BLASTX nr result

ID: Zingiber23_contig00038300 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00038300
         (698 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001169763.1| uncharacterized protein LOC100383647 [Zea ma...    57   4e-06
gb|AFW76129.1| hypothetical protein ZEAMMB73_949197 [Zea mays] g...    57   7e-06

>ref|NP_001169763.1| uncharacterized protein LOC100383647 [Zea mays]
           gi|224031539|gb|ACN34845.1| unknown [Zea mays]
          Length = 410

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 48/175 (27%), Positives = 73/175 (41%), Gaps = 14/175 (8%)
 Frame = +3

Query: 180 AGDNDLAVTRTLVALFKMISNKVLITYKRKRLSANAKPAILKSDSSVKVDGE-------- 335
           A +  L  T T   L ++IS + L     KR   +AK + L   SS  +D +        
Sbjct: 141 AWECSLPDTNTPKPLTELISARDLCISILKRKICSAKDSELSRTSST-IDRDDNLNNPLF 199

Query: 336 HCFRCGNVDVNENLLVCHSCFGSYHLRCIESSSEYVPEDSWLCSTCTEKCDTEVPLLLQF 515
            C +CG ++    +L+C  C G++HL C     + +PE+ W C  C  K           
Sbjct: 200 ECTKCGLMEDPSKMLICDCCEGAFHLLCCNPHVKKIPEEEWYCLACKRKKPKRQRGKFAN 259

Query: 516 GKIIENEIVGEPEMGLMKLGDQRVLLNSRSLEE------KFIEENPSLMNPTIKR 662
            K+  ++ +  P  GL  + D  +LL+S S E       KF  E P    P   R
Sbjct: 260 PKVESSKGIQRPRRGLGPIRD--MLLDSESYESGVRIGTKFQAEVPKWSGPISSR 312


>gb|AFW76129.1| hypothetical protein ZEAMMB73_949197 [Zea mays]
           gi|413943481|gb|AFW76130.1| hypothetical protein
           ZEAMMB73_949197 [Zea mays]
          Length = 321

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 47/171 (27%), Positives = 72/171 (42%), Gaps = 14/171 (8%)
 Frame = +3

Query: 180 AGDNDLAVTRTLVALFKMISNKVLITYKRKRLSANAKPAILKSDSSVKVDGE-------- 335
           A +  L  T T   L ++IS + L     KR   +AK + L   SS  +D +        
Sbjct: 141 AWECSLPDTNTPKPLTELISARDLCISILKRKICSAKDSELSRTSST-IDRDDNLNNPLF 199

Query: 336 HCFRCGNVDVNENLLVCHSCFGSYHLRCIESSSEYVPEDSWLCSTCTEKCDTEVPLLLQF 515
            C +CG ++    +L+C  C G++HL C     + +PE+ W C  C  K           
Sbjct: 200 ECTKCGLMEDPSKMLICDCCEGAFHLLCCNPHVKKIPEEEWYCLACKRKKPKRQRGKFAN 259

Query: 516 GKIIENEIVGEPEMGLMKLGDQRVLLNSRSLEE------KFIEENPSLMNP 650
            K+  ++ +  P  GL  + D  +LL+S S E       KF  E P    P
Sbjct: 260 PKVESSKGIQRPRRGLGPIRD--MLLDSESYESGVRIGTKFQAEVPKWSGP 308


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