BLASTX nr result

ID: Zingiber23_contig00035424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00035424
         (302 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006658805.1| PREDICTED: exportin-T-like, partial [Oryza b...    57   2e-06
ref|XP_003562704.1| PREDICTED: exportin-T-like [Brachypodium dis...    56   6e-06
ref|XP_006342920.1| PREDICTED: exportin-T-like isoform X2 [Solan...    55   7e-06

>ref|XP_006658805.1| PREDICTED: exportin-T-like, partial [Oryza brachyantha]
          Length = 945

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/35 (74%), Positives = 30/35 (85%)
 Frame = +3

Query: 3    YYEKLQTDDLKAMKSFYHLLIENLRQQQNGSLVFR 107
            YY+KLQ +D+KA KSFY  LIE +RQQQNGSLVFR
Sbjct: 911  YYQKLQGNDIKAFKSFYQTLIEKIRQQQNGSLVFR 945


>ref|XP_003562704.1| PREDICTED: exportin-T-like [Brachypodium distachyon]
          Length = 980

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/35 (71%), Positives = 30/35 (85%)
 Frame = +3

Query: 3    YYEKLQTDDLKAMKSFYHLLIENLRQQQNGSLVFR 107
            YY+KLQ +D+KA +SFY  LIE +RQQQNGSLVFR
Sbjct: 946  YYQKLQGNDIKAFRSFYQSLIEKIRQQQNGSLVFR 980


>ref|XP_006342920.1| PREDICTED: exportin-T-like isoform X2 [Solanum tuberosum]
          Length = 989

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 26/35 (74%), Positives = 30/35 (85%)
 Frame = +3

Query: 3    YYEKLQTDDLKAMKSFYHLLIENLRQQQNGSLVFR 107
            Y +KLQ  D+KA+KSFY  LIENLR+QQNGSLVFR
Sbjct: 955  YCQKLQGSDIKALKSFYQSLIENLRRQQNGSLVFR 989


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