BLASTX nr result

ID: Zingiber23_contig00035486 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00035486
         (1638 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004963261.1| PREDICTED: uncharacterized protein LOC101761...    70   3e-09
ref|NP_001177071.1| Os12g0628200 [Oryza sativa Japonica Group] g...    60   4e-06

>ref|XP_004963261.1| PREDICTED: uncharacterized protein LOC101761204 [Setaria italica]
          Length = 358

 Score = 69.7 bits (169), Expect = 3e-09
 Identities = 65/188 (34%), Positives = 78/188 (41%), Gaps = 3/188 (1%)
 Frame = +3

Query: 54  PRKKPPQAAAGGGSGVSRIVSCLRPDXXXXXXXXSLVVQTGFPTSLADLFLKNRSRLKVP 233
           P    P      G  + R+++ LRP          L VQTGFPTSLADL +KN  RLK P
Sbjct: 2   PTTTSPLKRPSAGGRLRRLLASLRPPARAGP----LPVQTGFPTSLADLVVKNHGRLKKP 57

Query: 234 SRKKRK-KLPETTXXXXXXXXXXXXXXXXXXXXWGNADAVSAVRQKDTGFGIASGTLLIV 410
            R+ R    P                        G   A    R K  GF +    LL V
Sbjct: 58  RRRHRAIPAPPPVAASAAELAPQQRRDLSAAQQDGAVPAPPPSRPKGAGFTVRP-ELLAV 116

Query: 411 AGVM--LALAIERNKLVGGIMLFAVVLWLLDSLGFRHLRSRTPRSDASSTASGRWNLQGR 584
            GVM    L I   +LV    L +V L+ ++S  FR   SR  R     T     + QGR
Sbjct: 117 GGVMALALLVIWSKRLVAAATLASVALFWIES--FRSPASR--RRPRPETTEEELDSQGR 172

Query: 585 GFVSPIRE 608
           G VSPIRE
Sbjct: 173 GLVSPIRE 180


>ref|NP_001177071.1| Os12g0628200 [Oryza sativa Japonica Group]
           gi|77556721|gb|ABA99517.1| expressed protein [Oryza
           sativa Japonica Group] gi|125580152|gb|EAZ21298.1|
           hypothetical protein OsJ_36951 [Oryza sativa Japonica
           Group] gi|215734856|dbj|BAG95578.1| unnamed protein
           product [Oryza sativa Japonica Group]
           gi|255670501|dbj|BAH95799.1| Os12g0628200 [Oryza sativa
           Japonica Group]
          Length = 328

 Score = 59.7 bits (143), Expect = 4e-06
 Identities = 54/176 (30%), Positives = 81/176 (46%), Gaps = 6/176 (3%)
 Frame = +3

Query: 99  VSRIVSCLRPDXXXXXXXXSLVVQTGFPTSLADLFLKNRSRLKV--PSRKKRKKLPETTX 272
           + R+++ LRP          L VQTGFPTSLADL +KN  RL +  P R++R   P TT 
Sbjct: 13  LGRLLASLRPPSRAGP----LPVQTGFPTSLADLLVKNHDRLLLTKPRRRRRPTPPTTTT 68

Query: 273 XXXXXXXXXXXXXXXXXXXWGNADAVS--AVRQKDTGFGIASGTLLIVAGVMLALAIERN 446
                                  + V   AVR +    G+ +      A  +  + I   
Sbjct: 69  ATASVAAADVETPLPSGREELEEEKVGGVAVRLRPELLGVGA------AAALALMVIWSR 122

Query: 447 KLVGGIMLFAVVLWLLDSL--GFRHLRSRTPRSDASSTASGRWNLQGRGFVSPIRE 608
            LV  + + ++ L+ ++S+      LR R   + A+ TA+   +L+GRG VSPIRE
Sbjct: 123 WLVAAVTVASLSLFWIESVRSSSSRLRPRPRSTPAAETAAELPDLRGRGVVSPIRE 178


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