BLASTX nr result
ID: Zingiber23_contig00038040
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00038040
(243 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EEE52248.1| hypothetical protein OsJ_34191 [Oryza sativa Japo... 90 4e-16
gb|EEC68325.1| hypothetical protein OsI_36421 [Oryza sativa Indi... 90 4e-16
ref|XP_004979430.1| PREDICTED: E3 ubiquitin-protein ligase HERC2... 89 8e-16
gb|AFW64904.1| putative regulator of chromosome condensation (RC... 89 8e-16
gb|AFW64902.1| putative regulator of chromosome condensation (RC... 89 8e-16
gb|AFW64901.1| putative regulator of chromosome condensation (RC... 89 8e-16
ref|NP_001132850.1| uncharacterized protein LOC100194342 [Zea ma... 89 8e-16
ref|XP_002450904.1| hypothetical protein SORBIDRAFT_05g020900 [S... 88 1e-15
ref|XP_003577490.1| PREDICTED: probable E3 ubiquitin-protein lig... 88 1e-15
dbj|BAJ84921.1| predicted protein [Hordeum vulgare subsp. vulgare] 87 3e-15
ref|XP_002273073.1| PREDICTED: E3 ubiquitin-protein ligase HERC2... 86 5e-15
ref|XP_003523201.1| PREDICTED: ultraviolet-B receptor UVR8-like ... 82 7e-14
ref|XP_004163263.1| PREDICTED: probable E3 ubiquitin-protein lig... 79 5e-13
ref|XP_004144697.1| PREDICTED: probable E3 ubiquitin-protein lig... 79 5e-13
ref|XP_006491924.1| PREDICTED: probable E3 ubiquitin-protein lig... 79 6e-13
ref|XP_006491923.1| PREDICTED: probable E3 ubiquitin-protein lig... 79 6e-13
ref|XP_006491915.1| PREDICTED: probable E3 ubiquitin-protein lig... 79 6e-13
gb|EOX92735.1| Regulator of chromosome condensation family prote... 79 6e-13
gb|EOX92734.1| Regulator of chromosome condensation (RCC1) famil... 79 6e-13
gb|EOX92733.1| Regulator of chromosome condensation (RCC1) famil... 79 6e-13
>gb|EEE52248.1| hypothetical protein OsJ_34191 [Oryza sativa Japonica Group]
Length = 425
Score = 89.7 bits (221), Expect = 4e-16
Identities = 49/92 (53%), Positives = 55/92 (59%), Gaps = 12/92 (13%)
Frame = -3
Query: 241 SRRLSGEAP----RRFAALWXXXXXXXXXXXXXGSRFKPTVCPFF--------DSDPPVS 98
+R LS P RR AALW SR+ PT CPFF D DPP S
Sbjct: 18 ARMLSSGEPAAGRRRVAALWGNGDYGRLGMGALESRWSPTACPFFLTGRPGDDDDDPPAS 77
Query: 97 IACGGAHTLFLTESGRVYASGLNNFGQLGRSS 2
+ACGGAHTLFLTESGRV+A+GLN+FGQLG S
Sbjct: 78 LACGGAHTLFLTESGRVFAAGLNDFGQLGIGS 109
>gb|EEC68325.1| hypothetical protein OsI_36421 [Oryza sativa Indica Group]
Length = 425
Score = 89.7 bits (221), Expect = 4e-16
Identities = 49/92 (53%), Positives = 55/92 (59%), Gaps = 12/92 (13%)
Frame = -3
Query: 241 SRRLSGEAP----RRFAALWXXXXXXXXXXXXXGSRFKPTVCPFF--------DSDPPVS 98
+R LS P RR AALW SR+ PT CPFF D DPP S
Sbjct: 18 ARMLSSGEPAAGRRRVAALWGNGDYGRLGMGALESRWSPTACPFFLTGRPGDDDDDPPAS 77
Query: 97 IACGGAHTLFLTESGRVYASGLNNFGQLGRSS 2
+ACGGAHTLFLTESGRV+A+GLN+FGQLG S
Sbjct: 78 LACGGAHTLFLTESGRVFAAGLNDFGQLGIGS 109
>ref|XP_004979430.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform X1
[Setaria italica]
Length = 416
Score = 88.6 bits (218), Expect = 8e-16
Identities = 47/80 (58%), Positives = 53/80 (66%), Gaps = 4/80 (5%)
Frame = -3
Query: 229 SGEAPR-RFAALWXXXXXXXXXXXXXGSRFKPTVCPFFDS---DPPVSIACGGAHTLFLT 62
S APR R AALW SR+ PT CPFF S DPP S+ACGGAHTLFLT
Sbjct: 21 SSRAPRQRVAALWGNGDYGRLGLGALESRWSPTACPFFLSRAADPPASLACGGAHTLFLT 80
Query: 61 ESGRVYASGLNNFGQLGRSS 2
+SGRV+A+GLN+FGQLG S
Sbjct: 81 QSGRVFATGLNDFGQLGIGS 100
>gb|AFW64904.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 263
Score = 88.6 bits (218), Expect = 8e-16
Identities = 45/77 (58%), Positives = 54/77 (70%), Gaps = 4/77 (5%)
Frame = -3
Query: 229 SGEAPR-RFAALWXXXXXXXXXXXXXGSRFKPTVCPFF---DSDPPVSIACGGAHTLFLT 62
S +APR R AALW SR+ PTVCPFF +DPP S+ACGGAHTLFLT
Sbjct: 21 SSKAPRQRVAALWGNGDYGRLGLGSLESRWSPTVCPFFLARAADPPASLACGGAHTLFLT 80
Query: 61 ESGRVYASGLNNFGQLG 11
++GRV+A+GLN+FGQLG
Sbjct: 81 QNGRVFATGLNDFGQLG 97
>gb|AFW64902.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 261
Score = 88.6 bits (218), Expect = 8e-16
Identities = 45/77 (58%), Positives = 54/77 (70%), Gaps = 4/77 (5%)
Frame = -3
Query: 229 SGEAPR-RFAALWXXXXXXXXXXXXXGSRFKPTVCPFF---DSDPPVSIACGGAHTLFLT 62
S +APR R AALW SR+ PTVCPFF +DPP S+ACGGAHTLFLT
Sbjct: 21 SSKAPRQRVAALWGNGDYGRLGLGSLESRWSPTVCPFFLARAADPPASLACGGAHTLFLT 80
Query: 61 ESGRVYASGLNNFGQLG 11
++GRV+A+GLN+FGQLG
Sbjct: 81 QNGRVFATGLNDFGQLG 97
>gb|AFW64901.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 263
Score = 88.6 bits (218), Expect = 8e-16
Identities = 45/77 (58%), Positives = 54/77 (70%), Gaps = 4/77 (5%)
Frame = -3
Query: 229 SGEAPR-RFAALWXXXXXXXXXXXXXGSRFKPTVCPFF---DSDPPVSIACGGAHTLFLT 62
S +APR R AALW SR+ PTVCPFF +DPP S+ACGGAHTLFLT
Sbjct: 21 SSKAPRQRVAALWGNGDYGRLGLGSLESRWSPTVCPFFLARAADPPASLACGGAHTLFLT 80
Query: 61 ESGRVYASGLNNFGQLG 11
++GRV+A+GLN+FGQLG
Sbjct: 81 QNGRVFATGLNDFGQLG 97
>ref|NP_001132850.1| uncharacterized protein LOC100194342 [Zea mays]
gi|194695574|gb|ACF81871.1| unknown [Zea mays]
gi|413924971|gb|AFW64903.1| putative regulator of
chromosome condensation (RCC1) family protein [Zea mays]
Length = 418
Score = 88.6 bits (218), Expect = 8e-16
Identities = 45/77 (58%), Positives = 54/77 (70%), Gaps = 4/77 (5%)
Frame = -3
Query: 229 SGEAPR-RFAALWXXXXXXXXXXXXXGSRFKPTVCPFF---DSDPPVSIACGGAHTLFLT 62
S +APR R AALW SR+ PTVCPFF +DPP S+ACGGAHTLFLT
Sbjct: 21 SSKAPRQRVAALWGNGDYGRLGLGSLESRWSPTVCPFFLARAADPPASLACGGAHTLFLT 80
Query: 61 ESGRVYASGLNNFGQLG 11
++GRV+A+GLN+FGQLG
Sbjct: 81 QNGRVFATGLNDFGQLG 97
>ref|XP_002450904.1| hypothetical protein SORBIDRAFT_05g020900 [Sorghum bicolor]
gi|241936747|gb|EES09892.1| hypothetical protein
SORBIDRAFT_05g020900 [Sorghum bicolor]
Length = 418
Score = 88.2 bits (217), Expect = 1e-15
Identities = 47/81 (58%), Positives = 54/81 (66%), Gaps = 5/81 (6%)
Frame = -3
Query: 229 SGEAPRR--FAALWXXXXXXXXXXXXXGSRFKPTVCPFF---DSDPPVSIACGGAHTLFL 65
S APRR AALW SR+ PTVCPFF +DPP S+ACGGAHTLFL
Sbjct: 22 SKAAPRRQRVAALWGNGDYGRLGLGVLESRWSPTVCPFFLARAADPPASLACGGAHTLFL 81
Query: 64 TESGRVYASGLNNFGQLGRSS 2
T+SGRV+A+GLN+FGQLG S
Sbjct: 82 TQSGRVFATGLNDFGQLGVGS 102
>ref|XP_003577490.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Brachypodium distachyon]
Length = 422
Score = 87.8 bits (216), Expect = 1e-15
Identities = 47/80 (58%), Positives = 53/80 (66%), Gaps = 4/80 (5%)
Frame = -3
Query: 229 SGE-APRRFAALWXXXXXXXXXXXXXGSRFKPTVCPFF---DSDPPVSIACGGAHTLFLT 62
SGE A RR AALW SR+ PT CPFF DPP S+ACGGAHTLFLT
Sbjct: 27 SGEPAWRRVAALWGNGDYGRLGLGALESRWNPTACPFFLARAGDPPASLACGGAHTLFLT 86
Query: 61 ESGRVYASGLNNFGQLGRSS 2
+SGRV+A+GLN+FGQLG S
Sbjct: 87 QSGRVFATGLNDFGQLGIGS 106
>dbj|BAJ84921.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 419
Score = 86.7 bits (213), Expect = 3e-15
Identities = 43/76 (56%), Positives = 50/76 (65%), Gaps = 3/76 (3%)
Frame = -3
Query: 220 APRRFAALWXXXXXXXXXXXXXGSRFKPTVCPFF---DSDPPVSIACGGAHTLFLTESGR 50
A RR AALW SR+ PT CPFF +DPP S++CGGAHTLFLTE GR
Sbjct: 28 ARRRVAALWGNGDHGRLGLGALESRWSPTACPFFLARPADPPASLSCGGAHTLFLTEGGR 87
Query: 49 VYASGLNNFGQLGRSS 2
V+A+GLN+FGQLG S
Sbjct: 88 VFATGLNDFGQLGIGS 103
>ref|XP_002273073.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
gi|296082630|emb|CBI21635.3| unnamed protein product
[Vitis vinifera]
Length = 420
Score = 85.9 bits (211), Expect = 5e-15
Identities = 46/79 (58%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Frame = -3
Query: 238 RRLSGEAPR-RFAALWXXXXXXXXXXXXXGSRFKPTVCPFFDSDPPVSIACGGAHTLFLT 62
RRLS PR RFAALW S+++P VC FD V+IACGGAHTLFLT
Sbjct: 23 RRLSSSEPRKRFAALWGNGDFGRLGLGSLESQWRPAVCSAFDHHSLVAIACGGAHTLFLT 82
Query: 61 ESGRVYASGLNNFGQLGRS 5
ESG VYA+GLN+FGQLG S
Sbjct: 83 ESGCVYAAGLNDFGQLGVS 101
>ref|XP_003523201.1| PREDICTED: ultraviolet-B receptor UVR8-like [Glycine max]
Length = 417
Score = 82.0 bits (201), Expect = 7e-14
Identities = 42/79 (53%), Positives = 51/79 (64%)
Frame = -3
Query: 241 SRRLSGEAPRRFAALWXXXXXXXXXXXXXGSRFKPTVCPFFDSDPPVSIACGGAHTLFLT 62
+R S +A +RFAALW S++KP VCP F + +IACGGAHTLFLT
Sbjct: 22 TRSFSRDAGKRFAALWGNGDYGRLGLGNLDSQWKPVVCPAFRNKTLNAIACGGAHTLFLT 81
Query: 61 ESGRVYASGLNNFGQLGRS 5
E G VYA+GLN+FGQLG S
Sbjct: 82 EDGCVYATGLNDFGQLGVS 100
>ref|XP_004163263.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
[Cucumis sativus]
Length = 386
Score = 79.3 bits (194), Expect = 5e-13
Identities = 39/79 (49%), Positives = 49/79 (62%)
Frame = -3
Query: 241 SRRLSGEAPRRFAALWXXXXXXXXXXXXXGSRFKPTVCPFFDSDPPVSIACGGAHTLFLT 62
+R + ++ +RF A+W S++ P C FD + IACGGAHTLFLT
Sbjct: 70 TRWFASDSGKRFGAVWGNGDFGRLGLGNLDSQWSPVPCSSFDREMLKGIACGGAHTLFLT 129
Query: 61 ESGRVYASGLNNFGQLGRS 5
ESGRVYA+GLNNFGQLG S
Sbjct: 130 ESGRVYATGLNNFGQLGIS 148
>ref|XP_004144697.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cucumis
sativus]
Length = 481
Score = 79.3 bits (194), Expect = 5e-13
Identities = 39/79 (49%), Positives = 49/79 (62%)
Frame = -3
Query: 241 SRRLSGEAPRRFAALWXXXXXXXXXXXXXGSRFKPTVCPFFDSDPPVSIACGGAHTLFLT 62
+R + ++ +RF A+W S++ P C FD + IACGGAHTLFLT
Sbjct: 87 TRWFASDSGKRFGAVWGNGDFGRLGLGNLDSQWSPVPCSSFDREMLKGIACGGAHTLFLT 146
Query: 61 ESGRVYASGLNNFGQLGRS 5
ESGRVYA+GLNNFGQLG S
Sbjct: 147 ESGRVYATGLNNFGQLGIS 165
>ref|XP_006491924.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
X10 [Citrus sinensis]
Length = 423
Score = 79.0 bits (193), Expect = 6e-13
Identities = 39/78 (50%), Positives = 49/78 (62%)
Frame = -3
Query: 238 RRLSGEAPRRFAALWXXXXXXXXXXXXXGSRFKPTVCPFFDSDPPVSIACGGAHTLFLTE 59
R +S RRFAALW SR++P VC F+ ++ACGGAHTLFLTE
Sbjct: 29 RWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE 88
Query: 58 SGRVYASGLNNFGQLGRS 5
+G +YA+GLN+FGQLG S
Sbjct: 89 TGCIYATGLNDFGQLGIS 106
>ref|XP_006491923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
X9 [Citrus sinensis]
Length = 430
Score = 79.0 bits (193), Expect = 6e-13
Identities = 39/78 (50%), Positives = 49/78 (62%)
Frame = -3
Query: 238 RRLSGEAPRRFAALWXXXXXXXXXXXXXGSRFKPTVCPFFDSDPPVSIACGGAHTLFLTE 59
R +S RRFAALW SR++P VC F+ ++ACGGAHTLFLTE
Sbjct: 29 RWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE 88
Query: 58 SGRVYASGLNNFGQLGRS 5
+G +YA+GLN+FGQLG S
Sbjct: 89 TGCIYATGLNDFGQLGIS 106
>ref|XP_006491915.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
X1 [Citrus sinensis] gi|568877820|ref|XP_006491916.1|
PREDICTED: probable E3 ubiquitin-protein ligase
HERC4-like isoform X2 [Citrus sinensis]
gi|568877822|ref|XP_006491917.1| PREDICTED: probable E3
ubiquitin-protein ligase HERC4-like isoform X3 [Citrus
sinensis] gi|568877824|ref|XP_006491918.1| PREDICTED:
probable E3 ubiquitin-protein ligase HERC4-like isoform
X4 [Citrus sinensis] gi|568877826|ref|XP_006491919.1|
PREDICTED: probable E3 ubiquitin-protein ligase
HERC4-like isoform X5 [Citrus sinensis]
gi|568877828|ref|XP_006491920.1| PREDICTED: probable E3
ubiquitin-protein ligase HERC4-like isoform X6 [Citrus
sinensis] gi|568877830|ref|XP_006491921.1| PREDICTED:
probable E3 ubiquitin-protein ligase HERC4-like isoform
X7 [Citrus sinensis] gi|568877832|ref|XP_006491922.1|
PREDICTED: probable E3 ubiquitin-protein ligase
HERC4-like isoform X8 [Citrus sinensis]
Length = 454
Score = 79.0 bits (193), Expect = 6e-13
Identities = 39/78 (50%), Positives = 49/78 (62%)
Frame = -3
Query: 238 RRLSGEAPRRFAALWXXXXXXXXXXXXXGSRFKPTVCPFFDSDPPVSIACGGAHTLFLTE 59
R +S RRFAALW SR++P VC F+ ++ACGGAHTLFLTE
Sbjct: 29 RWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE 88
Query: 58 SGRVYASGLNNFGQLGRS 5
+G +YA+GLN+FGQLG S
Sbjct: 89 TGCIYATGLNDFGQLGIS 106
>gb|EOX92735.1| Regulator of chromosome condensation family protein isoform 3
[Theobroma cacao]
Length = 326
Score = 79.0 bits (193), Expect = 6e-13
Identities = 42/77 (54%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Frame = -3
Query: 229 SGEAPRRFAALWXXXXXXXXXXXXXGSRF--KPTVCPFFDSDPPVSIACGGAHTLFLTES 56
SGE RRFAA+W S++ KP C F S+ACGGAHTLFLTES
Sbjct: 30 SGEPARRFAAVWGNGDYGRLGVGTLDSQWRPKPIHCSSFQDQSLKSVACGGAHTLFLTES 89
Query: 55 GRVYASGLNNFGQLGRS 5
GRVYA+GLN+FGQLG S
Sbjct: 90 GRVYATGLNDFGQLGSS 106
>gb|EOX92734.1| Regulator of chromosome condensation (RCC1) family protein isoform
2 [Theobroma cacao]
Length = 423
Score = 79.0 bits (193), Expect = 6e-13
Identities = 42/77 (54%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Frame = -3
Query: 229 SGEAPRRFAALWXXXXXXXXXXXXXGSRF--KPTVCPFFDSDPPVSIACGGAHTLFLTES 56
SGE RRFAA+W S++ KP C F S+ACGGAHTLFLTES
Sbjct: 30 SGEPARRFAAVWGNGDYGRLGVGTLDSQWRPKPIHCSSFQDQSLKSVACGGAHTLFLTES 89
Query: 55 GRVYASGLNNFGQLGRS 5
GRVYA+GLN+FGQLG S
Sbjct: 90 GRVYATGLNDFGQLGSS 106
>gb|EOX92733.1| Regulator of chromosome condensation (RCC1) family protein isoform
1 [Theobroma cacao]
Length = 426
Score = 79.0 bits (193), Expect = 6e-13
Identities = 42/77 (54%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Frame = -3
Query: 229 SGEAPRRFAALWXXXXXXXXXXXXXGSRF--KPTVCPFFDSDPPVSIACGGAHTLFLTES 56
SGE RRFAA+W S++ KP C F S+ACGGAHTLFLTES
Sbjct: 30 SGEPARRFAAVWGNGDYGRLGVGTLDSQWRPKPIHCSSFQDQSLKSVACGGAHTLFLTES 89
Query: 55 GRVYASGLNNFGQLGRS 5
GRVYA+GLN+FGQLG S
Sbjct: 90 GRVYATGLNDFGQLGSS 106