLHLDECMFTSYNSKWMDTHEAVSIEPYA 497
Query: 570 EEAEDFKMKYIYPHTASMEHK 632
EEAE+FK+KYI+PH A+MEHK
Sbjct: 498 EEAEEFKIKYIFPHIAAMEHK 518
>gb|EMS53855.1| tRNA pseudouridine synthase A, mitochondrial [Triticum urartu]
Length = 575
Score = 268 bits (684), Expect = 1e-69
Identities = 126/185 (68%), Positives = 152/185 (82%), Gaps = 2/185 (1%)
Frame = +3
Query: 84 ERSTMQTVVHDESN--EQLTAKTKFCYDDEQKARFNQILQHYVGTHNFHNLTTRIKPEDP 257
E+ MQ + + N E K F Y DE K +FN+IL+HYVGT NFHN TTR K EDP
Sbjct: 341 EKERMQAINIQKENGEESPLLKNTFAYTDEVKEKFNRILKHYVGTRNFHNFTTRTKAEDP 400
Query: 258 SARRYIISFNANSVVCIDGIEFVKCEVVGQSFMLHQIRKMIGLAVAVMRNCAPESLMDVA 437
+A+RYIISF ANSVV +DGI+FV+CEVVGQSFMLHQIRKM+GLAVAVMRNCAPES+ DVA
Sbjct: 401 AAKRYIISFTANSVVSLDGIDFVRCEVVGQSFMLHQIRKMVGLAVAVMRNCAPESIYDVA 460
Query: 438 LRKDVRINVPTAPEVGLFLDECQFTSYNNQWKDSHEPLTMDAYAEEAEDFKMKYIYPHTA 617
RKD+R+NVPTAPEVGL LDEC FTSYN++W D+HE ++++ YAEEAE+FK+KYI+PH A
Sbjct: 461 FRKDIRLNVPTAPEVGLHLDECMFTSYNSKWMDTHEAVSIEPYAEEAEEFKIKYIFPHIA 520
Query: 618 SMEHK 632
+MEHK
Sbjct: 521 AMEHK 525
>ref|XP_002284797.2| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Vitis
vinifera]
Length = 503
Score = 268 bits (684), Expect = 1e-69
Identities = 127/206 (61%), Positives = 157/206 (76%)
Frame = +3
Query: 15 EGELRASNVDECGNPSNRDSFLEERSTMQTVVHDESNEQLTAKTKFCYDDEQKARFNQIL 194
EG N P +R S E + D+ +L + FCY D+++ RFN+IL
Sbjct: 258 EGRCFQDNETSESTPDSRASAQNEPGVSHSEQSDKGENKLEKGSGFCYGDKERERFNRIL 317
Query: 195 QHYVGTHNFHNLTTRIKPEDPSARRYIISFNANSVVCIDGIEFVKCEVVGQSFMLHQIRK 374
HYVGTHNFHN TTRIK EDPSA+R+I+SF+ N++V ++GIEFVKCEVVGQSFMLHQIRK
Sbjct: 318 GHYVGTHNFHNFTTRIKAEDPSAQRFIVSFDGNTIVTVEGIEFVKCEVVGQSFMLHQIRK 377
Query: 375 MIGLAVAVMRNCAPESLMDVALRKDVRINVPTAPEVGLFLDECQFTSYNNQWKDSHEPLT 554
MIGLAVA+MRN APESL++ AL KDV INVPTAPEVGL+LDEC F+SYN +W+DSHE ++
Sbjct: 378 MIGLAVAIMRNVAPESLLETALLKDVNINVPTAPEVGLYLDECFFSSYNKKWRDSHEEVS 437
Query: 555 MDAYAEEAEDFKMKYIYPHTASMEHK 632
M AYAEEAE+FKMK++Y H A+ EHK
Sbjct: 438 MKAYAEEAEEFKMKHVYSHIAATEHK 463
>ref|XP_002454502.1| hypothetical protein SORBIDRAFT_04g032290 [Sorghum bicolor]
gi|241934333|gb|EES07478.1| hypothetical protein
SORBIDRAFT_04g032290 [Sorghum bicolor]
Length = 567
Score = 268 bits (684), Expect = 1e-69
Identities = 125/184 (67%), Positives = 151/184 (82%)
Frame = +3
Query: 81 EERSTMQTVVHDESNEQLTAKTKFCYDDEQKARFNQILQHYVGTHNFHNLTTRIKPEDPS 260
EE++ E+L K+ F Y DE K RFN+IL++YVGTHNFHN TTR K EDP+
Sbjct: 321 EEKAQGMDSEKSNGEEKLPTKSAFSYTDEVKERFNRILKYYVGTHNFHNFTTRTKAEDPA 380
Query: 261 ARRYIISFNANSVVCIDGIEFVKCEVVGQSFMLHQIRKMIGLAVAVMRNCAPESLMDVAL 440
A+R+IISF A+ VV +DGI+FV+CEVVGQSFMLHQIRKMIGLAVAVMRNCAPE++ DVA
Sbjct: 381 AKRFIISFGADRVVSLDGIDFVRCEVVGQSFMLHQIRKMIGLAVAVMRNCAPETIYDVAF 440
Query: 441 RKDVRINVPTAPEVGLFLDECQFTSYNNQWKDSHEPLTMDAYAEEAEDFKMKYIYPHTAS 620
RKDV +NVPTAPEVGL+LDEC FTSYN +WKDSHE ++M+ Y EEAE+FK+KYI+PH A+
Sbjct: 441 RKDVNLNVPTAPEVGLYLDECMFTSYNKKWKDSHEAVSMEPYYEEAEEFKVKYIFPHIAA 500
Query: 621 MEHK 632
MEHK
Sbjct: 501 MEHK 504
>emb|CAN69118.1| hypothetical protein VITISV_031845 [Vitis vinifera]
Length = 559
Score = 268 bits (684), Expect = 1e-69
Identities = 127/206 (61%), Positives = 157/206 (76%)
Frame = +3
Query: 15 EGELRASNVDECGNPSNRDSFLEERSTMQTVVHDESNEQLTAKTKFCYDDEQKARFNQIL 194
EG N P +R S E + D+ +L + FCY D+++ RFN+IL
Sbjct: 314 EGRCFQDNETSESTPDSRASAQNEPGVSHSEQSDKGENKLEKGSGFCYGDKERERFNRIL 373
Query: 195 QHYVGTHNFHNLTTRIKPEDPSARRYIISFNANSVVCIDGIEFVKCEVVGQSFMLHQIRK 374
HYVGTHNFHN TTRIK EDPSA+R+I+SF+ N++V ++GIEFVKCEVVGQSFMLHQIRK
Sbjct: 374 GHYVGTHNFHNFTTRIKAEDPSAQRFIVSFDGNTIVTVEGIEFVKCEVVGQSFMLHQIRK 433
Query: 375 MIGLAVAVMRNCAPESLMDVALRKDVRINVPTAPEVGLFLDECQFTSYNNQWKDSHEPLT 554
MIGLAVA+MRN APESL++ AL KDV INVPTAPEVGL+LDEC F+SYN +W+DSHE ++
Sbjct: 434 MIGLAVAIMRNVAPESLLETALLKDVNINVPTAPEVGLYLDECFFSSYNKKWRDSHEEVS 493
Query: 555 MDAYAEEAEDFKMKYIYPHTASMEHK 632
M AYAEEAE+FKMK++Y H A+ EHK
Sbjct: 494 MKAYAEEAEEFKMKHVYSHIAATEHK 519
>ref|XP_003570061.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
[Brachypodium distachyon]
Length = 553
Score = 267 bits (683), Expect = 2e-69
Identities = 123/184 (66%), Positives = 151/184 (82%)
Frame = +3
Query: 81 EERSTMQTVVHDESNEQLTAKTKFCYDDEQKARFNQILQHYVGTHNFHNLTTRIKPEDPS 260
EE+ + + + E K F Y DE K +FN+IL++YVGTHNFHN TTR K EDP+
Sbjct: 320 EEKMEVMDIQKNNGEESPLTKNTFAYTDEVKEKFNRILKYYVGTHNFHNFTTRTKAEDPA 379
Query: 261 ARRYIISFNANSVVCIDGIEFVKCEVVGQSFMLHQIRKMIGLAVAVMRNCAPESLMDVAL 440
A+R+IISF AN VV +DGI+FV+CEVVGQSFMLHQIRKM+GLAVAVMRNCAPES+ DVA
Sbjct: 380 AKRFIISFTANRVVRLDGIDFVRCEVVGQSFMLHQIRKMVGLAVAVMRNCAPESIYDVAF 439
Query: 441 RKDVRINVPTAPEVGLFLDECQFTSYNNQWKDSHEPLTMDAYAEEAEDFKMKYIYPHTAS 620
RKD+R+NVPTAPEVGL LDEC FTSYN +WKD+HE ++++ YAEEAE+FK+KYI+PH A+
Sbjct: 440 RKDIRLNVPTAPEVGLHLDECMFTSYNAKWKDTHEAVSIEPYAEEAEEFKVKYIFPHIAA 499
Query: 621 MEHK 632
MEHK
Sbjct: 500 MEHK 503
>dbj|BAK04467.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 572
Score = 267 bits (682), Expect = 2e-69
Identities = 128/201 (63%), Positives = 154/201 (76%)
Frame = +3
Query: 30 ASNVDECGNPSNRDSFLEERSTMQTVVHDESNEQLTAKTKFCYDDEQKARFNQILQHYVG 209
AS V E GN +ER + + K F Y DE K +FN+IL+HYVG
Sbjct: 322 ASVVAEKGNNFEPADSEKERMQATNIQKENGEGSPLLKNTFAYTDEVKEKFNRILKHYVG 381
Query: 210 THNFHNLTTRIKPEDPSARRYIISFNANSVVCIDGIEFVKCEVVGQSFMLHQIRKMIGLA 389
T NFHN TTR K EDP+A+RYIISF ANSVV +DGI+FV+CEVVGQSFMLHQIRKM+GLA
Sbjct: 382 TRNFHNFTTRTKAEDPAAKRYIISFTANSVVSLDGIDFVRCEVVGQSFMLHQIRKMVGLA 441
Query: 390 VAVMRNCAPESLMDVALRKDVRINVPTAPEVGLFLDECQFTSYNNQWKDSHEPLTMDAYA 569
VAVMRNCAPES+ DVA RKD+R+NVPTAPEVGL LDEC F SYN++W D+HE ++++ YA
Sbjct: 442 VAVMRNCAPESIYDVAFRKDIRLNVPTAPEVGLHLDECMFASYNSKWMDTHEAVSIEPYA 501
Query: 570 EEAEDFKMKYIYPHTASMEHK 632
EEAE+FK+KYI+PH A+MEHK
Sbjct: 502 EEAEEFKIKYIFPHIAAMEHK 522
>ref|NP_001047686.1| Os02g0668400 [Oryza sativa Japonica Group]
gi|50251324|dbj|BAD28300.1| putative pseudouridine
synthase 1 [Oryza sativa Japonica Group]
gi|50252138|dbj|BAD28134.1| putative pseudouridine
synthase 1 [Oryza sativa Japonica Group]
gi|113537217|dbj|BAF09600.1| Os02g0668400 [Oryza sativa
Japonica Group]
Length = 581
Score = 266 bits (679), Expect = 5e-69
Identities = 126/198 (63%), Positives = 153/198 (77%)
Frame = +3
Query: 39 VDECGNPSNRDSFLEERSTMQTVVHDESNEQLTAKTKFCYDDEQKARFNQILQHYVGTHN 218
V E G D E+ S E++ ++ F Y E K RFN+IL+ YVGTHN
Sbjct: 334 VTEDGKKQAMDVVTEDEKKQDVDYEGSSLEEMPLRSAFSYTHEVKERFNRILKKYVGTHN 393
Query: 219 FHNLTTRIKPEDPSARRYIISFNANSVVCIDGIEFVKCEVVGQSFMLHQIRKMIGLAVAV 398
FHN TTR K EDP+A+R+IISF A+ VV +DGI+F++CEVVGQSFMLHQIRKMIGLAVAV
Sbjct: 394 FHNFTTRTKAEDPAAKRFIISFAADRVVNLDGIDFIRCEVVGQSFMLHQIRKMIGLAVAV 453
Query: 399 MRNCAPESLMDVALRKDVRINVPTAPEVGLFLDECQFTSYNNQWKDSHEPLTMDAYAEEA 578
MRNCAPES+ DVA RKDV +NVPTAPEVGL+LDEC FTSYN +WKDSHE ++M+ Y+EEA
Sbjct: 454 MRNCAPESIYDVAFRKDVNLNVPTAPEVGLYLDECMFTSYNKKWKDSHEAVSMEPYSEEA 513
Query: 579 EDFKMKYIYPHTASMEHK 632
E+FK+KYI+PH A+MEHK
Sbjct: 514 EEFKLKYIFPHIAAMEHK 531
>gb|EEC73751.1| hypothetical protein OsI_08404 [Oryza sativa Indica Group]
Length = 581
Score = 266 bits (679), Expect = 5e-69
Identities = 126/198 (63%), Positives = 153/198 (77%)
Frame = +3
Query: 39 VDECGNPSNRDSFLEERSTMQTVVHDESNEQLTAKTKFCYDDEQKARFNQILQHYVGTHN 218
V E G D E+ S E++ ++ F Y E K RFN+IL+ YVGTHN
Sbjct: 334 VTEDGKKQAMDVVTEDEKKQDVDYEGSSLEEMPLRSAFSYTHEVKERFNRILKKYVGTHN 393
Query: 219 FHNLTTRIKPEDPSARRYIISFNANSVVCIDGIEFVKCEVVGQSFMLHQIRKMIGLAVAV 398
FHN TTR K EDP+A+R+IISF A+ VV +DGI+F++CEVVGQSFMLHQIRKMIGLAVAV
Sbjct: 394 FHNFTTRTKAEDPAAKRFIISFAADRVVNLDGIDFIRCEVVGQSFMLHQIRKMIGLAVAV 453
Query: 399 MRNCAPESLMDVALRKDVRINVPTAPEVGLFLDECQFTSYNNQWKDSHEPLTMDAYAEEA 578
MRNCAPES+ DVA RKDV +NVPTAPEVGL+LDEC FTSYN +WKDSHE ++M+ Y+EEA
Sbjct: 454 MRNCAPESIYDVAFRKDVNLNVPTAPEVGLYLDECMFTSYNKKWKDSHEAVSMEPYSEEA 513
Query: 579 EDFKMKYIYPHTASMEHK 632
E+FK+KYI+PH A+MEHK
Sbjct: 514 EEFKLKYIFPHIAAMEHK 531
>gb|EAZ24127.1| hypothetical protein OsJ_07867 [Oryza sativa Japonica Group]
Length = 518
Score = 266 bits (679), Expect = 5e-69
Identities = 126/198 (63%), Positives = 153/198 (77%)
Frame = +3
Query: 39 VDECGNPSNRDSFLEERSTMQTVVHDESNEQLTAKTKFCYDDEQKARFNQILQHYVGTHN 218
V E G D E+ S E++ ++ F Y E K RFN+IL+ YVGTHN
Sbjct: 271 VTEDGKKQAMDVVTEDEKKQDVDYEGSSLEEMPLRSAFSYTHEVKERFNRILKKYVGTHN 330
Query: 219 FHNLTTRIKPEDPSARRYIISFNANSVVCIDGIEFVKCEVVGQSFMLHQIRKMIGLAVAV 398
FHN TTR K EDP+A+R+IISF A+ VV +DGI+F++CEVVGQSFMLHQIRKMIGLAVAV
Sbjct: 331 FHNFTTRTKAEDPAAKRFIISFAADRVVNLDGIDFIRCEVVGQSFMLHQIRKMIGLAVAV 390
Query: 399 MRNCAPESLMDVALRKDVRINVPTAPEVGLFLDECQFTSYNNQWKDSHEPLTMDAYAEEA 578
MRNCAPES+ DVA RKDV +NVPTAPEVGL+LDEC FTSYN +WKDSHE ++M+ Y+EEA
Sbjct: 391 MRNCAPESIYDVAFRKDVNLNVPTAPEVGLYLDECMFTSYNKKWKDSHEAVSMEPYSEEA 450
Query: 579 EDFKMKYIYPHTASMEHK 632
E+FK+KYI+PH A+MEHK
Sbjct: 451 EEFKLKYIFPHIAAMEHK 468
>ref|XP_002300673.2| hypothetical protein POPTR_0002s01580g [Populus trichocarpa]
gi|550344062|gb|EEE79946.2| hypothetical protein
POPTR_0002s01580g [Populus trichocarpa]
Length = 516
Score = 265 bits (677), Expect = 8e-69
Identities = 129/213 (60%), Positives = 162/213 (76%), Gaps = 3/213 (1%)
Frame = +3
Query: 3 SISMEGELRASNVDECGNPSNRDSFL---EERSTMQTVVHDESNEQLTAKTKFCYDDEQK 173
S+ E + +++ D NP ++D + E +T +S E++ + FCY +++K
Sbjct: 257 SVMPESVISSNSEDANVNPESKDEIIVSVENGDDEKT----KSKEEMVKGSSFCYGEKEK 312
Query: 174 ARFNQILQHYVGTHNFHNLTTRIKPEDPSARRYIISFNANSVVCIDGIEFVKCEVVGQSF 353
RFN+IL +YVG+HNFHN TTR K EDPSARRYI+SF A + V ++GIEFVKCEVVGQSF
Sbjct: 313 ERFNRILGYYVGSHNFHNFTTRTKAEDPSARRYIVSFEAKTTVNVEGIEFVKCEVVGQSF 372
Query: 354 MLHQIRKMIGLAVAVMRNCAPESLMDVALRKDVRINVPTAPEVGLFLDECQFTSYNNQWK 533
MLHQIRKMIG+AVA+MRNCAPESL+ AL+KDV INVPTAPEVGL+LDEC FTSYN +WK
Sbjct: 373 MLHQIRKMIGVAVAIMRNCAPESLIQTALQKDVNINVPTAPEVGLYLDECFFTSYNQKWK 432
Query: 534 DSHEPLTMDAYAEEAEDFKMKYIYPHTASMEHK 632
DSHE ++M Y EEAEDFKMK+IY H A+ EHK
Sbjct: 433 DSHEEISMKDYEEEAEDFKMKHIYSHIATTEHK 465
>gb|AFW72724.1| hypothetical protein ZEAMMB73_421497 [Zea mays]
Length = 565
Score = 265 bits (677), Expect = 8e-69
Identities = 128/195 (65%), Positives = 155/195 (79%), Gaps = 5/195 (2%)
Frame = +3
Query: 63 NRDSFLEERSTMQTVVHDESN-----EQLTAKTKFCYDDEQKARFNQILQHYVGTHNFHN 227
N + LE +T ES E+L K+ F Y DE K RFN+IL++Y+GTHNFHN
Sbjct: 308 NEEKKLEPAATENKAQGMESEKINGEEKLPTKSTFSYTDEVKERFNRILKYYIGTHNFHN 367
Query: 228 LTTRIKPEDPSARRYIISFNANSVVCIDGIEFVKCEVVGQSFMLHQIRKMIGLAVAVMRN 407
TTR K EDP+A+R+IISF A+ VV +DGI+FV+CEVVGQSFMLHQIRKMIGLAVAVMRN
Sbjct: 368 FTTRTKAEDPAAKRFIISFAADRVVSLDGIDFVRCEVVGQSFMLHQIRKMIGLAVAVMRN 427
Query: 408 CAPESLMDVALRKDVRINVPTAPEVGLFLDECQFTSYNNQWKDSHEPLTMDAYAEEAEDF 587
CAPES+ DVA RKDV +NVPTAPEVGL+LDEC FTSYN +WKDSHE ++M+ Y+EEAE+F
Sbjct: 428 CAPESIYDVAFRKDVNLNVPTAPEVGLYLDECMFTSYNKKWKDSHEAVSMEPYSEEAEEF 487
Query: 588 KMKYIYPHTASMEHK 632
K+KYI+ H A+MEHK
Sbjct: 488 KVKYIFTHIAAMEHK 502
>gb|ACN28181.1| unknown [Zea mays] gi|413938174|gb|AFW72725.1| tRNA pseudouridine
synthase family protein [Zea mays]
Length = 562
Score = 265 bits (677), Expect = 8e-69
Identities = 128/195 (65%), Positives = 155/195 (79%), Gaps = 5/195 (2%)
Frame = +3
Query: 63 NRDSFLEERSTMQTVVHDESN-----EQLTAKTKFCYDDEQKARFNQILQHYVGTHNFHN 227
N + LE +T ES E+L K+ F Y DE K RFN+IL++Y+GTHNFHN
Sbjct: 305 NEEKKLEPAATENKAQGMESEKINGEEKLPTKSTFSYTDEVKERFNRILKYYIGTHNFHN 364
Query: 228 LTTRIKPEDPSARRYIISFNANSVVCIDGIEFVKCEVVGQSFMLHQIRKMIGLAVAVMRN 407
TTR K EDP+A+R+IISF A+ VV +DGI+FV+CEVVGQSFMLHQIRKMIGLAVAVMRN
Sbjct: 365 FTTRTKAEDPAAKRFIISFAADRVVSLDGIDFVRCEVVGQSFMLHQIRKMIGLAVAVMRN 424
Query: 408 CAPESLMDVALRKDVRINVPTAPEVGLFLDECQFTSYNNQWKDSHEPLTMDAYAEEAEDF 587
CAPES+ DVA RKDV +NVPTAPEVGL+LDEC FTSYN +WKDSHE ++M+ Y+EEAE+F
Sbjct: 425 CAPESIYDVAFRKDVNLNVPTAPEVGLYLDECMFTSYNKKWKDSHEAVSMEPYSEEAEEF 484
Query: 588 KMKYIYPHTASMEHK 632
K+KYI+ H A+MEHK
Sbjct: 485 KVKYIFTHIAAMEHK 499
>gb|EOY18823.1| Pseudouridine synthase [Theobroma cacao]
Length = 507
Score = 264 bits (674), Expect = 2e-68
Identities = 137/210 (65%), Positives = 165/210 (78%), Gaps = 9/210 (4%)
Frame = +3
Query: 30 ASNVDECGN---PSNRDSFLEE--RSTMQ---TVVHDESNEQLTAKTK-FCYDDEQKARF 182
+SN E GN N S LEE S++Q T V + E++ + + FCY +E+K F
Sbjct: 237 SSNNGESGNVIKEHNLTSELEEVTDSSVQNEFTEVDKVNVEKIPLEERRFCYGEEEKGLF 296
Query: 183 NQILQHYVGTHNFHNLTTRIKPEDPSARRYIISFNANSVVCIDGIEFVKCEVVGQSFMLH 362
N+IL+HYVG+HNFHN TTR K EDPSARRYI+SF+AN+VV ++GI+FVKCEVVGQSFMLH
Sbjct: 297 NRILKHYVGSHNFHNFTTRTKAEDPSARRYIVSFHANTVVNVEGIDFVKCEVVGQSFMLH 356
Query: 363 QIRKMIGLAVAVMRNCAPESLMDVALRKDVRINVPTAPEVGLFLDECQFTSYNNQWKDSH 542
QIRKMIG+AVAVMRNCAPESL++ ALRKDV INVPTAPEVGL+LDEC F SYN +WKDSH
Sbjct: 357 QIRKMIGMAVAVMRNCAPESLIETALRKDVSINVPTAPEVGLYLDECLFASYNQKWKDSH 416
Query: 543 EPLTMDAYAEEAEDFKMKYIYPHTASMEHK 632
E L+M AY EEAE+FKMK+IY H AS E +
Sbjct: 417 EELSMKAYEEEAEEFKMKFIYSHIASTERE 446
>ref|NP_001150144.1| LOC100283773 [Zea mays] gi|195637102|gb|ACG38019.1| tRNA
pseudouridine synthase family protein [Zea mays]
Length = 561
Score = 264 bits (674), Expect = 2e-68
Identities = 125/180 (69%), Positives = 152/180 (84%), Gaps = 2/180 (1%)
Frame = +3
Query: 99 QTVVHDESN--EQLTAKTKFCYDDEQKARFNQILQHYVGTHNFHNLTTRIKPEDPSARRY 272
Q + ++SN E+L KT F Y DE K RFN+IL++Y+GTHNFHN TTR K EDP+A+R+
Sbjct: 319 QGMESEKSNGEEKLPTKTTFSYTDEVKERFNRILKYYIGTHNFHNFTTRTKAEDPAAKRF 378
Query: 273 IISFNANSVVCIDGIEFVKCEVVGQSFMLHQIRKMIGLAVAVMRNCAPESLMDVALRKDV 452
IISF A+ VV +DGI+FV+CEVVGQSFMLHQIRKMIGLAVAV+RNCAPES+ DVA RKDV
Sbjct: 379 IISFAADRVVSLDGIDFVRCEVVGQSFMLHQIRKMIGLAVAVIRNCAPESIYDVAFRKDV 438
Query: 453 RINVPTAPEVGLFLDECQFTSYNNQWKDSHEPLTMDAYAEEAEDFKMKYIYPHTASMEHK 632
+NVPTAPEVGL+LDEC FTSYN +WKDSHE + M+ Y+EEAE+FK+KYI+ H A+MEHK
Sbjct: 439 NLNVPTAPEVGLYLDECMFTSYNKKWKDSHEAVFMEPYSEEAEEFKVKYIFTHIAAMEHK 498
>emb|CBI18897.3| unnamed protein product [Vitis vinifera]
Length = 419
Score = 263 bits (673), Expect = 2e-68
Identities = 126/200 (63%), Positives = 160/200 (80%)
Frame = +3
Query: 33 SNVDECGNPSNRDSFLEERSTMQTVVHDESNEQLTAKTKFCYDDEQKARFNQILQHYVGT 212
+N+D N S ++ EE + + + E +L + FCY D+++ RFN+IL HYVGT
Sbjct: 186 NNID--ANNSISETIKEEAAKLSS----EGENKLEKGSGFCYGDKERERFNRILGHYVGT 239
Query: 213 HNFHNLTTRIKPEDPSARRYIISFNANSVVCIDGIEFVKCEVVGQSFMLHQIRKMIGLAV 392
HNFHN TTRIK EDPSA+R+I+SF+ N++V ++GIEFVKCEVVGQSFMLHQIRKMIGLAV
Sbjct: 240 HNFHNFTTRIKAEDPSAQRFIVSFDGNTIVTVEGIEFVKCEVVGQSFMLHQIRKMIGLAV 299
Query: 393 AVMRNCAPESLMDVALRKDVRINVPTAPEVGLFLDECQFTSYNNQWKDSHEPLTMDAYAE 572
A+MRN APESL++ AL KDV INVPTAPEVGL+LDEC F+SYN +W+DSHE ++M AYAE
Sbjct: 300 AIMRNVAPESLLETALLKDVNINVPTAPEVGLYLDECFFSSYNKKWRDSHEEVSMKAYAE 359
Query: 573 EAEDFKMKYIYPHTASMEHK 632
EAE+FKMK++Y H A+ EHK
Sbjct: 360 EAEEFKMKHVYSHIAATEHK 379
>ref|XP_004157082.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudouridine synthase A,
mitochondrial-like [Cucumis sativus]
Length = 519
Score = 263 bits (672), Expect = 3e-68
Identities = 132/212 (62%), Positives = 162/212 (76%), Gaps = 2/212 (0%)
Frame = +3
Query: 3 SISMEGELRASNVDECGNPSNRDSFLEER-STMQTVVHDES-NEQLTAKTKFCYDDEQKA 176
S+ +E NV G + S + S + VV ES N + + F Y +E+KA
Sbjct: 266 SVLVENTATELNVGSEGTAKSESSEMSGLGSDSEIVVSKESVNGKEKSSGSFKYGEEEKA 325
Query: 177 RFNQILQHYVGTHNFHNLTTRIKPEDPSARRYIISFNANSVVCIDGIEFVKCEVVGQSFM 356
RFN+IL+HYVGTHNFHN TTR K EDP+ARR+I+SF+A+++V ++GIEFVKCEVVGQSFM
Sbjct: 326 RFNRILKHYVGTHNFHNFTTRTKAEDPAARRFIVSFDASAIVVVEGIEFVKCEVVGQSFM 385
Query: 357 LHQIRKMIGLAVAVMRNCAPESLMDVALRKDVRINVPTAPEVGLFLDECQFTSYNNQWKD 536
LHQIRKM+GLAVA+MRNCAPESL++ AL+KDV INVPTAPEVGL+LDEC FTSYN +WKD
Sbjct: 386 LHQIRKMMGLAVAIMRNCAPESLIEKALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKD 445
Query: 537 SHEPLTMDAYAEEAEDFKMKYIYPHTASMEHK 632
+HE ++M AY E AEDFKMK IY H AS EHK
Sbjct: 446 THEEVSMKAYEEAAEDFKMKQIYSHIASTEHK 477
>ref|XP_004145528.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
[Cucumis sativus]
Length = 519
Score = 263 bits (672), Expect = 3e-68
Identities = 132/212 (62%), Positives = 162/212 (76%), Gaps = 2/212 (0%)
Frame = +3
Query: 3 SISMEGELRASNVDECGNPSNRDSFLEER-STMQTVVHDES-NEQLTAKTKFCYDDEQKA 176
S+ +E NV G + S + S + VV ES N + + F Y +E+KA
Sbjct: 266 SVLVENTATELNVGSEGTAKSESSEMSGLGSDSEIVVSKESVNGKEKSSGSFKYGEEEKA 325
Query: 177 RFNQILQHYVGTHNFHNLTTRIKPEDPSARRYIISFNANSVVCIDGIEFVKCEVVGQSFM 356
RFN+IL+HYVGTHNFHN TTR K EDP+ARR+I+SF+A+++V ++GIEFVKCEVVGQSFM
Sbjct: 326 RFNRILKHYVGTHNFHNFTTRTKAEDPAARRFIVSFDASAIVVVEGIEFVKCEVVGQSFM 385
Query: 357 LHQIRKMIGLAVAVMRNCAPESLMDVALRKDVRINVPTAPEVGLFLDECQFTSYNNQWKD 536
LHQIRKM+GLAVA+MRNCAPESL++ AL+KDV INVPTAPEVGL+LDEC FTSYN +WKD
Sbjct: 386 LHQIRKMMGLAVAIMRNCAPESLIEKALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKD 445
Query: 537 SHEPLTMDAYAEEAEDFKMKYIYPHTASMEHK 632
+HE ++M AY E AEDFKMK IY H AS EHK
Sbjct: 446 THEEVSMKAYEEAAEDFKMKQIYSHIASTEHK 477
>ref|XP_006435279.1| hypothetical protein CICLE_v10000838mg [Citrus clementina]
gi|557537401|gb|ESR48519.1| hypothetical protein
CICLE_v10000838mg [Citrus clementina]
Length = 526
Score = 261 bits (666), Expect = 2e-67
Identities = 134/215 (62%), Positives = 159/215 (73%), Gaps = 5/215 (2%)
Frame = +3
Query: 3 SISMEGELRASNVDECGNPSNRDSFLEERSTMQTVVHDESN-----EQLTAKTKFCYDDE 167
S S+ L S E N D L+ S + V E E+L + FCY +E
Sbjct: 282 SESVNETLVESRTSETVQNENTDLSLDLDSKNDSKVMAEERSVNGEEKLLKGSGFCYGEE 341
Query: 168 QKARFNQILQHYVGTHNFHNLTTRIKPEDPSARRYIISFNANSVVCIDGIEFVKCEVVGQ 347
+K RFN+IL+HYVG+HNFHN TTR K EDPSARRYIISF A+SVV ++GI+F+KCEVVGQ
Sbjct: 342 EKKRFNRILKHYVGSHNFHNFTTRTKAEDPSARRYIISFGADSVVNVEGIDFLKCEVVGQ 401
Query: 348 SFMLHQIRKMIGLAVAVMRNCAPESLMDVALRKDVRINVPTAPEVGLFLDECQFTSYNNQ 527
SFMLHQIRKMIGLAVAV+RNCAPESL++ AL+KDV INVPTAPEVGL+LDEC F SYN +
Sbjct: 402 SFMLHQIRKMIGLAVAVVRNCAPESLIETALQKDVNINVPTAPEVGLYLDECIFASYNKK 461
Query: 528 WKDSHEPLTMDAYAEEAEDFKMKYIYPHTASMEHK 632
WKDSHE L+M AY EEAE+FKMK+I+ H A E K
Sbjct: 462 WKDSHEELSMKAYEEEAENFKMKHIFSHIARTEQK 496