BLASTX nr result
ID: Zingiber23_contig00038389
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00038389
(1032 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006482056.1| PREDICTED: probable mediator of RNA polymera... 200 9e-49
ref|XP_006430523.1| hypothetical protein CICLE_v10011717mg [Citr... 200 9e-49
ref|XP_002323230.1| hypothetical protein POPTR_0016s03310g [Popu... 189 2e-45
ref|XP_002323227.2| hypothetical protein POPTR_0016s03310g [Popu... 187 8e-45
ref|XP_002308874.2| transcription elongation factor-related fami... 186 1e-44
ref|XP_003624928.1| hypothetical protein MTR_7g089140 [Medicago ... 182 2e-43
gb|ESW17432.1| hypothetical protein PHAVU_007G239100g [Phaseolus... 182 2e-43
gb|AFK48326.1| unknown [Medicago truncatula] 182 2e-43
ref|XP_003624930.1| hypothetical protein MTR_7g089140 [Medicago ... 182 2e-43
ref|XP_006604318.1| PREDICTED: probable mediator of RNA polymera... 179 2e-42
ref|XP_003521115.1| PREDICTED: probable mediator of RNA polymera... 177 6e-42
ref|XP_006576774.1| PREDICTED: probable mediator of RNA polymera... 177 8e-42
ref|XP_006576772.1| PREDICTED: probable mediator of RNA polymera... 176 1e-41
gb|EOY08734.1| Transcription elongation factor family protein, p... 175 2e-41
ref|XP_006836259.1| hypothetical protein AMTR_s00101p00137160 [A... 172 1e-40
ref|XP_004493377.1| PREDICTED: probable mediator of RNA polymera... 171 3e-40
ref|XP_004493376.1| PREDICTED: probable mediator of RNA polymera... 171 3e-40
ref|XP_004493371.1| PREDICTED: probable mediator of RNA polymera... 171 3e-40
ref|XP_004303850.1| PREDICTED: probable mediator of RNA polymera... 170 7e-40
ref|XP_002277659.2| PREDICTED: uncharacterized protein LOC100250... 170 7e-40
>ref|XP_006482056.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b-like [Citrus sinensis]
Length = 448
Score = 200 bits (508), Expect = 9e-49
Identities = 119/261 (45%), Positives = 150/261 (57%), Gaps = 20/261 (7%)
Frame = +1
Query: 232 MERSSVSADYWRRFFRSSGADIFEVIEHAIFVAASDYPDEFRSKRDGIVEKFYTVLLPPC 411
M S S D WR +FRS+ DIF++I+HA+ VAA D P EF+ +RD I EK +T L C
Sbjct: 1 MSMKSGSLDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRC 60
Query: 412 FGCDRVA-----------------SQGAEAEEGRGSVNSKADSCIVDLEFSNRAVSNCT- 537
GCDRV G E E G GS SK +SC D SN+ VSN +
Sbjct: 61 SGCDRVELAVPSGNEFDDDEEDCKRDGCEFEAG-GSKESKVNSCRDD-HVSNQIVSNFSS 118
Query: 538 -DXXXXXXXXXXXXDRTLEQVLWIKDILSDHQDQSDDVXXXXXXXXXXXXXTVDVLEKTK 714
D + + +VL IK+IL + +D+SD V TVD L+ T+
Sbjct: 119 GDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATE 178
Query: 715 IGKAVNVLHKHNSKRIRHLSRSLIDGWKVIVDEWISATSAIT-GISDSLNPYAEDEEAGL 891
IGKAVN L KH SK+IRHL+R+LI+GWK +VDEW++AT AI G DS+NP DEE GL
Sbjct: 179 IGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKAIAEGTPDSVNPSVVDEEEGL 238
Query: 892 PSPPLDEGALFAAPTTSMMLS 954
PSPPLDE A FA P+ + LS
Sbjct: 239 PSPPLDELAFFAGPSAGIELS 259
>ref|XP_006430523.1| hypothetical protein CICLE_v10011717mg [Citrus clementina]
gi|557532580|gb|ESR43763.1| hypothetical protein
CICLE_v10011717mg [Citrus clementina]
Length = 448
Score = 200 bits (508), Expect = 9e-49
Identities = 119/261 (45%), Positives = 150/261 (57%), Gaps = 20/261 (7%)
Frame = +1
Query: 232 MERSSVSADYWRRFFRSSGADIFEVIEHAIFVAASDYPDEFRSKRDGIVEKFYTVLLPPC 411
M S S D WR +FRS+ DIF++I+HA+ VAA D P EF+ +RD I EK +T L C
Sbjct: 1 MSMKSGSLDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRC 60
Query: 412 FGCDRVA-----------------SQGAEAEEGRGSVNSKADSCIVDLEFSNRAVSNCT- 537
GCDRV G E E G GS SK +SC D SN+ VSN +
Sbjct: 61 SGCDRVELAVPSGNEFDDDEEDCKRDGCEFEAG-GSKESKVNSCRDD-HVSNQIVSNFSS 118
Query: 538 -DXXXXXXXXXXXXDRTLEQVLWIKDILSDHQDQSDDVXXXXXXXXXXXXXTVDVLEKTK 714
D + + +VL IK+IL + +D+SD V TVD L+ T+
Sbjct: 119 GDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATE 178
Query: 715 IGKAVNVLHKHNSKRIRHLSRSLIDGWKVIVDEWISATSAIT-GISDSLNPYAEDEEAGL 891
IGKAVN L KH SK+IRHL+R+LI+GWK +VDEW++AT AI G DS+NP DEE GL
Sbjct: 179 IGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKAIAEGTPDSVNPSVVDEEEGL 238
Query: 892 PSPPLDEGALFAAPTTSMMLS 954
PSPPLDE A FA P+ + LS
Sbjct: 239 PSPPLDELAFFAGPSAGIELS 259
>ref|XP_002323230.1| hypothetical protein POPTR_0016s03310g [Populus trichocarpa]
gi|222867860|gb|EEF04991.1| hypothetical protein
POPTR_0016s03310g [Populus trichocarpa]
Length = 474
Score = 189 bits (480), Expect = 2e-45
Identities = 119/287 (41%), Positives = 151/287 (52%), Gaps = 50/287 (17%)
Frame = +1
Query: 244 SVSADYWRRFFRSSGADIFEVIEHAIFVAASDYPDEFRSKRDGIVEKFYTVLLPPCFGCD 423
SVS DYWR +FR++ +DIF +I+HAI VAASD P EF+ +RD I E+ ++ L C GC+
Sbjct: 3 SVSLDYWRDYFRTASSDIFGIIDHAILVAASDCPKEFKLRRDRIAERLFSCRLIKCSGCN 62
Query: 424 RVA---------------------------------------SQGAEAEEGRGSVNSKAD 486
+V G EG GS SK +
Sbjct: 63 QVELAVPGHDEDERDDRGCCSKRRDGDNSGSDDDEEEVDIDIDDGGFEYEGGGSKESKVN 122
Query: 487 SCIVDLEFSN-------RAVSNCT-DXXXXXXXXXXXXDRTLEQVLWIKDILSDHQDQSD 642
S D +F N + VSN + +T+++VL IKDIL + QD+SD
Sbjct: 123 SSNRDNDFDNGEVNVNDQLVSNFSFGEAEALTDEIEEVSQTVDEVLRIKDILYNSQDESD 182
Query: 643 DVXXXXXXXXXXXXXTVDVLEKTKIGKAVNVLHKHNSKRIRHLSRSLIDGWKVIVDEWIS 822
V TVD L+ T+IGKAVN L KH SK+IRHL+R+LI+ WKV+VDEW S
Sbjct: 183 SVLLESLRKLRLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEDWKVLVDEWYS 242
Query: 823 ATSAI---TGISDSLNPYAEDEEAGLPSPPLDEGALFAAPTTSMMLS 954
A + I G DS+NP DEE GLPSPPLDEGA FA TSM LS
Sbjct: 243 AANVIRGNEGTPDSVNPSVVDEEEGLPSPPLDEGAFFATQPTSMELS 289
>ref|XP_002323227.2| hypothetical protein POPTR_0016s03310g [Populus trichocarpa]
gi|550320725|gb|EEF04988.2| hypothetical protein
POPTR_0016s03310g [Populus trichocarpa]
Length = 480
Score = 187 bits (474), Expect = 8e-45
Identities = 119/293 (40%), Positives = 151/293 (51%), Gaps = 56/293 (19%)
Frame = +1
Query: 244 SVSADYWRRFFRSSGADIFEVIEHAIFVAASDYPDEFRSKRDGIVEKFYTVLLPPCFGCD 423
SVS DYWR +FR++ +DIF +I+HAI VAASD P EF+ +RD I E+ ++ L C GC+
Sbjct: 3 SVSLDYWRDYFRTASSDIFGIIDHAILVAASDCPKEFKLRRDRIAERLFSCRLIKCSGCN 62
Query: 424 RVA---------------------------------------SQGAEAEEGRGSVNSKAD 486
+V G EG GS SK +
Sbjct: 63 QVELAVPGHDEDERDDRGCCSKRRDGDNSGSDDDEEEVDIDIDDGGFEYEGGGSKESKVN 122
Query: 487 SCIVDLEFSN-------RAVSNCT-DXXXXXXXXXXXXDRTLEQVLWIKDILSDHQDQSD 642
S D +F N + VSN + +T+++VL IKDIL + QD+SD
Sbjct: 123 SSNRDNDFDNGEVNVNDQLVSNFSFGEAEALTDEIEEVSQTVDEVLRIKDILYNSQDESD 182
Query: 643 DVXXXXXXXXXXXXXTVDVLEKTKIGKAVNVLHKHNSKRIRHLSRSLIDGWKVIVDEWIS 822
V TVD L+ T+IGKAVN L KH SK+IRHL+R+LI+ WKV+VDEW S
Sbjct: 183 SVLLESLRKLRLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEDWKVLVDEWYS 242
Query: 823 ATSAI---------TGISDSLNPYAEDEEAGLPSPPLDEGALFAAPTTSMMLS 954
A + I G DS+NP DEE GLPSPPLDEGA FA TSM LS
Sbjct: 243 AANVIRGRNLLASNEGTPDSVNPSVVDEEEGLPSPPLDEGAFFATQPTSMELS 295
>ref|XP_002308874.2| transcription elongation factor-related family protein [Populus
trichocarpa] gi|550335369|gb|EEE92397.2| transcription
elongation factor-related family protein [Populus
trichocarpa]
Length = 483
Score = 186 bits (473), Expect = 1e-44
Identities = 119/294 (40%), Positives = 149/294 (50%), Gaps = 57/294 (19%)
Frame = +1
Query: 244 SVSADYWRRFFRSSGADIFEVIEHAIFVAASDYPDEFRSKRDGIVEKFYTVLLPPCFGCD 423
SVS DYWR +FR++ +DIF +I+HAI VAASD P EF+ +RD I E+ ++ L C GC+
Sbjct: 3 SVSLDYWRNYFRTASSDIFGIIDHAILVAASDCPKEFKFRRDRIAERLFSCRLIKCSGCN 62
Query: 424 RVA---------------------------------------------SQGAEAEEGRGS 468
RV G EG GS
Sbjct: 63 RVELAVPGHDEGVSDDGGCCSKRRDGDNSGGVGGGDDDDDDDDVDIDIDDGGFEYEGGGS 122
Query: 469 VNSKADSCIVDLEFSNRAVSNCTDXXXXXXXXXXXX---------DRTLEQVLWIKDILS 621
SK +S D + N V N D +T+++VL IKDIL
Sbjct: 123 KGSKVNSSNRDNDIDNGEV-NVNDQLVYNFSYGDAEALTDEIEEVSQTVDEVLRIKDILY 181
Query: 622 DHQDQSDDVXXXXXXXXXXXXXTVDVLEKTKIGKAVNVLHKHNSKRIRHLSRSLIDGWKV 801
+ QD+SD V TVD L+ T+IGKAVNVL KH SK+IR+L+R+LI+ WKV
Sbjct: 182 NSQDESDSVLLESLRKLRLMALTVDTLKATEIGKAVNVLRKHGSKQIRYLARTLIEDWKV 241
Query: 802 IVDEWISATSAI---TGISDSLNPYAEDEEAGLPSPPLDEGALFAAPTTSMMLS 954
+VDEW S +AI G DS+NP DEE GLPSPPLDEGA FA TSM LS
Sbjct: 242 LVDEWYSTANAIRGDEGTPDSVNPSVVDEEEGLPSPPLDEGAFFATQPTSMELS 295
>ref|XP_003624928.1| hypothetical protein MTR_7g089140 [Medicago truncatula]
gi|355499943|gb|AES81146.1| hypothetical protein
MTR_7g089140 [Medicago truncatula]
Length = 447
Score = 182 bits (462), Expect = 2e-43
Identities = 110/263 (41%), Positives = 145/263 (55%), Gaps = 23/263 (8%)
Frame = +1
Query: 235 ERSSVSADYWRRFFRSSGADIFEVIEHAIFVAASDYPDEFRSKRDGIVEKFYTVLLPPCF 414
+ S S D WR +FRSS +DIF++I+HAI VAASD P EF+S+RDGI E+ ++V+L C
Sbjct: 3 QMKSESLDQWRSYFRSSNSDIFDIIDHAIVVAASDCPKEFKSRRDGIAERLFSVMLNRCK 62
Query: 415 GCDRVASQGAEAEEG-----RGSVNSKAD-SCIVDLEFSNRAVSNCTDXXXXXXXXXXXX 576
GC++V + + G R SV A VD V +
Sbjct: 63 GCEKVELSVPDDDNGDELCKRSSVREGASKESKVDCSREENGVMDANPISNYSFGEAEAL 122
Query: 577 DRTLE-------QVLWIKDILSDHQDQSDDVXXXXXXXXXXXXXTVDVLEKTKIGKAVNV 735
LE +V IK+IL++H+D+SD V VD+L+ T+IGKAVN
Sbjct: 123 TDELEEQSQLVAEVTRIKEILNNHEDESDSVLFESLRRLQLMQLCVDLLKSTEIGKAVNH 182
Query: 736 LHKHNSKRIRHLSRSLIDGWKVIVDEWISATSAI------TGISDSLNPYA----EDEEA 885
L KH SK IR L+R+LIDGWK +V+ W+ AT+ G DS NP E+EE
Sbjct: 183 LRKHGSKDIRQLARTLIDGWKELVNAWVKATTTTPVAASEEGTPDSRNPSVVENEEEEEG 242
Query: 886 GLPSPPLDEGALFAAPTTSMMLS 954
GLPSPPLDEGA F APT ++ LS
Sbjct: 243 GLPSPPLDEGAFFVAPTGTIELS 265
>gb|ESW17432.1| hypothetical protein PHAVU_007G239100g [Phaseolus vulgaris]
Length = 457
Score = 182 bits (461), Expect = 2e-43
Identities = 107/265 (40%), Positives = 144/265 (54%), Gaps = 30/265 (11%)
Frame = +1
Query: 250 SADYWRRFFRSSGADIFEVIEHAIFVAASDYPDEFRSKRDGIVEKFYTVLLPPCFGCDRV 429
S DYWR +F ++ +DIF +I+HAI VAASD P+EFR +RDGI E+ ++ L C GC+RV
Sbjct: 8 SLDYWRNYFGAANSDIFGIIDHAIMVAASDCPEEFRMRRDGIAERLFSCRLSRCLGCERV 67
Query: 430 ---ASQGAEAEEGRGSVNSKADSCIVDLEF----------------------SNRAVSNC 534
S + EG G S D + E +NR +
Sbjct: 68 ELAVSVDDDGGEGGGGCKSGVDGAGAEFESEAGASKESKVNSARDDDPGEMNTNRVSNYS 127
Query: 535 TDXXXXXXXXXXXXDRTLEQVLWIKDILSDHQDQSDDVXXXXXXXXXXXXXTVDVLEKTK 714
+ +E+V IKD+L ++++ SD V TVD+L+ T+
Sbjct: 128 YGEAEALTDEIEEESQYVEEVFRIKDVLLNYEEASDSVLFDSLRRLQLMELTVDLLKATE 187
Query: 715 IGKAVNVLHKHNSKRIRHLSRSLIDGWKVIVDEWISATSAIT---GISDSLNP--YAEDE 879
IGKAVN L KH S I L+R+LIDGWK +VD W+ AT+A G DS+NP +++
Sbjct: 188 IGKAVNPLRKHGSSDICRLARTLIDGWKEMVDTWVKATTAFAGSEGTPDSVNPSVVEDED 247
Query: 880 EAGLPSPPLDEGALFAAPTTSMMLS 954
E GLPSPP+DEGALFAAPT SM LS
Sbjct: 248 EEGLPSPPMDEGALFAAPTGSMELS 272
>gb|AFK48326.1| unknown [Medicago truncatula]
Length = 451
Score = 182 bits (461), Expect = 2e-43
Identities = 110/263 (41%), Positives = 145/263 (55%), Gaps = 23/263 (8%)
Frame = +1
Query: 235 ERSSVSADYWRRFFRSSGADIFEVIEHAIFVAASDYPDEFRSKRDGIVEKFYTVLLPPCF 414
+ S S D WR +FRSS +DIF++I+HAI VAASD P EF+S+RDGI E+ ++V+L C
Sbjct: 3 QMKSGSLDQWRSYFRSSNSDIFDIIDHAIVVAASDCPKEFKSRRDGIAERLFSVMLNRCK 62
Query: 415 GCDRVASQGAEAEEG-----RGSVNSKAD-SCIVDLEFSNRAVSNCTDXXXXXXXXXXXX 576
GC++V + + G R SV A VD V +
Sbjct: 63 GCEKVELSVPDDDNGDELCKRSSVREGASKESKVDCSREENGVMDANPISNYSFGEAEAL 122
Query: 577 DRTLE-------QVLWIKDILSDHQDQSDDVXXXXXXXXXXXXXTVDVLEKTKIGKAVNV 735
LE +V IK+IL++H+D+SD V VD+L+ T+IGKAVN
Sbjct: 123 TDELEEQSQLVAEVTRIKEILNNHEDESDSVLFESLRRLQLMQLCVDLLKSTEIGKAVNH 182
Query: 736 LHKHNSKRIRHLSRSLIDGWKVIVDEWISATSAI------TGISDSLNPYA----EDEEA 885
L KH SK IR L+R+LIDGWK +V+ W+ AT+ G DS NP E+EE
Sbjct: 183 LRKHGSKDIRQLARTLIDGWKELVNAWVKATTTTPVAASEEGTPDSRNPSVVENEEEEEG 242
Query: 886 GLPSPPLDEGALFAAPTTSMMLS 954
GLPSPPLDEGA F APT ++ LS
Sbjct: 243 GLPSPPLDEGAFFVAPTGTIELS 265
>ref|XP_003624930.1| hypothetical protein MTR_7g089140 [Medicago truncatula]
gi|355499945|gb|AES81148.1| hypothetical protein
MTR_7g089140 [Medicago truncatula]
Length = 444
Score = 182 bits (461), Expect = 2e-43
Identities = 110/260 (42%), Positives = 144/260 (55%), Gaps = 23/260 (8%)
Frame = +1
Query: 244 SVSADYWRRFFRSSGADIFEVIEHAIFVAASDYPDEFRSKRDGIVEKFYTVLLPPCFGCD 423
S S D WR +FRSS +DIF++I+HAI VAASD P EF+S+RDGI E+ ++V+L C GC+
Sbjct: 3 SESLDQWRSYFRSSNSDIFDIIDHAIVVAASDCPKEFKSRRDGIAERLFSVMLNRCKGCE 62
Query: 424 RVASQGAEAEEG-----RGSVNSKAD-SCIVDLEFSNRAVSNCTDXXXXXXXXXXXXDRT 585
+V + + G R SV A VD V +
Sbjct: 63 KVELSVPDDDNGDELCKRSSVREGASKESKVDCSREENGVMDANPISNYSFGEAEALTDE 122
Query: 586 LE-------QVLWIKDILSDHQDQSDDVXXXXXXXXXXXXXTVDVLEKTKIGKAVNVLHK 744
LE +V IK+IL++H+D+SD V VD+L+ T+IGKAVN L K
Sbjct: 123 LEEQSQLVAEVTRIKEILNNHEDESDSVLFESLRRLQLMQLCVDLLKSTEIGKAVNHLRK 182
Query: 745 HNSKRIRHLSRSLIDGWKVIVDEWISATSAI------TGISDSLNPYA----EDEEAGLP 894
H SK IR L+R+LIDGWK +V+ W+ AT+ G DS NP E+EE GLP
Sbjct: 183 HGSKDIRQLARTLIDGWKELVNAWVKATTTTPVAASEEGTPDSRNPSVVENEEEEEGGLP 242
Query: 895 SPPLDEGALFAAPTTSMMLS 954
SPPLDEGA F APT ++ LS
Sbjct: 243 SPPLDEGAFFVAPTGTIELS 262
>ref|XP_006604318.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b-like isoform X1 [Glycine max]
gi|571556809|ref|XP_006604319.1| PREDICTED: probable
mediator of RNA polymerase II transcription subunit
26b-like isoform X2 [Glycine max]
Length = 458
Score = 179 bits (454), Expect = 2e-42
Identities = 116/269 (43%), Positives = 146/269 (54%), Gaps = 32/269 (11%)
Frame = +1
Query: 244 SVSADYWRRFFRSSGADIFEVIEHAIFVAASDYPDEFRSKRDGIVEKFYTVLLPPCFGCD 423
S S D WR++F S+ +DIFE+IEHAI VAASD P EFR +RDGI E+ ++ L C GCD
Sbjct: 3 SWSLDEWRKYFGSANSDIFEIIEHAIIVAASDCPKEFRVRRDGIAERLFSCRLTRCVGCD 62
Query: 424 R----VASQGAEAEEGRG-SVNSKADSCIVDLEFSNRAVS-------------NCTDXXX 549
R V + E +G G N K+ +EF S N D
Sbjct: 63 RVELAVGADSKEKHDGDGDDDNDKSGYERDGVEFEGAGASKESKVNGDGGRDVNLGDSNY 122
Query: 550 XXXXXXXXXD------RTLEQVLWIKDILSDHQDQSDDVXXXXXXXXXXXXXTVDVLEKT 711
D R + ++L I+D+L + +D+S+ V TVD L+ T
Sbjct: 123 SFGEAEALSDEMEEESRYVAEILRIRDVLLNPEDESEAVLFDSLRRLQLMELTVDCLKAT 182
Query: 712 KIGKAVNVLHKHNSKRIRHLSRSLIDGWKVIVDEWISA--TSAIT----GISDSLNPYA- 870
+IGKAVN L KH SK IR LSR+LIDGWK +VDEW+ A T+AIT G DS+NP
Sbjct: 183 EIGKAVNPLRKHGSKDIRQLSRTLIDGWKEMVDEWVKATTTTAITGSEEGTPDSVNPSVV 242
Query: 871 -EDEEAGLPSPPLDEGALFAAPTTSMMLS 954
+DEE GLPSPPLDEGA F SM LS
Sbjct: 243 DDDEEEGLPSPPLDEGAFFVTQAGSMELS 271
>ref|XP_003521115.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b-like isoform X1 [Glycine max]
Length = 452
Score = 177 bits (449), Expect = 6e-42
Identities = 114/262 (43%), Positives = 142/262 (54%), Gaps = 25/262 (9%)
Frame = +1
Query: 244 SVSADYWRRFFRSSGADIFEVIEHAIFVAASDYPDEFRSKRDGIVEKFYTVLLPPCFGCD 423
S S D WR +F S+ +DIFE+IEHAI VAASD P EFR +RD I E+ ++ L C GCD
Sbjct: 3 SWSLDEWRNYFGSANSDIFEIIEHAIIVAASDCPKEFRVRRDWIAERLFSCRLTRCVGCD 62
Query: 424 RV-----ASQGAEAEEGRGSVNSKADSCIVDLEFSNRAVS---------NCTDXXXXXXX 561
RV A E +G N K+ +EF S N D
Sbjct: 63 RVELAVGADSKKEKHDGDDGDNDKSGFERDGVEFEGAGASKESKVNGDANLGDSNYSFGE 122
Query: 562 XXXXXDRTLEQ------VLWIKDILSDHQDQSDDVXXXXXXXXXXXXXTVDVLEKTKIGK 723
D E+ +L IKD+L + +D+S+ V TVD L+ T+IGK
Sbjct: 123 AEALSDEMEEESQYVAEILRIKDVLLNPEDESEAVIFESLRRLQLMELTVDCLKATEIGK 182
Query: 724 AVNVLHKHNSKRIRHLSRSLIDGWKVIVDEWISA--TSAIT-GISDSLNPYA--EDEEAG 888
AVN L KH SK IR L+R+LI+GWK +VDEW+ A T+AIT G DS+NP +DEE G
Sbjct: 183 AVNPLRKHGSKDIRQLARTLINGWKEMVDEWVKATTTTAITEGTPDSVNPSVVDDDEEEG 242
Query: 889 LPSPPLDEGALFAAPTTSMMLS 954
LPSPPLDEGA F SM LS
Sbjct: 243 LPSPPLDEGAFFVTQAGSMELS 264
>ref|XP_006576774.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b-like isoform X4 [Glycine max]
Length = 453
Score = 177 bits (448), Expect = 8e-42
Identities = 114/263 (43%), Positives = 142/263 (53%), Gaps = 26/263 (9%)
Frame = +1
Query: 244 SVSADYWRRFFRSSGADIFEVIEHAIFVAASDYPDEFRSKRDGIVEKFYTVLLPPCFGCD 423
S S D WR +F S+ +DIFE+IEHAI VAASD P EFR +RD I E+ ++ L C GCD
Sbjct: 3 SWSLDEWRNYFGSANSDIFEIIEHAIIVAASDCPKEFRVRRDWIAERLFSCRLTRCVGCD 62
Query: 424 RV-----ASQGAEAEEGRGSVNSKADSCIVDLEFSNRAVS---------NCTDXXXXXXX 561
RV A E +G N K+ +EF S N D
Sbjct: 63 RVELAVGADSKKEKHDGDDGDNDKSGFERDGVEFEGAGASKESKVNGDANLGDSNYSFGE 122
Query: 562 XXXXXDRTLEQ------VLWIKDILSDHQDQSDDVXXXXXXXXXXXXXTVDVLEKTKIGK 723
D E+ +L IKD+L + +D+S+ V TVD L+ T+IGK
Sbjct: 123 AEALSDEMEEESQYVAEILRIKDVLLNPEDESEAVIFESLRRLQLMELTVDCLKATEIGK 182
Query: 724 AVNVLHKHNSKRIRHLSRSLIDGWKVIVDEWISA--TSAIT--GISDSLNPYA--EDEEA 885
AVN L KH SK IR L+R+LI+GWK +VDEW+ A T+AIT G DS+NP +DEE
Sbjct: 183 AVNPLRKHGSKDIRQLARTLINGWKEMVDEWVKATTTTAITEEGTPDSVNPSVVDDDEEE 242
Query: 886 GLPSPPLDEGALFAAPTTSMMLS 954
GLPSPPLDEGA F SM LS
Sbjct: 243 GLPSPPLDEGAFFVTQAGSMELS 265
>ref|XP_006576772.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b-like isoform X2 [Glycine max]
gi|571445333|ref|XP_006576773.1| PREDICTED: probable
mediator of RNA polymerase II transcription subunit
26b-like isoform X3 [Glycine max]
Length = 455
Score = 176 bits (446), Expect = 1e-41
Identities = 114/265 (43%), Positives = 142/265 (53%), Gaps = 28/265 (10%)
Frame = +1
Query: 244 SVSADYWRRFFRSSGADIFEVIEHAIFVAASDYPDEFRSKRDGIVEKFYTVLLPPCFGCD 423
S S D WR +F S+ +DIFE+IEHAI VAASD P EFR +RD I E+ ++ L C GCD
Sbjct: 3 SWSLDEWRNYFGSANSDIFEIIEHAIIVAASDCPKEFRVRRDWIAERLFSCRLTRCVGCD 62
Query: 424 RV-----ASQGAEAEEGRGSVNSKADSCIVDLEFSNRAVS---------NCTDXXXXXXX 561
RV A E +G N K+ +EF S N D
Sbjct: 63 RVELAVGADSKKEKHDGDDGDNDKSGFERDGVEFEGAGASKESKVNGDANLGDSNYSFGE 122
Query: 562 XXXXXDRTLEQ------VLWIKDILSDHQDQSDDVXXXXXXXXXXXXXTVDVLEKTKIGK 723
D E+ +L IKD+L + +D+S+ V TVD L+ T+IGK
Sbjct: 123 AEALSDEMEEESQYVAEILRIKDVLLNPEDESEAVIFESLRRLQLMELTVDCLKATEIGK 182
Query: 724 AVNVLHKHNSKRIRHLSRSLIDGWKVIVDEWISA--TSAIT----GISDSLNPYA--EDE 879
AVN L KH SK IR L+R+LI+GWK +VDEW+ A T+AIT G DS+NP +DE
Sbjct: 183 AVNPLRKHGSKDIRQLARTLINGWKEMVDEWVKATTTTAITGSEEGTPDSVNPSVVDDDE 242
Query: 880 EAGLPSPPLDEGALFAAPTTSMMLS 954
E GLPSPPLDEGA F SM LS
Sbjct: 243 EEGLPSPPLDEGAFFVTQAGSMELS 267
>gb|EOY08734.1| Transcription elongation factor family protein, putative isoform 1
[Theobroma cacao]
Length = 464
Score = 175 bits (444), Expect = 2e-41
Identities = 110/278 (39%), Positives = 142/278 (51%), Gaps = 37/278 (13%)
Frame = +1
Query: 232 MERSSVSADYWRRFFRSSGADIFEVIEHAIFVAASDYPDEFRSKRDGIVEKFYTVLLPPC 411
M V + WR +FR++ +DIF++I+HAI VAA D P EFR +RD I EK +T C
Sbjct: 1 MAMKGVPLEQWRDYFRTANSDIFDIIDHAITVAALDCPKEFRLRRDQIAEKLFTCKFTRC 60
Query: 412 FGCDRVA------------------------SQGAEAEEGRGSVNSKADSCIVDLEFSNR 519
GCDRV G E E GS SKA+S D +
Sbjct: 61 SGCDRVKLVVPEYGADNGRGCRARFKGEADEEDGCEFFEAGGSKESKANSSRDDPLINQI 120
Query: 520 AVSNCTDXXXXXXXXXXXXDRTLEQVLWIKDILSDHQDQSDDVXXXXXXXXXXXXXTVDV 699
A + + +V IK+IL + QD+SD V TVD+
Sbjct: 121 ASNYSYGEAEALTDEIEEESMMVGEVYRIKEILHNSQDESDSVLFDSLRRLQLMALTVDI 180
Query: 700 LEKTKIGKAVNVLHKHNSKRIRHLSRSLIDGWKVIVDEWISATSAIT-GISDSLNPYA-- 870
L+ T IGKAVN + KH+SK+IRHL+++LIDGWK +VDEW++A AI G +S+NP
Sbjct: 181 LKATGIGKAVNRVRKHSSKQIRHLAQTLIDGWKELVDEWVNAAKAIAEGTPESVNPSVLD 240
Query: 871 ----------EDEEAGLPSPPLDEGALFAAPTTSMMLS 954
E+EE GLPSPPLD GA FA TSM LS
Sbjct: 241 NEEEKEEEEEEEEEEGLPSPPLDVGAFFATQPTSMELS 278
>ref|XP_006836259.1| hypothetical protein AMTR_s00101p00137160 [Amborella trichopoda]
gi|548838759|gb|ERM99112.1| hypothetical protein
AMTR_s00101p00137160 [Amborella trichopoda]
Length = 454
Score = 172 bits (437), Expect = 1e-40
Identities = 106/242 (43%), Positives = 139/242 (57%), Gaps = 9/242 (3%)
Frame = +1
Query: 256 DYWRRFFRSSGADIFEVIEHAIFVAASDYPDEFRSKRDGIVEKFYTVLLPPCFGCDR--V 429
D WR FFR +G+DIF VIE+AI +AASD P EFR +RD I E+ Y L C CD V
Sbjct: 7 DDWREFFREAGSDIFSVIEYAITIAASDCPKEFRLRRDKIAERLYACKLIRCGECDNVTV 66
Query: 430 ASQGAEAEE----GRGSVNSKADSCIVDLEFSNRAVSNCTDXXXXXXXXXXXXDRTLEQV 597
A G E E G G SK +S D++ NR + D + +V
Sbjct: 67 AMPGEERESGFEGGSGGKESKVNSSSDDVD-RNRISNYSYDEAEALTEEIEEESEIVREV 125
Query: 598 LWIKDILSDHQDQSDDVXXXXXXXXXXXXXTVDVLEKTKIGKAVNVLHKHNSKRIRHLSR 777
IK++LS + D+S + +V+ L+ T+IGKAVN L KH SK+IRH+ +
Sbjct: 126 CRIKEVLS-NSDESHGLLYESLRRLQLMQLSVETLKATEIGKAVNALRKHQSKQIRHIVK 184
Query: 778 SLIDGWKVIVDEWISATSAITGIS-DSLNPYA--EDEEAGLPSPPLDEGALFAAPTTSMM 948
LI+GWK +VDEW++ +A+TG S DS+ P E+EE GLPSPPLDEGA A TTS+
Sbjct: 185 MLINGWKDLVDEWVNTATAMTGGSPDSVKPAVAEEEEEEGLPSPPLDEGAFLATQTTSIE 244
Query: 949 LS 954
LS
Sbjct: 245 LS 246
>ref|XP_004493377.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b-like isoform X7 [Cicer arietinum]
Length = 445
Score = 171 bits (434), Expect = 3e-40
Identities = 108/259 (41%), Positives = 147/259 (56%), Gaps = 22/259 (8%)
Frame = +1
Query: 244 SVSADYWRRFFRSSGADIFEVIEHAIFVAASDYPDEFRSKRDGIVEKFYTVLLPPCFGCD 423
S S D WR +FRSS +DIF++I++AI VAASD P EF+ +RD I E+ ++ L C GCD
Sbjct: 3 SGSLDQWRNYFRSSNSDIFDIIDYAIVVAASDCPKEFKLRRDKIAERLFSCKLTRCLGCD 62
Query: 424 RV--ASQGAEAEEG----------RGSVNSKADSCIVDLEFSNRAVSNCTDXXXXXXXXX 567
+V A G + EG GS SK + L VSN +
Sbjct: 63 KVELAVNGDDDHEGCKSDGVEFGAGGSKESKVNDH--GLMMDGNLVSNYSFGEAEALTDE 120
Query: 568 XXXD-RTLEQVLWIKDILSDHQDQSDDVXXXXXXXXXXXXXTVDVLEKTKIGKAVNVLHK 744
+ + + +VL I+DIL++ ++SD V +VD+L+ T+IGK VN L K
Sbjct: 121 IEEESQFVGEVLRIRDILNNRDEESDSVLFESLRRLELMELSVDLLKATEIGKVVNPLRK 180
Query: 745 HNSKRIRHLSRSLIDGWKVIVDEW--ISATSAIT----GISDSLNPYAEDE---EAGLPS 897
H SK +R L+R+LIDGWK +VD W ++ T+AIT G DS+NP D+ E GLPS
Sbjct: 181 HGSKEVRQLARTLIDGWKEMVDAWVKVTTTTAITGSEGGTPDSVNPSVVDDEELEEGLPS 240
Query: 898 PPLDEGALFAAPTTSMMLS 954
PPLDEGA F APT ++ LS
Sbjct: 241 PPLDEGAFFVAPTGTIELS 259
>ref|XP_004493376.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b-like isoform X6 [Cicer arietinum]
Length = 441
Score = 171 bits (434), Expect = 3e-40
Identities = 108/259 (41%), Positives = 147/259 (56%), Gaps = 22/259 (8%)
Frame = +1
Query: 244 SVSADYWRRFFRSSGADIFEVIEHAIFVAASDYPDEFRSKRDGIVEKFYTVLLPPCFGCD 423
S S D WR +FRSS +DIF++I++AI VAASD P EF+ +RD I E+ ++ L C GCD
Sbjct: 3 SGSLDQWRNYFRSSNSDIFDIIDYAIVVAASDCPKEFKLRRDKIAERLFSCKLTRCLGCD 62
Query: 424 RV--ASQGAEAEEG----------RGSVNSKADSCIVDLEFSNRAVSNCTDXXXXXXXXX 567
+V A G + EG GS SK + L VSN +
Sbjct: 63 KVELAVNGDDDHEGCKSDGVEFGAGGSKESKVNDH--GLMMDGNLVSNYSFGEAEALTDE 120
Query: 568 XXXD-RTLEQVLWIKDILSDHQDQSDDVXXXXXXXXXXXXXTVDVLEKTKIGKAVNVLHK 744
+ + + +VL I+DIL++ ++SD V +VD+L+ T+IGK VN L K
Sbjct: 121 IEEESQFVGEVLRIRDILNNRDEESDSVLFESLRRLELMELSVDLLKATEIGKVVNPLRK 180
Query: 745 HNSKRIRHLSRSLIDGWKVIVDEW--ISATSAIT----GISDSLNPYAEDE---EAGLPS 897
H SK +R L+R+LIDGWK +VD W ++ T+AIT G DS+NP D+ E GLPS
Sbjct: 181 HGSKEVRQLARTLIDGWKEMVDAWVKVTTTTAITGSEGGTPDSVNPSVVDDEELEEGLPS 240
Query: 898 PPLDEGALFAAPTTSMMLS 954
PPLDEGA F APT ++ LS
Sbjct: 241 PPLDEGAFFVAPTGTIELS 259
>ref|XP_004493371.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b-like isoform X1 [Cicer arietinum]
gi|502108027|ref|XP_004493372.1| PREDICTED: probable
mediator of RNA polymerase II transcription subunit
26b-like isoform X2 [Cicer arietinum]
gi|502108031|ref|XP_004493373.1| PREDICTED: probable
mediator of RNA polymerase II transcription subunit
26b-like isoform X3 [Cicer arietinum]
gi|502108035|ref|XP_004493374.1| PREDICTED: probable
mediator of RNA polymerase II transcription subunit
26b-like isoform X4 [Cicer arietinum]
gi|502108039|ref|XP_004493375.1| PREDICTED: probable
mediator of RNA polymerase II transcription subunit
26b-like isoform X5 [Cicer arietinum]
Length = 451
Score = 171 bits (434), Expect = 3e-40
Identities = 108/259 (41%), Positives = 147/259 (56%), Gaps = 22/259 (8%)
Frame = +1
Query: 244 SVSADYWRRFFRSSGADIFEVIEHAIFVAASDYPDEFRSKRDGIVEKFYTVLLPPCFGCD 423
S S D WR +FRSS +DIF++I++AI VAASD P EF+ +RD I E+ ++ L C GCD
Sbjct: 3 SGSLDQWRNYFRSSNSDIFDIIDYAIVVAASDCPKEFKLRRDKIAERLFSCKLTRCLGCD 62
Query: 424 RV--ASQGAEAEEG----------RGSVNSKADSCIVDLEFSNRAVSNCTDXXXXXXXXX 567
+V A G + EG GS SK + L VSN +
Sbjct: 63 KVELAVNGDDDHEGCKSDGVEFGAGGSKESKVNDH--GLMMDGNLVSNYSFGEAEALTDE 120
Query: 568 XXXD-RTLEQVLWIKDILSDHQDQSDDVXXXXXXXXXXXXXTVDVLEKTKIGKAVNVLHK 744
+ + + +VL I+DIL++ ++SD V +VD+L+ T+IGK VN L K
Sbjct: 121 IEEESQFVGEVLRIRDILNNRDEESDSVLFESLRRLELMELSVDLLKATEIGKVVNPLRK 180
Query: 745 HNSKRIRHLSRSLIDGWKVIVDEW--ISATSAIT----GISDSLNPYAEDE---EAGLPS 897
H SK +R L+R+LIDGWK +VD W ++ T+AIT G DS+NP D+ E GLPS
Sbjct: 181 HGSKEVRQLARTLIDGWKEMVDAWVKVTTTTAITGSEGGTPDSVNPSVVDDEELEEGLPS 240
Query: 898 PPLDEGALFAAPTTSMMLS 954
PPLDEGA F APT ++ LS
Sbjct: 241 PPLDEGAFFVAPTGTIELS 259
>ref|XP_004303850.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b-like [Fragaria vesca subsp. vesca]
Length = 458
Score = 170 bits (431), Expect = 7e-40
Identities = 105/260 (40%), Positives = 146/260 (56%), Gaps = 22/260 (8%)
Frame = +1
Query: 241 SSVSADYWRRFFRSSGADIFEVIEHAIFVAASDYPDEFRSKRDGIVEKFYTVLLPPCFGC 420
SS S +YWR +FR++ +DIF +I+HAI VAA D P EFR +RD + E ++ + C GC
Sbjct: 10 SSSSLNYWRSYFRTANSDIFGIIDHAIMVAAVDCPKEFRLRRDRVAELLFSCRMSRCSGC 69
Query: 421 DRVA-------SQGAEAEEGRG---------SVNSKADSCIVDLEFSNRAVSNCTDXXXX 552
++V +G E +G G S SK +S D + + SN
Sbjct: 70 EKVELVVPCDHGEGDEGVDGSGGDGDFGGGASKESKVNSTSRDDDQVMKNDSNY-GLAEA 128
Query: 553 XXXXXXXXDRTLEQVLWIKDILSDHQDQSDDVXXXXXXXXXXXXXTVDVLEKTKIGKAVN 732
+ E+VL IK++ + + +SD V +V+ L+ T+IGKAVN
Sbjct: 129 LTDEIEEESQVFEEVLRIKEVFQNSEHESDAVLYESLRKLELMALSVETLKATEIGKAVN 188
Query: 733 VLHKHNSKRIRHLSRSLIDGWKVIVDEWISATSAITG-----ISDSLNPYAE-DEEAGLP 894
L KH S +IR+L R+LIDGWKV+VDEW++AT+AI ISD ++P + D E GLP
Sbjct: 189 RLRKHGSVKIRNLVRALIDGWKVMVDEWVNATTAIASGGTEVISDCVDPSVDYDFEEGLP 248
Query: 895 SPPLDEGALFAAPTTSMMLS 954
+PPLDEGA FA TTSM LS
Sbjct: 249 TPPLDEGAFFATQTTSMELS 268
>ref|XP_002277659.2| PREDICTED: uncharacterized protein LOC100250012 [Vitis vinifera]
Length = 521
Score = 170 bits (431), Expect = 7e-40
Identities = 107/258 (41%), Positives = 145/258 (56%), Gaps = 17/258 (6%)
Frame = +1
Query: 232 MERSSVSADYWRRFFRSSGADIFEVIEHAIFVAASDYPDEFRSKRDGIVEKFYTVLLPPC 411
M +S + D WR +FR++ +DIF +IEHAI VAASD P EFR +RD I E+ ++ L C
Sbjct: 1 MATNSGALDQWRNYFRTANSDIFGIIEHAILVAASDCPKEFRLRRDRIAERLFSCKLTRC 60
Query: 412 FGCDRVASQGAEAEEG-----------RGSVNSKADSCIVDL-EFSNRAVSNCTDXXXXX 555
FGCDRV E + G S SKA+S D E + VSN +
Sbjct: 61 FGCDRVELAVPENDGGGCKIEFDMDVNSSSKESKANSIREDHGEMNMNQVSNYSYGEAEA 120
Query: 556 XXXXXXXDRTLE-QVLWIKDILSDHQDQSDDVXXXXXXXXXXXXXTVDVLEKTKIGKAVN 732
+ + +VL I++IL +D+SD V +VD L+ T+IGKAVN
Sbjct: 121 LTDEIEEETQIAGEVLRIREILEHSKDESDSVLFDSLRRLQLMVLSVDNLKATEIGKAVN 180
Query: 733 VLHKHNSKRIRHLSRSLIDGWKVIVDEWISATSAIT-GISDSLNPYA---EDEEAGLPSP 900
L KH SK+IR L+R+LID WK +VDEW++AT+AI G DS+NP +D+E GLP P
Sbjct: 181 GLRKHGSKQIRQLARTLIDEWKDMVDEWVNATAAIAEGTPDSVNPSVVDDDDDEEGLPFP 240
Query: 901 PLDEGALFAAPTTSMMLS 954
P+DE + TS+ LS
Sbjct: 241 PMDELSFLTTQPTSLELS 258