BLASTX nr result

ID: Zingiber23_contig00038048 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00038048
         (280 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002461240.1| hypothetical protein SORBIDRAFT_02g043430 [S...   103   3e-20
gb|EMT06436.1| hypothetical protein F775_22799 [Aegilops tauschii]    101   9e-20
tpg|DAA64189.1| TPA: hypothetical protein ZEAMMB73_647521 [Zea m...   100   2e-19
ref|XP_003562422.1| PREDICTED: pentatricopeptide repeat-containi...   100   2e-19
dbj|BAK04970.1| predicted protein [Hordeum vulgare subsp. vulgare]     99   6e-19
ref|NP_001060699.1| Os07g0688100 [Oryza sativa Japonica Group] g...    98   1e-18
ref|XP_006658163.1| PREDICTED: pentatricopeptide repeat-containi...    98   1e-18
gb|EEC82719.1| hypothetical protein OsI_27404 [Oryza sativa Indi...    96   5e-18
ref|XP_006836595.1| hypothetical protein AMTR_s00131p00098210 [A...    95   1e-17
ref|XP_004967498.1| PREDICTED: pentatricopeptide repeat-containi...    93   4e-17
ref|XP_002530052.1| pentatricopeptide repeat-containing protein,...    56   4e-06
ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containi...    56   6e-06
tpg|DAA47714.1| TPA: hypothetical protein ZEAMMB73_516901 [Zea m...    55   1e-05

>ref|XP_002461240.1| hypothetical protein SORBIDRAFT_02g043430 [Sorghum bicolor]
           gi|241924617|gb|EER97761.1| hypothetical protein
           SORBIDRAFT_02g043430 [Sorghum bicolor]
          Length = 551

 Score =  103 bits (256), Expect = 3e-20
 Identities = 45/93 (48%), Positives = 65/93 (69%)
 Frame = -1

Query: 280 FYKWAECQPDFRHDHFTFKTLVSLLLEDQNFGILSEVLKGISGNEITVHRSVYRIIISGF 101
           FY WAE +P F H  F    +VSLL  D NF +LSE L+ +    +T+HRS+YRI++SG+
Sbjct: 114 FYWWAESRPGFDHTQFAIAYIVSLLFIDSNFFLLSEFLERVRSQGVTLHRSLYRILLSGY 173

Query: 100 IRSGQINLAIRTFEAMFESGCRMFSIDFNKFIG 2
           +R+G+ +  I+TF+ M  SGCR F +D+N+FIG
Sbjct: 174 VRAGKFDSVIQTFDEMVTSGCREFGVDYNRFIG 206


>gb|EMT06436.1| hypothetical protein F775_22799 [Aegilops tauschii]
          Length = 807

 Score =  101 bits (252), Expect = 9e-20
 Identities = 44/93 (47%), Positives = 63/93 (67%)
 Frame = -1

Query: 280 FYKWAECQPDFRHDHFTFKTLVSLLLEDQNFGILSEVLKGISGNEITVHRSVYRIIISGF 101
           FY WAE +P F H  F    +VSLL  D+NF +LSE L  +    + +HRS+YRI++SG+
Sbjct: 253 FYLWAESRPGFDHSQFAIAYIVSLLFVDENFALLSEFLGTVRSQGVALHRSLYRILLSGY 312

Query: 100 IRSGQINLAIRTFEAMFESGCRMFSIDFNKFIG 2
           +R+G+ +  I TF+ M  SGCR F ID+N++IG
Sbjct: 313 VRAGKFDSVIETFDEMVMSGCREFGIDYNRYIG 345


>tpg|DAA64189.1| TPA: hypothetical protein ZEAMMB73_647521 [Zea mays]
          Length = 667

 Score =  100 bits (250), Expect = 2e-19
 Identities = 44/93 (47%), Positives = 63/93 (67%)
 Frame = -1

Query: 280 FYKWAECQPDFRHDHFTFKTLVSLLLEDQNFGILSEVLKGISGNEITVHRSVYRIIISGF 101
           FY WAE +P F H  F    +VSLL  D NF +LSE L+ +    + +HRS+YRI++SG+
Sbjct: 112 FYWWAESRPGFDHTQFAIAYVVSLLFVDSNFFLLSEFLERVRSQGVALHRSLYRILLSGY 171

Query: 100 IRSGQINLAIRTFEAMFESGCRMFSIDFNKFIG 2
           +R+G+ +  I TF+ M  SGCR F +D+N+FIG
Sbjct: 172 VRAGKFDSVIHTFDEMVTSGCREFGVDYNRFIG 204


>ref|XP_003562422.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Brachypodium distachyon]
          Length = 663

 Score =  100 bits (249), Expect = 2e-19
 Identities = 44/93 (47%), Positives = 62/93 (66%)
 Frame = -1

Query: 280 FYKWAECQPDFRHDHFTFKTLVSLLLEDQNFGILSEVLKGISGNEITVHRSVYRIIISGF 101
           FY WAE +P F H  F    LVSLL  D NF +LSE L  +    + +HRS+YRI++SG+
Sbjct: 109 FYWWAESRPGFDHSQFAIAYLVSLLFMDGNFALLSEFLGRVKSQGVALHRSLYRILLSGY 168

Query: 100 IRSGQINLAIRTFEAMFESGCRMFSIDFNKFIG 2
           +R+G+ +  I TF+ M  SGCR F +D+N++IG
Sbjct: 169 VRAGKFDSVIETFDEMVMSGCREFGVDYNRYIG 201


>dbj|BAK04970.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 660

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 44/93 (47%), Positives = 62/93 (66%)
 Frame = -1

Query: 280 FYKWAECQPDFRHDHFTFKTLVSLLLEDQNFGILSEVLKGISGNEITVHRSVYRIIISGF 101
           FY WAE +P F H  F    +VSLL  D NF +LSE L  +    + +HRS+YRI++SG+
Sbjct: 106 FYWWAESRPGFDHSQFAIAYIVSLLFVDGNFALLSEFLGTVRSQGVALHRSLYRILLSGY 165

Query: 100 IRSGQINLAIRTFEAMFESGCRMFSIDFNKFIG 2
           +R+G+ +  I TF+ M  SGCR F ID+N++IG
Sbjct: 166 VRAGKFDSVIGTFDEMVMSGCREFGIDYNRYIG 198


>ref|NP_001060699.1| Os07g0688100 [Oryza sativa Japonica Group]
           gi|33146488|dbj|BAC79597.1| membrane-associated
           salt-inducible protein-like [Oryza sativa Japonica
           Group] gi|50509161|dbj|BAD30301.1| membrane-associated
           salt-inducible protein-like [Oryza sativa Japonica
           Group] gi|113612235|dbj|BAF22613.1| Os07g0688100 [Oryza
           sativa Japonica Group] gi|215678726|dbj|BAG95163.1|
           unnamed protein product [Oryza sativa Japonica Group]
           gi|222637719|gb|EEE67851.1| hypothetical protein
           OsJ_25651 [Oryza sativa Japonica Group]
          Length = 665

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 41/93 (44%), Positives = 62/93 (66%)
 Frame = -1

Query: 280 FYKWAECQPDFRHDHFTFKTLVSLLLEDQNFGILSEVLKGISGNEITVHRSVYRIIISGF 101
           FY WAE +P F H++F    ++SLL  D NF +LSE L  +    +  HRS+YR++++G+
Sbjct: 111 FYWWAESRPGFYHNNFAIAYIISLLFVDDNFALLSEFLGRVRSQGVAFHRSLYRVLLAGY 170

Query: 100 IRSGQINLAIRTFEAMFESGCRMFSIDFNKFIG 2
            R+G+ +  I TF+ M  SGCR F +D+N+FIG
Sbjct: 171 ARAGKFDSVIETFDEMVTSGCREFGVDYNRFIG 203


>ref|XP_006658163.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Oryza brachyantha]
          Length = 664

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 41/93 (44%), Positives = 61/93 (65%)
 Frame = -1

Query: 280 FYKWAECQPDFRHDHFTFKTLVSLLLEDQNFGILSEVLKGISGNEITVHRSVYRIIISGF 101
           FY WAE +P F H++F    ++SLL  D NF +LSE L  +    + +HRS+YR+++ G+
Sbjct: 109 FYWWAESRPGFYHNNFAIAYIISLLFVDDNFALLSEFLGSVRSQGVALHRSLYRVLLGGY 168

Query: 100 IRSGQINLAIRTFEAMFESGCRMFSIDFNKFIG 2
            R+G+    I TF+ M  SGCR F +D+N+FIG
Sbjct: 169 ARAGKFYSVIETFDDMVTSGCREFGVDYNRFIG 201


>gb|EEC82719.1| hypothetical protein OsI_27404 [Oryza sativa Indica Group]
          Length = 665

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 40/93 (43%), Positives = 61/93 (65%)
 Frame = -1

Query: 280 FYKWAECQPDFRHDHFTFKTLVSLLLEDQNFGILSEVLKGISGNEITVHRSVYRIIISGF 101
           FY WAE +P F H++F    ++SLL  D NF +L E L  +    +  HRS+YR++++G+
Sbjct: 111 FYWWAESRPGFYHNNFAIAYIISLLFVDDNFALLLEFLGRVRSQGVAFHRSLYRVLLAGY 170

Query: 100 IRSGQINLAIRTFEAMFESGCRMFSIDFNKFIG 2
            R+G+ +  I TF+ M  SGCR F +D+N+FIG
Sbjct: 171 ARAGKFDSVIETFDEMVTSGCREFGVDYNRFIG 203


>ref|XP_006836595.1| hypothetical protein AMTR_s00131p00098210 [Amborella trichopoda]
           gi|548839134|gb|ERM99448.1| hypothetical protein
           AMTR_s00131p00098210 [Amborella trichopoda]
          Length = 704

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 41/93 (44%), Positives = 68/93 (73%)
 Frame = -1

Query: 280 FYKWAECQPDFRHDHFTFKTLVSLLLEDQNFGILSEVLKGISGNEITVHRSVYRIIISGF 101
           F+ WAE QP F+HD+FT+ +++SLLL+D+ F +++ V + +      +H ++YR++ISGF
Sbjct: 124 FFCWAERQPGFKHDYFTYTSILSLLLKDRRFELVAVVREKMRETGFVMHATIYRLLISGF 183

Query: 100 IRSGQINLAIRTFEAMFESGCRMFSIDFNKFIG 2
           +++  I LAI TF+ M ES C +FS D+++FIG
Sbjct: 184 VKAELIGLAINTFDEMLESKCVVFSRDYSRFIG 216


>ref|XP_004967498.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Setaria italica]
          Length = 662

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 40/93 (43%), Positives = 62/93 (66%)
 Frame = -1

Query: 280 FYKWAECQPDFRHDHFTFKTLVSLLLEDQNFGILSEVLKGISGNEITVHRSVYRIIISGF 101
           FY WAE +P F H       ++SLL  D +F +LSE L+ +    + +HRS+YRI++S +
Sbjct: 108 FYWWAESRPGFDHTQSAIAYILSLLFIDGDFSLLSEFLERVRSQGVALHRSLYRILLSNY 167

Query: 100 IRSGQINLAIRTFEAMFESGCRMFSIDFNKFIG 2
           +R+G+ +  I+TF+ M  SGCR F +D+N+FIG
Sbjct: 168 VRAGKFDSVIQTFDDMVTSGCREFGVDYNRFIG 200


>ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530468|gb|EEF32352.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 554

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 22/45 (48%), Positives = 36/45 (80%)
 Frame = -1

Query: 136 HRSVYRIIISGFIRSGQINLAIRTFEAMFESGCRMFSIDFNKFIG 2
           HR +YR  I+G++++G I+ A++ F+ M +S CR+FSID+N+FIG
Sbjct: 8   HRLIYRSRIAGYVKAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIG 52


>ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Vitis vinifera]
           gi|296081374|emb|CBI16807.3| unnamed protein product
           [Vitis vinifera]
          Length = 519

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 23/45 (51%), Positives = 35/45 (77%)
 Frame = -1

Query: 136 HRSVYRIIISGFIRSGQINLAIRTFEAMFESGCRMFSIDFNKFIG 2
           HR  YR  IS ++++G I+ A++TF+ M +S CR+FSID+N+FIG
Sbjct: 8   HRLAYRAQISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIG 52


>tpg|DAA47714.1| TPA: hypothetical protein ZEAMMB73_516901 [Zea mays]
          Length = 853

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 26/80 (32%), Positives = 45/80 (56%)
 Frame = -1

Query: 280 FYKWAECQPDFRHDHFTFKTLVSLLLEDQNFGILSEVLKGISGNEITVHRSVYRIIISGF 101
           F++W + QP F+HD  T+ T++ +L + + FG+L E+L  +S          Y  II  +
Sbjct: 346 FFQWLKRQPGFKHDGHTYTTMIGILGQARQFGVLKELLDEMSRAHCKPTVVTYNRIIHAY 405

Query: 100 IRSGQINLAIRTFEAMFESG 41
            R+  +  A++ FE M E+G
Sbjct: 406 GRANYLKEAVKVFEEMQEAG 425


Top