BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00035300
         (2111 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE56320.1| hypothetical protein OsJ_05410 [Oryza sativa Japo...   791   0.0  
gb|EEC72510.1| hypothetical protein OsI_05888 [Oryza sativa Indi...   791   0.0  
ref|XP_006646896.1| PREDICTED: DNA-directed RNA polymerase V sub...   781   0.0  
ref|XP_004951807.1| PREDICTED: DNA-directed RNA polymerase E sub...   771   0.0  
ref|XP_003577164.1| PREDICTED: DNA-directed RNA polymerase E sub...   754   0.0  
gb|EMT23234.1| DNA-directed RNA polymerase II subunit RPB1-B [Ae...   737   0.0  
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub...   736   0.0  
ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   729   0.0  
ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub...   729   0.0  
ref|XP_002513060.1| DNA-directed RNA polymerase, putative [Ricin...   726   0.0  
ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Popu...   725   0.0  
ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citr...   718   0.0  
gb|EOY19811.1| DNA-directed RNA polymerase E subunit 1, putative...   715   0.0  
gb|EOY19809.1| DNA-directed RNA polymerase E subunit 1, putative...   715   0.0  
ref|NP_001045921.1| Os02g0152800 [Oryza sativa Japonica Group] g...   710   0.0  
ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V sub...   709   0.0  
ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V sub...   708   0.0  
ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   707   0.0  
ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V sub...   704   0.0  
gb|EPS67715.1| hypothetical protein M569_07058, partial [Genlise...   702   0.0  

>gb|EEE56320.1| hypothetical protein OsJ_05410 [Oryza sativa Japonica Group]
          Length = 2017

 Score =  791 bits (2043), Expect = 0.0
 Identities = 387/590 (65%), Positives = 472/590 (80%), Gaps = 3/590 (0%)
 Frame = +3

Query: 339  MENKLSSPLVLDGSVCNIKFSISTTEEIMTYSINECPISHPSQLANPFLGLPLESGRCES 518
            ME   S+  V +G++ +IK S+ST +EI TYSIN+CP++HPSQL NPFLGLPLE+G+CES
Sbjct: 1    MEEDQSAIPVAEGAIKSIKLSLSTEDEIRTYSINDCPVTHPSQLGNPFLGLPLETGKCES 60

Query: 519  CGTAEIGNCEGHFGHIELPVPIYHPSHVSELRDILSMICLKCLRVKK--VRQGEVKGKIS 692
            CG +E G CEGHFG+IELPVPIYHP HV+ELR IL+++CLKCLRVKK  V+Q E K   S
Sbjct: 61   CGASENGKCEGHFGYIELPVPIYHPCHVTELRQILNVVCLKCLRVKKGKVKQTEGKDNTS 120

Query: 693  SISCFYCRDLPPISVKEGKTSDGAIFLQLTVSSRTKMRESFWNFLDRFGYHYGAT-FCRP 869
            ++SC+YCRDLP +S+KE KT+DGA  L+L +  R  M E  WNFLD++G+H+G T  CR 
Sbjct: 121  ALSCYYCRDLPALSLKEIKTADGAFRLELKMPPRKFMTEGSWNFLDKYGFHHGGTSHCRT 180

Query: 870  LLPYEALNILKQIPEETKKALSGKGYSPQRGFIMQHLPVPPNCLCVPEINDGKCVMSSDI 1049
            LLP EALNILK+IPEETK+ L+ +GY  Q G++M++LPVPPNCL +PE  DG+ +MS DI
Sbjct: 181  LLPEEALNILKKIPEETKRKLAARGYIAQSGYVMKYLPVPPNCLYIPEFTDGQSIMSYDI 240

Query: 1050 SKSLLKKVLNKIELIKRSRSGSPNFESHEVESNDLQLSITQYIHLRGTTKAPHDIKSRFV 1229
            S SLLKKVL KIE IK+SR+GSPNFESHEVES DLQLSI QYIHLRGTT+ P D   RF 
Sbjct: 241  SISLLKKVLQKIEQIKKSRAGSPNFESHEVESCDLQLSIAQYIHLRGTTRGPQDNTKRFA 300

Query: 1230 QGSESSELPSKQWLEKIRTLFISKGSGFSSRCVITGDPYIGVDVIGLPSEIAKRITFEER 1409
              ++ S L +KQWLEK+RTLFISKGSGFSSR V+TGDPYIGVDVIGLPSE+AKRITFEE+
Sbjct: 301  ISTDPSALSTKQWLEKMRTLFISKGSGFSSRSVLTGDPYIGVDVIGLPSEVAKRITFEEQ 360

Query: 1410 VTEYNINHLQNIVDKRLCITYKDGSSTYAISLGSKGHTSLKVGQIINRQIIDGDIVFINR 1589
            VT+ N+N LQ IVDK LC+TY+DG +TYAI++GSKGHT+LKVGQ I+R+I+DGD+VF+NR
Sbjct: 361  VTDINLNRLQEIVDKGLCLTYRDGQATYAITVGSKGHTTLKVGQTISRRIVDGDVVFLNR 420

Query: 1590 PPSTHKHSLQAFHVYVHEDHTVKINPLICAPLGADFDGDCIHIFYPQSLSAKAEVSELFS 1769
            PPSTHKHSLQAF VYVHEDHTVKINPLICAP  ADFDGDC+HI+YPQSL+AKAE  ELFS
Sbjct: 421  PPSTHKHSLQAFRVYVHEDHTVKINPLICAPFAADFDGDCVHIYYPQSLAAKAEALELFS 480

Query: 1770 VEKQLLSSHSGNMNLQLVHDSLLALKLISNLSFIGKAVAQQLSMFESPVLPSPAVIKANN 1949
            VEKQL SSHSG +NLQLV DSLLALK +S+ + + K  A QL+M  +  LP PAVIK+  
Sbjct: 481  VEKQLTSSHSGKVNLQLVSDSLLALKHMSSRTMLSKEAANQLAMLVTCSLPDPAVIKSK- 539

Query: 1950 HGPCWTFLQILQNVLPSHLNSCGDNYTIYQSEFLKFDSSRDIVQSLLTDI 2099
              P WT  QI+Q  LP  L S GD + +  S  +K D  ++ VQ+  +D+
Sbjct: 540  --PYWTISQIVQGALPKALTSQGDKHVVRDSTIIKLDLDKESVQTSFSDL 587


>gb|EEC72510.1| hypothetical protein OsI_05888 [Oryza sativa Indica Group]
          Length = 1867

 Score =  791 bits (2043), Expect = 0.0
 Identities = 387/590 (65%), Positives = 472/590 (80%), Gaps = 3/590 (0%)
 Frame = +3

Query: 339  MENKLSSPLVLDGSVCNIKFSISTTEEIMTYSINECPISHPSQLANPFLGLPLESGRCES 518
            ME   S+  V +G++ +IK S+ST +EI TYSIN+CP++HPSQL NPFLGLPLE+G+CES
Sbjct: 1    MEEDQSAIPVAEGAIKSIKLSLSTEDEIRTYSINDCPVTHPSQLGNPFLGLPLETGKCES 60

Query: 519  CGTAEIGNCEGHFGHIELPVPIYHPSHVSELRDILSMICLKCLRVKK--VRQGEVKGKIS 692
            CG +E G CEGHFG+IELPVPIYHP HV+ELR IL+++CLKCLRVKK  V+Q E K   S
Sbjct: 61   CGASENGKCEGHFGYIELPVPIYHPCHVTELRQILNVVCLKCLRVKKGKVKQTEGKDNTS 120

Query: 693  SISCFYCRDLPPISVKEGKTSDGAIFLQLTVSSRTKMRESFWNFLDRFGYHYGAT-FCRP 869
            ++SC+YCRDLP +S+KE KT+DGA  L+L +  R  M E  WNFLD++G+H+G T  CR 
Sbjct: 121  ALSCYYCRDLPALSLKEIKTADGAFRLELKMPPRKFMTEGSWNFLDKYGFHHGGTSHCRT 180

Query: 870  LLPYEALNILKQIPEETKKALSGKGYSPQRGFIMQHLPVPPNCLCVPEINDGKCVMSSDI 1049
            LLP EALNILK+IPEETK+ L+ +GY  Q G++M++LPVPPNCL +PE  DG+ +MS DI
Sbjct: 181  LLPEEALNILKKIPEETKRKLAARGYIAQSGYVMKYLPVPPNCLYIPEFTDGQSIMSYDI 240

Query: 1050 SKSLLKKVLNKIELIKRSRSGSPNFESHEVESNDLQLSITQYIHLRGTTKAPHDIKSRFV 1229
            S SLLKKVL KIE IK+SR+GSPNFESHEVES DLQLSI QYIHLRGTT+ P D   RF 
Sbjct: 241  SISLLKKVLQKIEQIKKSRAGSPNFESHEVESCDLQLSIAQYIHLRGTTRGPQDNTKRFA 300

Query: 1230 QGSESSELPSKQWLEKIRTLFISKGSGFSSRCVITGDPYIGVDVIGLPSEIAKRITFEER 1409
              ++ S L +KQWLEK+RTLFISKGSGFSSR V+TGDPYIGVDVIGLPSE+AKRITFEE+
Sbjct: 301  ISTDPSALSTKQWLEKMRTLFISKGSGFSSRSVLTGDPYIGVDVIGLPSEVAKRITFEEQ 360

Query: 1410 VTEYNINHLQNIVDKRLCITYKDGSSTYAISLGSKGHTSLKVGQIINRQIIDGDIVFINR 1589
            VT+ N+N LQ IVDK LC+TY+DG +TYAI++GSKGHT+LKVGQ I+R+I+DGD+VF+NR
Sbjct: 361  VTDINLNRLQEIVDKGLCLTYRDGQATYAITVGSKGHTTLKVGQTISRRIVDGDVVFLNR 420

Query: 1590 PPSTHKHSLQAFHVYVHEDHTVKINPLICAPLGADFDGDCIHIFYPQSLSAKAEVSELFS 1769
            PPSTHKHSLQAF VYVHEDHTVKINPLICAP  ADFDGDC+HI+YPQSL+AKAE  ELFS
Sbjct: 421  PPSTHKHSLQAFRVYVHEDHTVKINPLICAPFAADFDGDCVHIYYPQSLAAKAEALELFS 480

Query: 1770 VEKQLLSSHSGNMNLQLVHDSLLALKLISNLSFIGKAVAQQLSMFESPVLPSPAVIKANN 1949
            VEKQL SSHSG +NLQLV DSLLALK +S+ + + K  A QL+M  +  LP PAVIK+  
Sbjct: 481  VEKQLTSSHSGKVNLQLVSDSLLALKHMSSRTMLSKEAANQLAMLVTCSLPDPAVIKSK- 539

Query: 1950 HGPCWTFLQILQNVLPSHLNSCGDNYTIYQSEFLKFDSSRDIVQSLLTDI 2099
              P WT  QI+Q  LP  L S GD + +  S  +K D  ++ VQ+  +D+
Sbjct: 540  --PYWTISQIVQGALPKALTSQGDKHVVRDSTIIKLDLDKESVQTSFSDL 587


>ref|XP_006646896.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Oryza
            brachyantha]
          Length = 1993

 Score =  781 bits (2018), Expect = 0.0
 Identities = 380/590 (64%), Positives = 469/590 (79%), Gaps = 3/590 (0%)
 Frame = +3

Query: 339  MENKLSSPLVLDGSVCNIKFSISTTEEIMTYSINECPISHPSQLANPFLGLPLESGRCES 518
            ME   S+  V +G++ +IK S++T +EI  YSIN+CP++HPSQL NPFLGLPLE+G+CES
Sbjct: 1    MEEDQSAIPVAEGAIKSIKLSLATEDEIRIYSINDCPVTHPSQLGNPFLGLPLETGKCES 60

Query: 519  CGTAEIGNCEGHFGHIELPVPIYHPSHVSELRDILSMICLKCLRVKK--VRQGEVKGKIS 692
            CG +E G CEGHFG+IELPVPIYHP HV+ELR IL+++C KCLRVKK  V+  E K   S
Sbjct: 61   CGASENGKCEGHFGYIELPVPIYHPCHVTELRQILNLVCFKCLRVKKGKVKHTEGKDNTS 120

Query: 693  SISCFYCRDLPPISVKEGKTSDGAIFLQLTVSSRTKMRESFWNFLDRFGYHYGAT-FCRP 869
            ++SC+YCRDLP +S+KE KT+DGA+ L+L    R  M E  WNFLD++G+H+G T  CR 
Sbjct: 121  ALSCYYCRDLPALSLKENKTADGAVRLELKAPPRKFMTEGSWNFLDKYGFHHGGTSHCRT 180

Query: 870  LLPYEALNILKQIPEETKKALSGKGYSPQRGFIMQHLPVPPNCLCVPEINDGKCVMSSDI 1049
            LLP EALNILK+IP+ETK+ L+ +GY  Q G++M++LPVPPNCL +PE  DG+ +MS DI
Sbjct: 181  LLPEEALNILKKIPDETKRKLAARGYIAQPGYVMKYLPVPPNCLYIPEFTDGQSIMSYDI 240

Query: 1050 SKSLLKKVLNKIELIKRSRSGSPNFESHEVESNDLQLSITQYIHLRGTTKAPHDIKSRFV 1229
            S SLLKKVL KIE IK+SR+GSPNFESHEVES+DLQLSI QYIHLRGTT+ P D   RF 
Sbjct: 241  SISLLKKVLQKIEQIKKSRAGSPNFESHEVESSDLQLSIAQYIHLRGTTRGPQDNTKRFS 300

Query: 1230 QGSESSELPSKQWLEKIRTLFISKGSGFSSRCVITGDPYIGVDVIGLPSEIAKRITFEER 1409
              ++SS L +KQWLEK+RTLFISKGSGFSSR V+TGDPYIGVD++GLPSE+AKRITFEE+
Sbjct: 301  ISTDSSALSTKQWLEKMRTLFISKGSGFSSRSVLTGDPYIGVDMVGLPSEVAKRITFEEQ 360

Query: 1410 VTEYNINHLQNIVDKRLCITYKDGSSTYAISLGSKGHTSLKVGQIINRQIIDGDIVFINR 1589
            VT  NIN LQ IVDK LC+TY+DG +TYAI++GSKGHT+LKVGQ I+R+I+DGDIVF+NR
Sbjct: 361  VTNININKLQEIVDKGLCLTYRDGQATYAITVGSKGHTTLKVGQTISRRIVDGDIVFLNR 420

Query: 1590 PPSTHKHSLQAFHVYVHEDHTVKINPLICAPLGADFDGDCIHIFYPQSLSAKAEVSELFS 1769
            PPSTHKHSLQAF  YVHEDHTVKINPLIC+P  ADFDGDC+HI+YPQSL+AKAE  ELFS
Sbjct: 421  PPSTHKHSLQAFRAYVHEDHTVKINPLICSPFAADFDGDCVHIYYPQSLAAKAEALELFS 480

Query: 1770 VEKQLLSSHSGNMNLQLVHDSLLALKLISNLSFIGKAVAQQLSMFESPVLPSPAVIKANN 1949
            VEKQL SSHSG +NLQL +DSLLALK +S  + + K VA QL+M  +  LP PA+IK+  
Sbjct: 481  VEKQLTSSHSGKVNLQLANDSLLALKHMSFRTILSKEVANQLAMNVTYSLPKPALIKSRP 540

Query: 1950 HGPCWTFLQILQNVLPSHLNSCGDNYTIYQSEFLKFDSSRDIVQSLLTDI 2099
            H   WT  QI+Q  LP  L S GD + +  S  +K D  ++ VQ+  +D+
Sbjct: 541  H---WTIAQIVQGALPKDLTSQGDKHLVRDSTIIKLDLDKESVQTSFSDL 587


>ref|XP_004951807.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Setaria
            italica]
          Length = 2038

 Score =  771 bits (1992), Expect = 0.0
 Identities = 368/595 (61%), Positives = 472/595 (79%), Gaps = 4/595 (0%)
 Frame = +3

Query: 339  MENKLSSPLVLDGSVCNIKFSISTTEEIMTYSINECPISHPSQLANPFLGLPLESGRCES 518
            ME   S+ L  +G++ +IK S+ST EEI TYSIN+CP++HPSQLANPFLGLPLE+G+CE+
Sbjct: 1    MEEDQSAILFAEGAIKSIKLSLSTEEEICTYSINDCPVNHPSQLANPFLGLPLEAGKCEA 60

Query: 519  CGTAEIGNCEGHFGHIELPVPIYHPSHVSELRDILSMICLKCLRVKKVRQGEVKGK---I 689
            CG +E   CEGHFG+IELPVPIYHP H+SELR +LS+IC KCLR+KK +  +  GK    
Sbjct: 61   CGASENDKCEGHFGYIELPVPIYHPCHISELRQLLSLICFKCLRIKKGKVNKQNGKETAS 120

Query: 690  SSISCFYCRDLPPISVKEGKTSDGAIFLQLTVSSRTKMRESFWNFLDRFGYHYGAT-FCR 866
            +++SC+YCRD+P +S+KE KT+DGAI L+L    R  M E  WNFLD++G+HYG +   R
Sbjct: 121  ATLSCYYCRDIPALSLKETKTTDGAIRLELRAPPRKHMTERSWNFLDKYGFHYGGSAHSR 180

Query: 867  PLLPYEALNILKQIPEETKKALSGKGYSPQRGFIMQHLPVPPNCLCVPEINDGKCVMSSD 1046
             LLP EALNILK++P++T++ L+ +GY+ Q G++M++LPVPPNCL +PE  DG+ +MS D
Sbjct: 181  LLLPEEALNILKKVPDDTRRKLAARGYTVQSGYVMKYLPVPPNCLYIPEFTDGQSIMSYD 240

Query: 1047 ISKSLLKKVLNKIELIKRSRSGSPNFESHEVESNDLQLSITQYIHLRGTTKAPHDIKSRF 1226
            IS +LLKKVL KIE IKRSRSGSPNFESHE ES D+QL++ QYIHLRGTT+ P D   RF
Sbjct: 241  ISIALLKKVLQKIEQIKRSRSGSPNFESHEEESCDIQLAVGQYIHLRGTTRGPQDNSKRF 300

Query: 1227 VQGSESSELPSKQWLEKIRTLFISKGSGFSSRCVITGDPYIGVDVIGLPSEIAKRITFEE 1406
              G++++ L +KQWLEK+RTLFISKGSGFSSR V+TGDPYIGVDVIGLPSE+AKRITFEE
Sbjct: 301  AVGTDTAALSTKQWLEKMRTLFISKGSGFSSRSVLTGDPYIGVDVIGLPSEVAKRITFEE 360

Query: 1407 RVTEYNINHLQNIVDKRLCITYKDGSSTYAISLGSKGHTSLKVGQIINRQIIDGDIVFIN 1586
            +VT+ NIN LQ +VDK LC+TY+DG  TYAI++GSKGHT+LKVGQ I+R+I+DGD+VF+N
Sbjct: 361  QVTDININRLQEVVDKGLCLTYRDGKDTYAITVGSKGHTTLKVGQTISRRIVDGDVVFLN 420

Query: 1587 RPPSTHKHSLQAFHVYVHEDHTVKINPLICAPLGADFDGDCIHIFYPQSLSAKAEVSELF 1766
            RPPSTHKHSLQAF+ YVH+DHTVKINPL+C+P  ADFDGDC+HI+YPQSL+AKAE  ELF
Sbjct: 421  RPPSTHKHSLQAFYAYVHDDHTVKINPLMCSPFSADFDGDCVHIYYPQSLAAKAEALELF 480

Query: 1767 SVEKQLLSSHSGNMNLQLVHDSLLALKLISNLSFIGKAVAQQLSMFESPVLPSPAVIKAN 1946
            SVEKQL+SSHSG +NLQL +DSL+A+K +S+ + + K +A QL+MF    LP+PAVIK+ 
Sbjct: 481  SVEKQLISSHSGQVNLQLGNDSLVAMKAMSSRTMLSKELANQLAMFVPFSLPAPAVIKSI 540

Query: 1947 NHGPCWTFLQILQNVLPSHLNSCGDNYTIYQSEFLKFDSSRDIVQSLLTDIPTSI 2111
               P WT  QI+Q  LP+ L   G  + +     +K D  +D VQ    D+ +S+
Sbjct: 541  ---PAWTITQIVQGALPAKLTCQGKTHLVRDGNIIKLDLDKDHVQDSFNDLVSSV 592


>ref|XP_003577164.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Brachypodium
            distachyon]
          Length = 1935

 Score =  754 bits (1947), Expect = 0.0
 Identities = 367/592 (61%), Positives = 470/592 (79%), Gaps = 1/592 (0%)
 Frame = +3

Query: 339  MENKLSSPLVLDGSVCNIKFSISTTEEIMTYSINECPISHPSQLANPFLGLPLESGRCES 518
            ME   S+ LV +G++ +IK S+ST +EI+TYSIN+CP++HPSQL NPFLGLPLE+G+CES
Sbjct: 1    MEEDQSAVLVAEGAIKSIKLSLSTEDEILTYSINDCPVTHPSQLGNPFLGLPLETGKCES 60

Query: 519  CGTAEIGNCEGHFGHIELPVPIYHPSHVSELRDILSMICLKCLRVKKVRQGEVKGKISSI 698
            CG +E G CEGHFG+IELPVPIYHP HVSELR +LS++CLKCLR+KK       GK    
Sbjct: 61   CGASENGKCEGHFGYIELPVPIYHPCHVSELRQLLSLVCLKCLRIKK-------GK---- 109

Query: 699  SCFYCRDLPPISVKEGKTSDGAIFLQLTVSSRTKMRESFWNFLDRFGYHYG-ATFCRPLL 875
                  D+P +S+KE KT+DGA  L+L    R  M++S WNFLD++G+H+G A+  R LL
Sbjct: 110  ------DVPALSLKEVKTADGAFRLELRAPPRRLMKDSSWNFLDKYGFHHGGASHFRTLL 163

Query: 876  PYEALNILKQIPEETKKALSGKGYSPQRGFIMQHLPVPPNCLCVPEINDGKCVMSSDISK 1055
            P EALNILK+IP++T+K L+ +GY  Q G++M++LPVPPNCL +PE  DG+ +MS DIS 
Sbjct: 164  PEEALNILKKIPDDTRKKLAARGYIAQSGYVMKYLPVPPNCLYIPEFTDGQSIMSYDISI 223

Query: 1056 SLLKKVLNKIELIKRSRSGSPNFESHEVESNDLQLSITQYIHLRGTTKAPHDIKSRFVQG 1235
            SLLKK+L++IE IK+SR+G+PNFESHE ES+DLQ+SI QYIHLRGTTK P D K RF   
Sbjct: 224  SLLKKILHRIEQIKKSRAGTPNFESHEAESSDLQISIAQYIHLRGTTKGPQDTK-RFTIS 282

Query: 1236 SESSELPSKQWLEKIRTLFISKGSGFSSRCVITGDPYIGVDVIGLPSEIAKRITFEERVT 1415
            ++SS L +KQWLEK+RTLFISKGSGFSSR V+TGDPYIGVDV+GLPSE+AKRITFEE+VT
Sbjct: 283  TDSSHLSTKQWLEKMRTLFISKGSGFSSRSVLTGDPYIGVDVVGLPSEVAKRITFEEQVT 342

Query: 1416 EYNINHLQNIVDKRLCITYKDGSSTYAISLGSKGHTSLKVGQIINRQIIDGDIVFINRPP 1595
            + NI  LQ +VDK LC+TY+DG +TYAI++GSKG+T+LKVGQ I+R+I+DGD+VF+NRPP
Sbjct: 343  DINIKRLQEVVDKGLCLTYRDGQTTYAITVGSKGYTTLKVGQTISRRIVDGDVVFLNRPP 402

Query: 1596 STHKHSLQAFHVYVHEDHTVKINPLICAPLGADFDGDCIHIFYPQSLSAKAEVSELFSVE 1775
            STHKHSLQAF+VY+H+DHTVKINPLIC+PL ADFDGDC+HI+YPQSL+AKAE  ELFSVE
Sbjct: 403  STHKHSLQAFYVYIHDDHTVKINPLICSPLAADFDGDCVHIYYPQSLAAKAEALELFSVE 462

Query: 1776 KQLLSSHSGNMNLQLVHDSLLALKLISNLSFIGKAVAQQLSMFESPVLPSPAVIKANNHG 1955
            KQL +SH+G +NLQL +DSLLALK +S+ + + K  A QL+M  S  LP PAV+K     
Sbjct: 463  KQLTNSHNGKVNLQLSNDSLLALKHMSSRTVLSKESANQLAMLLSFSLPDPAVVKLK--- 519

Query: 1956 PCWTFLQILQNVLPSHLNSCGDNYTIYQSEFLKFDSSRDIVQSLLTDIPTSI 2111
            PCWT  QI+Q  LP+ L   G  + +  S  +K D +++ VQ+  +D+ +SI
Sbjct: 520  PCWTITQIIQGALPAALTCEGGRFLVKDSTVIKLDLAKESVQASFSDLVSSI 571


>gb|EMT23234.1| DNA-directed RNA polymerase II subunit RPB1-B [Aegilops tauschii]
          Length = 2017

 Score =  737 bits (1903), Expect = 0.0
 Identities = 370/644 (57%), Positives = 466/644 (72%), Gaps = 54/644 (8%)
 Frame = +3

Query: 342  ENKLSSPLVLDGSVCNIKFSISTTEEIMTYSINECPISHPSQLANPFLGLPLESGRCESC 521
            E   S+ LV +G++ +IK S+ST EEI TYSIN+CP++HPSQL NPFLGLPLE+G+CESC
Sbjct: 47   EEDQSAVLVAEGAIKSIKLSLSTEEEICTYSINDCPVTHPSQLGNPFLGLPLETGKCESC 106

Query: 522  GTAEIGNCEGHFGHIELPVPIYHPSHVSELRDILSMICLKCLRVKK--VRQGEVKGKISS 695
            G  E G CEGHFG IELPVP+YHP HVSELR +LSM+CL CLR+KK  V+Q   K  +S 
Sbjct: 107  GATENGKCEGHFGFIELPVPVYHPCHVSELRQLLSMVCLMCLRIKKGKVKQKNGKENVSV 166

Query: 696  ISCFYCRDLPPISVKEGKTSDGAIFLQLTVSSRTKMRESFWNFLDRFG--YHYGATFCRP 869
             +C YCR LP + +KE KT DGA  L+L    +  M E  W+FL+++G  +H GA+ CR 
Sbjct: 167  TACHYCRGLPALYLKEIKTEDGAFRLELRAPPKKHMTERSWDFLNKYGEFHHGGASHCRT 226

Query: 870  LLPYE--------------------------------------------------ALNIL 899
            LLP E                                                  A NIL
Sbjct: 227  LLPVELLWTVKIQIHPLSLGRTMLFETFRKISRIGDVCTRGVPYMAKAFGDMTLRAFNIL 286

Query: 900  KQIPEETKKALSGKGYSPQRGFIMQHLPVPPNCLCVPEINDGKCVMSSDISKSLLKKVLN 1079
            K+IP++TKK L+ +G+  Q G++M++LPVPPNCL +PE  DG+ +MS DIS SLLKK+L 
Sbjct: 287  KKIPDDTKKKLAARGFIAQPGYVMKYLPVPPNCLYIPEFTDGQSIMSYDISISLLKKILQ 346

Query: 1080 KIELIKRSRSGSPNFESHEVESNDLQLSITQYIHLRGTTKAPHDIKSRFVQGSESSELPS 1259
            KIE IK+SRSGSPNFESH+ ES DLQLSI QYI LRGTTK P D K RF   ++SS L +
Sbjct: 347  KIEQIKKSRSGSPNFESHDSESADLQLSIGQYIQLRGTTKGPQDAK-RFAVSTDSSHLST 405

Query: 1260 KQWLEKIRTLFISKGSGFSSRCVITGDPYIGVDVIGLPSEIAKRITFEERVTEYNINHLQ 1439
            KQWLEK++TLFISKGSGFSSR V+TGDPYIG DV+GLPSE+AKRITFEE+VT+ NIN LQ
Sbjct: 406  KQWLEKMKTLFISKGSGFSSRSVLTGDPYIGADVVGLPSEVAKRITFEEQVTDININRLQ 465

Query: 1440 NIVDKRLCITYKDGSSTYAISLGSKGHTSLKVGQIINRQIIDGDIVFINRPPSTHKHSLQ 1619
             +VDK LC+TY+DG +TYAI++GSKG+T+LKVGQ I+R+I+DGD+VF+NRPPSTHKHSLQ
Sbjct: 466  EVVDKGLCLTYRDGQTTYAITVGSKGYTTLKVGQTISRRIVDGDVVFLNRPPSTHKHSLQ 525

Query: 1620 AFHVYVHEDHTVKINPLICAPLGADFDGDCIHIFYPQSLSAKAEVSELFSVEKQLLSSHS 1799
            AF VY+H+DHTVKINPLIC+PL ADFDGDC+HI+YPQSL+AKAE  ELFSVEKQL +SH+
Sbjct: 526  AFTVYIHDDHTVKINPLICSPLAADFDGDCVHIYYPQSLAAKAEALELFSVEKQLTNSHN 585

Query: 1800 GNMNLQLVHDSLLALKLISNLSFIGKAVAQQLSMFESPVLPSPAVIKANNHGPCWTFLQI 1979
            G +NLQL +DSLLALK +S+ + + K  A QL+M  S  LP PAV+K+    PCWT  QI
Sbjct: 586  GKVNLQLANDSLLALKHMSSRTMLSKESANQLAMLLSLSLPPPAVVKSK---PCWTIAQI 642

Query: 1980 LQNVLPSHLNSCGDNYTIYQSEFLKFDSSRDIVQSLLTDIPTSI 2111
            +Q+ LP+ L   GD + +  S  +K D  ++ VQ+  +D+ +SI
Sbjct: 643  MQSALPAELTCEGDRFLVRDSTVIKLDIDKESVQASFSDLVSSI 686


>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
          Length = 1830

 Score =  736 bits (1901), Expect = 0.0
 Identities = 354/585 (60%), Positives = 454/585 (77%)
 Frame = +3

Query: 357  SPLVLDGSVCNIKFSISTTEEIMTYSINECPISHPSQLANPFLGLPLESGRCESCGTAEI 536
            S  +LDG +  I+F ++T +EI   S+++CPISH SQL NPFLGLPLE G+CESCGTAE 
Sbjct: 5    SSTILDGEISGIRFGLATRQEICIASVSDCPISHASQLTNPFLGLPLEFGKCESCGTAEP 64

Query: 537  GNCEGHFGHIELPVPIYHPSHVSELRDILSMICLKCLRVKKVRQGEVKGKISSISCFYCR 716
            G CEGHFG+IELP+PIYHP HVSEL+ +LS++CLKCL+++K +     G    +    C+
Sbjct: 65   GQCEGHFGYIELPIPIYHPGHVSELKRMLSLLCLKCLKIRKSKVTN-NGITEQLLAPCCQ 123

Query: 717  DLPPISVKEGKTSDGAIFLQLTVSSRTKMRESFWNFLDRFGYHYGATFCRPLLPYEALNI 896
            D P +SV+E + ++GA FL+L + SR++ ++ FW+FL R+GY YG    R LLP E + I
Sbjct: 124  DSPQVSVREFRPTEGACFLELKIPSRSRPKDGFWDFLARYGYRYGHNLSRILLPSEVMEI 183

Query: 897  LKQIPEETKKALSGKGYSPQRGFIMQHLPVPPNCLCVPEINDGKCVMSSDISKSLLKKVL 1076
            L++IPE+T+K L  KGY PQ G+I+Q+LPVPPNCL VP+I+DG  +MSSD+S S+LKKVL
Sbjct: 184  LRRIPEDTRKKLVRKGYFPQDGYILQYLPVPPNCLSVPDISDGVSIMSSDLSVSMLKKVL 243

Query: 1077 NKIELIKRSRSGSPNFESHEVESNDLQLSITQYIHLRGTTKAPHDIKSRFVQGSESSELP 1256
             +IE+IK SRSG PNFESH++E+N+LQ SI QY+ +RGT K    + +RF    E +E  
Sbjct: 244  KQIEVIKGSRSGEPNFESHKIEANNLQSSIEQYLEVRGTAKTSRSLDTRFGSSKEPNESS 303

Query: 1257 SKQWLEKIRTLFISKGSGFSSRCVITGDPYIGVDVIGLPSEIAKRITFEERVTEYNINHL 1436
            +K WLEK+RTLFI KGSGFSSR VITGD Y  V+ IGLP EIA+RITFEERV  +N+ HL
Sbjct: 304  TKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEIGLPFEIAQRITFEERVNVHNMKHL 363

Query: 1437 QNIVDKRLCITYKDGSSTYAISLGSKGHTSLKVGQIINRQIIDGDIVFINRPPSTHKHSL 1616
            QN+VD++LC+TY+DG STY++  GSKGHT L+ GQ+++R+I+DGDIVFINRPP+THKHSL
Sbjct: 364  QNLVDEKLCLTYRDGLSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHSL 423

Query: 1617 QAFHVYVHEDHTVKINPLICAPLGADFDGDCIHIFYPQSLSAKAEVSELFSVEKQLLSSH 1796
            QA  VYVH+DHTVKINPLIC PL ADFDGDC+H+FYPQSL AKAEV ELFSVEKQLLSSH
Sbjct: 424  QALSVYVHDDHTVKINPLICGPLSADFDGDCVHLFYPQSLGAKAEVLELFSVEKQLLSSH 483

Query: 1797 SGNMNLQLVHDSLLALKLISNLSFIGKAVAQQLSMFESPVLPSPAVIKANNHGPCWTFLQ 1976
            SGN+NLQL  DSLL+LK++    F+ KA AQQL MF S  LP PA++K+   GPCWT LQ
Sbjct: 484  SGNLNLQLATDSLLSLKVLFERYFLNKAAAQQLVMFVSMSLPRPALLKSPCSGPCWTALQ 543

Query: 1977 ILQNVLPSHLNSCGDNYTIYQSEFLKFDSSRDIVQSLLTDIPTSI 2111
            ILQ  LPS+ +  G+ + I +S  LK D +RD++QSL+ +I TSI
Sbjct: 544  ILQTALPSYFDCIGERHWISKSAILKVDYNRDVLQSLVNEIVTSI 588


>ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit
            1 [Solanum lycopersicum]
          Length = 1632

 Score =  729 bits (1881), Expect = 0.0
 Identities = 363/594 (61%), Positives = 459/594 (77%), Gaps = 3/594 (0%)
 Frame = +3

Query: 339  MENKLSSPLVLDGSVCNIKFSISTTEEIMTYSINECPISHPSQLANPFLGLPLESGRCES 518
            ME K  S  V DG V  IKF ++T +EI   SI++CPI+HPS L NPFLGLPLE+GRCES
Sbjct: 1    MEEKSLSSKVSDGIVKRIKFGLATPQEICKSSISDCPITHPSLLLNPFLGLPLEAGRCES 60

Query: 519  CGTAEIGNCEGHFGHIELPVPIYHPSHVSELRDILSMICLKCLRVK--KVRQGEVKGKIS 692
            CGTAE G CEGHFG+IELP+PIYHP HVSEL+ +LS++CLKCL++K  KV+   V  ++ 
Sbjct: 61   CGTAEPGQCEGHFGYIELPIPIYHPDHVSELKKMLSLLCLKCLKMKNRKVKNAGVLERML 120

Query: 693  SISCFYCRDLPPISVKEGKTSDGAIFLQLTV-SSRTKMRESFWNFLDRFGYHYGATFCRP 869
            S SC  C D+  +SV EGKTSDGA +L+L V  +  K++E  WNFL+++GY YG  + RP
Sbjct: 121  S-SC--CEDVSQVSVYEGKTSDGASYLELKVPKNAAKLQE--WNFLEKYGYRYGDGYSRP 175

Query: 870  LLPYEALNILKQIPEETKKALSGKGYSPQRGFIMQHLPVPPNCLCVPEINDGKCVMSSDI 1049
            LLP E L IL++I E+T+K LS KGY PQ G+I+Q+LPVPPNCL VP+I+DG  +MSSD 
Sbjct: 176  LLPSEVLAILRRIREDTRKKLSAKGYFPQEGYILQYLPVPPNCLSVPDISDGNNIMSSDH 235

Query: 1050 SKSLLKKVLNKIELIKRSRSGSPNFESHEVESNDLQLSITQYIHLRGTTKAPHDIKSRFV 1229
            S ++L+KVL +I++IK SRSG+PNFE+HEVE+NDLQ ++ QY+  RGT KA  D+  RF 
Sbjct: 236  SITMLRKVLRQIDIIKSSRSGTPNFEAHEVEANDLQAAVVQYLQFRGTGKASRDVDKRFG 295

Query: 1230 QGSESSELPSKQWLEKIRTLFISKGSGFSSRCVITGDPYIGVDVIGLPSEIAKRITFEER 1409
               E+++  +K WLEK++TLFI KGSGFSSR VITGDPY GV  IGLP EIA++ITFEER
Sbjct: 296  IHKEAADTTTKAWLEKMKTLFIRKGSGFSSRSVITGDPYKGVGEIGLPCEIAQKITFEER 355

Query: 1410 VTEYNINHLQNIVDKRLCITYKDGSSTYAISLGSKGHTSLKVGQIINRQIIDGDIVFINR 1589
            V+++N+ +LQ +VD++LC+TYKDGSSTY++  GSKGHT L+ GQI++R+I+DGD VFINR
Sbjct: 356  VSQHNMAYLQKLVDEKLCLTYKDGSSTYSLREGSKGHTFLRPGQIVHRRIMDGDTVFINR 415

Query: 1590 PPSTHKHSLQAFHVYVHEDHTVKINPLICAPLGADFDGDCIHIFYPQSLSAKAEVSELFS 1769
            PP+THKHSLQA  VYVH+DHTVKINPL+C PL ADFDGDCIH+FYPQSLSAKAEV ELF+
Sbjct: 416  PPTTHKHSLQALSVYVHDDHTVKINPLMCGPLSADFDGDCIHLFYPQSLSAKAEVLELFA 475

Query: 1770 VEKQLLSSHSGNMNLQLVHDSLLALKLISNLSFIGKAVAQQLSMFESPVLPSPAVIKANN 1949
            V KQLLSSH+GN NLQL  DSLL+LKL+ +  F  KA AQQL+MF    LP  AV+    
Sbjct: 476  VGKQLLSSHTGNFNLQLATDSLLSLKLMFSHYFFDKAAAQQLAMFLPMALPDSAVVDVRK 535

Query: 1950 HGPCWTFLQILQNVLPSHLNSCGDNYTIYQSEFLKFDSSRDIVQSLLTDIPTSI 2111
             G  WT LQIL   LP   +SCG+ +TI +S+FL  D  RD++ S+L D+ TSI
Sbjct: 536  SGAMWTTLQILGAALPDGFDSCGETHTIGKSQFLGIDYHRDLISSILNDVITSI 589


>ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis
            sativus]
          Length = 1959

 Score =  729 bits (1881), Expect = 0.0
 Identities = 353/591 (59%), Positives = 458/591 (77%)
 Frame = +3

Query: 339  MENKLSSPLVLDGSVCNIKFSISTTEEIMTYSINECPISHPSQLANPFLGLPLESGRCES 518
            ME   S   +LD  +  I+FS++  +EI   +I++CPI+H SQL+NPFLGLP+E G+CES
Sbjct: 1    MEEAPSCSSILDAEIVGIRFSLANGQEICIAAISDCPITHASQLSNPFLGLPIEFGKCES 60

Query: 519  CGTAEIGNCEGHFGHIELPVPIYHPSHVSELRDILSMICLKCLRVKKVRQGEVKGKISSI 698
            CGT+E G CEGHFG+IELP+PIYHP+H++EL+ +LS++CLKCL++KK +      ++ S 
Sbjct: 61   CGTSEPGKCEGHFGYIELPIPIYHPNHITELKKMLSLLCLKCLKMKKTKNIGFAERLLS- 119

Query: 699  SCFYCRDLPPISVKEGKTSDGAIFLQLTVSSRTKMRESFWNFLDRFGYHYGATFCRPLLP 878
            SC  C D   ++++E K +DGA +LQL V SRT ++E FW+FL+R+G+ YG  F R LLP
Sbjct: 120  SC--CEDASQVTIREAKKADGASYLQLKVPSRTSLQERFWDFLERYGFRYGDNFTRTLLP 177

Query: 879  YEALNILKQIPEETKKALSGKGYSPQRGFIMQHLPVPPNCLCVPEINDGKCVMSSDISKS 1058
             E   +LK+IP ET+K L+G+GY PQ G+I+Q+LPVPPNCL VPEI+DG  VMSSD + S
Sbjct: 178  CEVKEMLKKIPNETRKKLAGRGYYPQDGYILQYLPVPPNCLSVPEISDGVTVMSSDPAVS 237

Query: 1059 LLKKVLNKIELIKRSRSGSPNFESHEVESNDLQLSITQYIHLRGTTKAPHDIKSRFVQGS 1238
            +LKK+L ++E+IK SRSG+PNFESHEVE+NDLQL++ QY+ +RGT KA   I +RF    
Sbjct: 238  MLKKILKQVEIIKGSRSGAPNFESHEVEANDLQLAVDQYLQVRGTVKASRGIDARFGVNK 297

Query: 1239 ESSELPSKQWLEKIRTLFISKGSGFSSRCVITGDPYIGVDVIGLPSEIAKRITFEERVTE 1418
            E ++  +K WLEK+RTLFI KGSGFSSR VITGD Y  V+ IG+P E+A+RITFEERV+ 
Sbjct: 298  ELNDPSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKLVNEIGVPFEVAQRITFEERVSV 357

Query: 1419 YNINHLQNIVDKRLCITYKDGSSTYAISLGSKGHTSLKVGQIINRQIIDGDIVFINRPPS 1598
            +NI +LQ +VDK+LC+TY+DGSS Y++  GS GHT LK GQI++R+I+DGDIVFINRPP+
Sbjct: 358  HNIRYLQELVDKKLCLTYRDGSSAYSLREGSMGHTYLKPGQIVHRRIMDGDIVFINRPPT 417

Query: 1599 THKHSLQAFHVYVHEDHTVKINPLICAPLGADFDGDCIHIFYPQSLSAKAEVSELFSVEK 1778
            THKHSLQA  VY+H+DH VKINPLIC PL ADFDGDCIH+FYPQS++AKAEV  LFSVEK
Sbjct: 418  THKHSLQALRVYLHDDHVVKINPLICGPLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEK 477

Query: 1779 QLLSSHSGNMNLQLVHDSLLALKLISNLSFIGKAVAQQLSMFESPVLPSPAVIKANNHGP 1958
            QLLSSHSGN+NLQL +DSLL+LK++    F+GKA AQQL+MF S  LP PA++   +   
Sbjct: 478  QLLSSHSGNLNLQLANDSLLSLKMMFRKYFLGKAAAQQLAMFVSSYLPPPALLGVRSGSL 537

Query: 1959 CWTFLQILQNVLPSHLNSCGDNYTIYQSEFLKFDSSRDIVQSLLTDIPTSI 2111
             WT LQILQ VLP+  +  GD+Y I  S FLKFD  RD + SL+ +I TSI
Sbjct: 538  HWTALQILQTVLPASFDCHGDSYLIKNSNFLKFDFDRDAMPSLINEILTSI 588


>ref|XP_002513060.1| DNA-directed RNA polymerase, putative [Ricinus communis]
            gi|223548071|gb|EEF49563.1| DNA-directed RNA polymerase,
            putative [Ricinus communis]
          Length = 991

 Score =  726 bits (1875), Expect = 0.0
 Identities = 359/593 (60%), Positives = 460/593 (77%), Gaps = 3/593 (0%)
 Frame = +3

Query: 342  ENKLSSPLVLDGSVCNIKFSISTTEEIMTYSINECPISHPSQLANPFLGLPLESGRCESC 521
            EN  SS   L+G V  IKF ++T +EI   S+++CPISH SQL NPFLGLPLE G+CESC
Sbjct: 5    ENTQSS--FLEGEVVGIKFGLATYKEISAASVSDCPISHSSQLTNPFLGLPLEFGKCESC 62

Query: 522  GTAEIGNCEGHFGHIELPVPIYHPSHVSELRDILSMICLKCLRVK--KVRQGEVKGKISS 695
            GT+E G CEGHFG+IELP+PIYHPSHVSEL+ +LS++CLKCL++K  K++   V  ++  
Sbjct: 63   GTSEPGKCEGHFGYIELPIPIYHPSHVSELKRMLSLLCLKCLKLKTNKIKSSGVAERL-- 120

Query: 696  ISCFYCRDLPPISVKEGKTSDGAIFLQLTVSSRTKMRESFWNFLDRFGYHYGATFCRPLL 875
             SC  C +   IS+KE KT+DGA  LQL + SR ++R+ FWNFL+R+G+ YG    R LL
Sbjct: 121  FSC--CEEAAQISIKEVKTTDGAYILQLKLPSRMRLRDGFWNFLERYGFRYGDDITRTLL 178

Query: 876  PYEALNILKQIPEETKKALSGKGYSPQRGFIMQHLPVPPNCLCVPEINDGKCVMSSDISK 1055
            P E L +L++IP++T+K L+ KGY PQ G+IM+++PVPPNCL VP+I+DG  VMSSD+S 
Sbjct: 179  PCEVLEMLRRIPQDTRKKLAKKGYFPQDGYIMRYVPVPPNCLSVPDISDGVSVMSSDLSI 238

Query: 1056 SLLKKVLNKIELIKRSRSGSPNFESHEVESNDLQLSITQYIHLRGTTKAPHDIKSRFVQG 1235
            S+LKKVL ++E+IK SRSG PNFESHEVE+ DLQ ++ QY+ +RGT K+  D+  RF   
Sbjct: 239  SMLKKVLKQVEIIKSSRSGEPNFESHEVEAVDLQSAVDQYLQVRGTAKSARDVGERFGVH 298

Query: 1236 SESSELPSKQWLEKIRTLFISKGSGFSSRCVITGDPYIGVDVIGLPSEIAKRITFEERVT 1415
             ES++  +K WLEK+RTLFI KGSGFSSR VITGD Y  V+ IG+PSEIA+RITFEERV 
Sbjct: 299  KESNDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKCVNEIGIPSEIAQRITFEERVN 358

Query: 1416 EYNINHLQNIVDKRLCITYKDGSSTYAISLGSKGHTSLKVGQIINRQIIDGDIVFINRPP 1595
             +N+ +LQ +VD +LC+TY+DGSSTY++  GSKGHT L++GQI++R+I+DGD+VFINRPP
Sbjct: 359  AHNMQYLQELVDNKLCLTYRDGSSTYSLREGSKGHTFLRLGQIVHRRIMDGDMVFINRPP 418

Query: 1596 STHKHSLQAFHVYVHEDHTVKINPLICAPLGADFDGDCIHIFYPQSLSAKAEVSELFSVE 1775
            +THKHSLQA  VYVH+ HTVKINPLIC PL ADFDGDCIH+FYPQSL+AKAEV ELFSVE
Sbjct: 419  TTHKHSLQALSVYVHDGHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFSVE 478

Query: 1776 KQLLSSHSGNMNLQLVHDSLLALKLISNLSFIGKAVAQQLSMF-ESPVLPSPAVIKANNH 1952
            KQLLSSHSGN+NLQL  DSLL+LK + N  F+ +A AQQL+MF  S  LP PA+ KA+  
Sbjct: 479  KQLLSSHSGNLNLQLTSDSLLSLKTMFNTYFLDRAAAQQLAMFVSSSSLPQPALWKAHCS 538

Query: 1953 GPCWTFLQILQNVLPSHLNSCGDNYTIYQSEFLKFDSSRDIVQSLLTDIPTSI 2111
             P WT LQILQ  LPS  +  G+ Y I  ++ +K D SRD+VQ+++ DI  S+
Sbjct: 539  VPIWTALQILQTALPSQFDCSGERYLISNTDIVKVDFSRDVVQAVINDIVISM 591


>ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Populus trichocarpa]
            gi|550343552|gb|EEE78905.2| hypothetical protein
            POPTR_0003s19630g [Populus trichocarpa]
          Length = 1920

 Score =  725 bits (1872), Expect = 0.0
 Identities = 352/594 (59%), Positives = 455/594 (76%), Gaps = 4/594 (0%)
 Frame = +3

Query: 342  ENKLSSPLVLDGSVCNIKFSISTTEEIMTYSINECPISHPSQLANPFLGLPLESGRCESC 521
            EN  SS  + DG +  I+F ++T +EI T SI++CPISH SQL NPFLGLPLE G+CESC
Sbjct: 3    ENSQSS--IFDGEITGIRFGLATQKEICTASISDCPISHSSQLTNPFLGLPLEFGKCESC 60

Query: 522  GTAEIGNCEGHFGHIELPVPIYHPSHVSELRDILSMICLKCLRVKK----VRQGEVKGKI 689
            GT+E G CEGHFG I LP+PIYHPSH+SEL+ +LS+ICLKCL++K+    ++   V  ++
Sbjct: 61   GTSEPGKCEGHFGFIHLPIPIYHPSHISELKRMLSLICLKCLKLKRNKIQIKSNGVAERL 120

Query: 690  SSISCFYCRDLPPISVKEGKTSDGAIFLQLTVSSRTKMRESFWNFLDRFGYHYGATFCRP 869
             S      ++   IS++E K +DGA FL+L + SR+++R+  WNFL+R+G+ YG  F RP
Sbjct: 121  LSCCEVSIKECAQISIREVKNTDGACFLELKLPSRSRLRDGCWNFLERYGFRYGDDFTRP 180

Query: 870  LLPYEALNILKQIPEETKKALSGKGYSPQRGFIMQHLPVPPNCLCVPEINDGKCVMSSDI 1049
            LLP E + ILK+IP ET+K LSGKGY PQ G+I+Q LPVPPNCL VP ++DG  VMSSD+
Sbjct: 181  LLPCEVMQILKRIPAETRKKLSGKGYFPQDGYILQQLPVPPNCLSVPVVSDGITVMSSDL 240

Query: 1050 SKSLLKKVLNKIELIKRSRSGSPNFESHEVESNDLQLSITQYIHLRGTTKAPHDIKSRFV 1229
            S S+LKKVL + E+I+ SRSG+PNF++H+ E+  LQ  + QY+ +RGTTK   D+ +R+ 
Sbjct: 241  SISMLKKVLKQAEVIRSSRSGAPNFDAHKDEATSLQSMVDQYLQVRGTTKTSRDVDTRYG 300

Query: 1230 QGSESSELPSKQWLEKIRTLFISKGSGFSSRCVITGDPYIGVDVIGLPSEIAKRITFEER 1409
               ESSE  +K WLEK+RTLFI KGSGFSSR VITGD Y  V+ +G+P EIA+RITFEER
Sbjct: 301  VKKESSESTTKAWLEKMRTLFIRKGSGFSSRSVITGDAYTLVNQVGIPYEIAQRITFEER 360

Query: 1410 VTEYNINHLQNIVDKRLCITYKDGSSTYAISLGSKGHTSLKVGQIINRQIIDGDIVFINR 1589
            V+ +N+ +LQ +VD +LC+TYKDGSSTY++  GSKGHT L+ GQ+++R+I+DGDIVFINR
Sbjct: 361  VSVHNMRYLQELVDNKLCLTYKDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINR 420

Query: 1590 PPSTHKHSLQAFHVYVHEDHTVKINPLICAPLGADFDGDCIHIFYPQSLSAKAEVSELFS 1769
            PP+THKHSLQA  VYVH+DH VKINPLIC PL ADFDGDC+H+FYPQSL+AKAEV ELFS
Sbjct: 421  PPTTHKHSLQALSVYVHDDHAVKINPLICGPLSADFDGDCVHLFYPQSLAAKAEVLELFS 480

Query: 1770 VEKQLLSSHSGNMNLQLVHDSLLALKLISNLSFIGKAVAQQLSMFESPVLPSPAVIKANN 1949
            VEKQLLSSHSGN+NLQL  DSLL+LK++    F+GK+ AQQL+MF SP LP PA++K N 
Sbjct: 481  VEKQLLSSHSGNLNLQLTTDSLLSLKMMFKACFLGKSAAQQLAMFISPYLPQPALLKVNC 540

Query: 1950 HGPCWTFLQILQNVLPSHLNSCGDNYTIYQSEFLKFDSSRDIVQSLLTDIPTSI 2111
              P WT  QILQ  LP+  N  G+ + I  S FLK D +RD+V S++ +I  S+
Sbjct: 541  FFPHWTAHQILQMALPACFNCSGERFLIINSNFLKVDFNRDVVASVINEILISM 594


>ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citrus clementina]
            gi|557522591|gb|ESR33958.1| hypothetical protein
            CICLE_v10004129mg [Citrus clementina]
          Length = 1867

 Score =  718 bits (1853), Expect = 0.0
 Identities = 352/592 (59%), Positives = 456/592 (77%), Gaps = 1/592 (0%)
 Frame = +3

Query: 339  MENKLSSPLVLDGSVCNIKFSISTTEEIMTYSINECPISHPSQLANPFLGLPLESGRCES 518
            ME   SS  +L+G +  I+F ++T +EI T SI++C ISH SQLANPFLGLPLE G+CES
Sbjct: 1    MEENTSST-ILEGQIVGIRFGLATQKEICTASISDCSISHASQLANPFLGLPLEFGKCES 59

Query: 519  CGTAEIGNCEGHFGHIELPVPIYHPSHVSELRDILSMICLKCLRVKKVR-QGEVKGKISS 695
            CGT+E G CEGHFG+IELP+PIYHPSH+SEL+ +LS++CLKCL++K  + Q +  G    
Sbjct: 60   CGTSEPGKCEGHFGYIELPIPIYHPSHISELKRMLSLLCLKCLKMKSTKLQIKNDGVAQR 119

Query: 696  ISCFYCRDLPPISVKEGKTSDGAIFLQLTVSSRTKMRESFWNFLDRFGYHYGATFCRPLL 875
            +    C +   +S+ + KT+DGA +L+L + S+ ++   FWNFL+R+G+ YG +  R LL
Sbjct: 120  LLSSCCEEASQVSIVDVKTTDGAFYLELKLPSKFRLCAGFWNFLERYGFRYGDSLTRTLL 179

Query: 876  PYEALNILKQIPEETKKALSGKGYSPQRGFIMQHLPVPPNCLCVPEINDGKCVMSSDISK 1055
              E   +LK+IPEET+K L+GKGY PQ G+I+++LPVPPNCL VP+I+DG   MSSD+S 
Sbjct: 180  ASEVKEMLKRIPEETRKKLAGKGYFPQDGYILEYLPVPPNCLSVPDISDGVSTMSSDLSI 239

Query: 1056 SLLKKVLNKIELIKRSRSGSPNFESHEVESNDLQLSITQYIHLRGTTKAPHDIKSRFVQG 1235
            ++LKKVL ++E+I+ SRSG+PNFES EVESNDLQL++ QY+ +RGT K+  D+ +RF   
Sbjct: 240  AMLKKVLKQVEIIRSSRSGTPNFESQEVESNDLQLAVGQYLEVRGTAKSSRDVDARFGV- 298

Query: 1236 SESSELPSKQWLEKIRTLFISKGSGFSSRCVITGDPYIGVDVIGLPSEIAKRITFEERVT 1415
            S+     +K WLEK+RTLFI KGSGFSSR VITGD Y  V+ IG+P EIA+RITFEERV 
Sbjct: 299  SQDPNSTTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEIGVPFEIAQRITFEERVN 358

Query: 1416 EYNINHLQNIVDKRLCITYKDGSSTYAISLGSKGHTSLKVGQIINRQIIDGDIVFINRPP 1595
             +NIN+LQ +VD +LC+TY DGSS+Y++  GSKGHT L+ GQ+++R+I+DGD VFINRPP
Sbjct: 359  VHNINYLQELVDNKLCLTYSDGSSSYSLREGSKGHTFLRPGQVVHRRIMDGDTVFINRPP 418

Query: 1596 STHKHSLQAFHVYVHEDHTVKINPLICAPLGADFDGDCIHIFYPQSLSAKAEVSELFSVE 1775
            +THKHSLQA  VYVH+DHTVKINPLIC PL ADFDGDCIH+FYPQSL+AKAEV ELFSVE
Sbjct: 419  TTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFSVE 478

Query: 1776 KQLLSSHSGNMNLQLVHDSLLALKLISNLSFIGKAVAQQLSMFESPVLPSPAVIKANNHG 1955
            KQLLSSH+GN+NLQL  D+LL+LK++    F+ KA AQQL+MF    LP PA+ KA+  G
Sbjct: 479  KQLLSSHNGNLNLQLATDALLSLKVMFKKYFLDKAFAQQLAMFALSPLPRPALSKAHCSG 538

Query: 1956 PCWTFLQILQNVLPSHLNSCGDNYTIYQSEFLKFDSSRDIVQSLLTDIPTSI 2111
            P WT LQILQ+VLP   +SCGD Y I +SE L  D  RD + S++ +I TSI
Sbjct: 539  PRWTALQILQSVLPPGFDSCGDRYLIKKSEVLNGDFDRDTIPSVINEIVTSI 590


>gb|EOY19811.1| DNA-directed RNA polymerase E subunit 1, putative isoform 3
            [Theobroma cacao]
          Length = 1675

 Score =  715 bits (1846), Expect = 0.0
 Identities = 349/590 (59%), Positives = 457/590 (77%), Gaps = 4/590 (0%)
 Frame = +3

Query: 354  SSPLVLDGSVCNIKFSISTTEEIMTYSINECPISHPSQLANPFLGLPLESGRCESCGTAE 533
            SS   +DG +  I F ++T  EI T SI+  PI+H SQL+N +LGLPLE G+C +CGT+E
Sbjct: 5    SSASTVDGEIVGIGFCLATPREIFTASISGFPINHVSQLSNSYLGLPLEFGKCNACGTSE 64

Query: 534  IGNCEGHFGHIELPVPIYHPSHVSELRDILSMICLKCLRVK---KVRQGEVKGKISSISC 704
             G CEGHFG+IELP+PIYHPSH+SEL+ +LS++CLKCLR+K   +++ G +  ++ + SC
Sbjct: 65   PGKCEGHFGYIELPIPIYHPSHISELKRLLSLLCLKCLRMKNKFQIKSGSISDRLLA-SC 123

Query: 705  FYCRDLPPISVKEGKTSDGAIFLQLTVSSRTKMRESFWNFLDRFGYHYGATF-CRPLLPY 881
              C + P +S+KE KT+DGA  L+L   SR     + W FL+++G+ YG     R LLP 
Sbjct: 124  --CENAPQVSIKEVKTTDGACSLELKQPSR--QARTSWEFLEKYGFRYGDHHNTRTLLPC 179

Query: 882  EALNILKQIPEETKKALSGKGYSPQRGFIMQHLPVPPNCLCVPEINDGKCVMSSDISKSL 1061
            E + ILK+IP ET++ LSGKG+ PQ G+I+++LPVPPNCL VP+I+DG  +MSSD+S ++
Sbjct: 180  EVMEILKRIPAETRRKLSGKGFFPQEGYILRYLPVPPNCLSVPDISDGVSIMSSDLSTAM 239

Query: 1062 LKKVLNKIELIKRSRSGSPNFESHEVESNDLQLSITQYIHLRGTTKAPHDIKSRFVQGSE 1241
            LKKVL ++E+IK SRSG+PNFESHEVE+NDLQ ++ QY+ +RGT KA  +I +R+    +
Sbjct: 240  LKKVLKQVEIIKSSRSGTPNFESHEVEANDLQSAVEQYLQVRGTVKASRNIDARYGISKD 299

Query: 1242 SSELPSKQWLEKIRTLFISKGSGFSSRCVITGDPYIGVDVIGLPSEIAKRITFEERVTEY 1421
            +S+  +K WLEK+RTLFI KGSGFSSR VITGDPY  V+ IG+PSEIA+RITFEERV  +
Sbjct: 300  ASDSSTKAWLEKMRTLFIRKGSGFSSRGVITGDPYKKVNEIGIPSEIAQRITFEERVNMH 359

Query: 1422 NINHLQNIVDKRLCITYKDGSSTYAISLGSKGHTSLKVGQIINRQIIDGDIVFINRPPST 1601
            N+ +LQN+VD +LC+TY+DGSSTY++  GSKGHT L+ GQ+++R+I+DGDIVFINRPP+T
Sbjct: 360  NMRYLQNLVDNKLCLTYRDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTT 419

Query: 1602 HKHSLQAFHVYVHEDHTVKINPLICAPLGADFDGDCIHIFYPQSLSAKAEVSELFSVEKQ 1781
            HKHSLQA  VYVH+DHTVKINPLIC PL ADFDGDCIH+FYPQSL+AKAEV ELFSVEKQ
Sbjct: 420  HKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVFELFSVEKQ 479

Query: 1782 LLSSHSGNMNLQLVHDSLLALKLISNLSFIGKAVAQQLSMFESPVLPSPAVIKANNHGPC 1961
            LLSSH+GN+NLQL  DSLL+L+++       KA AQQLSMF S  LP PA +K N+ GPC
Sbjct: 480  LLSSHNGNLNLQLATDSLLSLRVMLKTLLFKKADAQQLSMFLSSALPQPAFLKGNSFGPC 539

Query: 1962 WTFLQILQNVLPSHLNSCGDNYTIYQSEFLKFDSSRDIVQSLLTDIPTSI 2111
            WT LQILQ   P+ L+  GD Y I +S+ L  D SRD++QS++ ++ TSI
Sbjct: 540  WTALQILQTAFPACLDCSGDRYLISKSDILTVDFSRDLMQSVINEVVTSI 589


>gb|EOY19809.1| DNA-directed RNA polymerase E subunit 1, putative isoform 1
            [Theobroma cacao] gi|508727913|gb|EOY19810.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            1 [Theobroma cacao]
          Length = 1788

 Score =  715 bits (1846), Expect = 0.0
 Identities = 349/590 (59%), Positives = 457/590 (77%), Gaps = 4/590 (0%)
 Frame = +3

Query: 354  SSPLVLDGSVCNIKFSISTTEEIMTYSINECPISHPSQLANPFLGLPLESGRCESCGTAE 533
            SS   +DG +  I F ++T  EI T SI+  PI+H SQL+N +LGLPLE G+C +CGT+E
Sbjct: 5    SSASTVDGEIVGIGFCLATPREIFTASISGFPINHVSQLSNSYLGLPLEFGKCNACGTSE 64

Query: 534  IGNCEGHFGHIELPVPIYHPSHVSELRDILSMICLKCLRVK---KVRQGEVKGKISSISC 704
             G CEGHFG+IELP+PIYHPSH+SEL+ +LS++CLKCLR+K   +++ G +  ++ + SC
Sbjct: 65   PGKCEGHFGYIELPIPIYHPSHISELKRLLSLLCLKCLRMKNKFQIKSGSISDRLLA-SC 123

Query: 705  FYCRDLPPISVKEGKTSDGAIFLQLTVSSRTKMRESFWNFLDRFGYHYGATF-CRPLLPY 881
              C + P +S+KE KT+DGA  L+L   SR     + W FL+++G+ YG     R LLP 
Sbjct: 124  --CENAPQVSIKEVKTTDGACSLELKQPSR--QARTSWEFLEKYGFRYGDHHNTRTLLPC 179

Query: 882  EALNILKQIPEETKKALSGKGYSPQRGFIMQHLPVPPNCLCVPEINDGKCVMSSDISKSL 1061
            E + ILK+IP ET++ LSGKG+ PQ G+I+++LPVPPNCL VP+I+DG  +MSSD+S ++
Sbjct: 180  EVMEILKRIPAETRRKLSGKGFFPQEGYILRYLPVPPNCLSVPDISDGVSIMSSDLSTAM 239

Query: 1062 LKKVLNKIELIKRSRSGSPNFESHEVESNDLQLSITQYIHLRGTTKAPHDIKSRFVQGSE 1241
            LKKVL ++E+IK SRSG+PNFESHEVE+NDLQ ++ QY+ +RGT KA  +I +R+    +
Sbjct: 240  LKKVLKQVEIIKSSRSGTPNFESHEVEANDLQSAVEQYLQVRGTVKASRNIDARYGISKD 299

Query: 1242 SSELPSKQWLEKIRTLFISKGSGFSSRCVITGDPYIGVDVIGLPSEIAKRITFEERVTEY 1421
            +S+  +K WLEK+RTLFI KGSGFSSR VITGDPY  V+ IG+PSEIA+RITFEERV  +
Sbjct: 300  ASDSSTKAWLEKMRTLFIRKGSGFSSRGVITGDPYKKVNEIGIPSEIAQRITFEERVNMH 359

Query: 1422 NINHLQNIVDKRLCITYKDGSSTYAISLGSKGHTSLKVGQIINRQIIDGDIVFINRPPST 1601
            N+ +LQN+VD +LC+TY+DGSSTY++  GSKGHT L+ GQ+++R+I+DGDIVFINRPP+T
Sbjct: 360  NMRYLQNLVDNKLCLTYRDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTT 419

Query: 1602 HKHSLQAFHVYVHEDHTVKINPLICAPLGADFDGDCIHIFYPQSLSAKAEVSELFSVEKQ 1781
            HKHSLQA  VYVH+DHTVKINPLIC PL ADFDGDCIH+FYPQSL+AKAEV ELFSVEKQ
Sbjct: 420  HKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVFELFSVEKQ 479

Query: 1782 LLSSHSGNMNLQLVHDSLLALKLISNLSFIGKAVAQQLSMFESPVLPSPAVIKANNHGPC 1961
            LLSSH+GN+NLQL  DSLL+L+++       KA AQQLSMF S  LP PA +K N+ GPC
Sbjct: 480  LLSSHNGNLNLQLATDSLLSLRVMLKTLLFKKADAQQLSMFLSSALPQPAFLKGNSFGPC 539

Query: 1962 WTFLQILQNVLPSHLNSCGDNYTIYQSEFLKFDSSRDIVQSLLTDIPTSI 2111
            WT LQILQ   P+ L+  GD Y I +S+ L  D SRD++QS++ ++ TSI
Sbjct: 540  WTALQILQTAFPACLDCSGDRYLISKSDILTVDFSRDLMQSVINEVVTSI 589


>ref|NP_001045921.1| Os02g0152800 [Oryza sativa Japonica Group]
            gi|113535452|dbj|BAF07835.1| Os02g0152800, partial [Oryza
            sativa Japonica Group]
          Length = 488

 Score =  710 bits (1832), Expect = 0.0
 Identities = 341/488 (69%), Positives = 409/488 (83%), Gaps = 3/488 (0%)
 Frame = +3

Query: 339  MENKLSSPLVLDGSVCNIKFSISTTEEIMTYSINECPISHPSQLANPFLGLPLESGRCES 518
            ME   S+  V +G++ +IK S+ST +EI TYSIN+CP++HPSQL NPFLGLPLE+G+CES
Sbjct: 1    MEEDQSAIPVAEGAIKSIKLSLSTEDEIRTYSINDCPVTHPSQLGNPFLGLPLETGKCES 60

Query: 519  CGTAEIGNCEGHFGHIELPVPIYHPSHVSELRDILSMICLKCLRVKK--VRQGEVKGKIS 692
            CG +E G CEGHFG+IELPVPIYHP HV+ELR IL+++CLKCLRVKK  V+Q E K   S
Sbjct: 61   CGASENGKCEGHFGYIELPVPIYHPCHVTELRQILNVVCLKCLRVKKGKVKQTEGKDNTS 120

Query: 693  SISCFYCRDLPPISVKEGKTSDGAIFLQLTVSSRTKMRESFWNFLDRFGYHYGAT-FCRP 869
            ++SC+YCRDLP +S+KE KT+DGA  L+L +  R  M E  WNFLD++G+H+G T  CR 
Sbjct: 121  ALSCYYCRDLPALSLKEIKTADGAFRLELKMPPRKFMTEGSWNFLDKYGFHHGGTSHCRT 180

Query: 870  LLPYEALNILKQIPEETKKALSGKGYSPQRGFIMQHLPVPPNCLCVPEINDGKCVMSSDI 1049
            LLP EALNILK+IPEETK+ L+ +GY  Q G++M++LPVPPNCL +PE  DG+ +MS DI
Sbjct: 181  LLPEEALNILKKIPEETKRKLAARGYIAQSGYVMKYLPVPPNCLYIPEFTDGQSIMSYDI 240

Query: 1050 SKSLLKKVLNKIELIKRSRSGSPNFESHEVESNDLQLSITQYIHLRGTTKAPHDIKSRFV 1229
            S SLLKKVL KIE IK+SR+GSPNFESHEVES DLQLSI QYIHLRGTT+ P D   RF 
Sbjct: 241  SISLLKKVLQKIEQIKKSRAGSPNFESHEVESCDLQLSIAQYIHLRGTTRGPQDNTKRFA 300

Query: 1230 QGSESSELPSKQWLEKIRTLFISKGSGFSSRCVITGDPYIGVDVIGLPSEIAKRITFEER 1409
              ++ S L +KQWLEK+RTLFISKGSGFSSR V+TGDPYIGVDVIGLPSE+AKRITFEE+
Sbjct: 301  ISTDPSALSTKQWLEKMRTLFISKGSGFSSRSVLTGDPYIGVDVIGLPSEVAKRITFEEQ 360

Query: 1410 VTEYNINHLQNIVDKRLCITYKDGSSTYAISLGSKGHTSLKVGQIINRQIIDGDIVFINR 1589
            VT+ N+N LQ IVDK LC+TY+DG +TYAI++GSKGHT+LKVGQ I+R+I+DGD+VF+NR
Sbjct: 361  VTDINLNRLQEIVDKGLCLTYRDGQATYAITVGSKGHTTLKVGQTISRRIVDGDVVFLNR 420

Query: 1590 PPSTHKHSLQAFHVYVHEDHTVKINPLICAPLGADFDGDCIHIFYPQSLSAKAEVSELFS 1769
            PPSTHKHSLQAF VYVHEDHTVKINPLICAP  ADFDGDC+HI+YPQSL+AKAE  ELFS
Sbjct: 421  PPSTHKHSLQAFRVYVHEDHTVKINPLICAPFAADFDGDCVHIYYPQSLAAKAEALELFS 480

Query: 1770 VEKQLLSS 1793
            VEKQL SS
Sbjct: 481  VEKQLTSS 488


>ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Citrus
            sinensis]
          Length = 1865

 Score =  709 bits (1830), Expect = 0.0
 Identities = 350/592 (59%), Positives = 453/592 (76%), Gaps = 1/592 (0%)
 Frame = +3

Query: 339  MENKLSSPLVLDGSVCNIKFSISTTEEIMTYSINECPISHPSQLANPFLGLPLESGRCES 518
            ME   SS  +L+G +  I+F ++T +EI T SI++C ISH SQLANPFLGLPLE G+CES
Sbjct: 1    MEENTSST-ILEGQIVGIRFGLATQKEICTASISDCSISHASQLANPFLGLPLEFGKCES 59

Query: 519  CGTAEIGNCEGHFGHIELPVPIYHPSHVSELRDILSMICLKCLRVKKVR-QGEVKGKISS 695
            CGT+E G CEGHFG+IELP+PIYHPSH+SEL+ +LS++CLKCL++K  + Q +  G    
Sbjct: 60   CGTSEPGKCEGHFGYIELPIPIYHPSHISELKHMLSLLCLKCLKMKSTKFQIKNDGVAQR 119

Query: 696  ISCFYCRDLPPISVKEGKTSDGAIFLQLTVSSRTKMRESFWNFLDRFGYHYGATFCRPLL 875
            +    C +   +S+ + KT+DGA +L+L + S+ ++   FWNFL+R+G+ YG +  R LL
Sbjct: 120  LLSSCCEEASQVSIVDVKTTDGAFYLELKLPSKFRLCAGFWNFLERYGFRYGDSLTRTLL 179

Query: 876  PYEALNILKQIPEETKKALSGKGYSPQRGFIMQHLPVPPNCLCVPEINDGKCVMSSDISK 1055
              E   +LK+IPEET+K L+GKGY PQ G+I+++LPVPPNCL VP+I+DG   MSSD+S 
Sbjct: 180  ASEVKEMLKRIPEETRKKLAGKGYFPQDGYILEYLPVPPNCLSVPDISDGVSTMSSDLSI 239

Query: 1056 SLLKKVLNKIELIKRSRSGSPNFESHEVESNDLQLSITQYIHLRGTTKAPHDIKSRFVQG 1235
            ++LKKVL ++E+I+ SRSG+PNFES EVESNDLQL++ QY+ +RGT K+  D+ +RF   
Sbjct: 240  AMLKKVLKQVEIIRSSRSGTPNFESQEVESNDLQLAVGQYLEVRGTAKSSRDVDARFGV- 298

Query: 1236 SESSELPSKQWLEKIRTLFISKGSGFSSRCVITGDPYIGVDVIGLPSEIAKRITFEERVT 1415
            S+     +K WLEK+RTLFI KGSGFSSR VITGD Y  V+ IG+P EIA+RITFEERV 
Sbjct: 299  SQDPNSTTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEIGVPFEIAQRITFEERVN 358

Query: 1416 EYNINHLQNIVDKRLCITYKDGSSTYAISLGSKGHTSLKVGQIINRQIIDGDIVFINRPP 1595
             +NIN+LQ +VD +LC+TY DGSS+Y++  GSKGHT L+ GQ+++R+I+DGD VFINRPP
Sbjct: 359  VHNINYLQELVDNKLCLTYSDGSSSYSLREGSKGHTFLRPGQVVHRRIMDGDTVFINRPP 418

Query: 1596 STHKHSLQAFHVYVHEDHTVKINPLICAPLGADFDGDCIHIFYPQSLSAKAEVSELFSVE 1775
            +THKHSLQA  VYVH+DHTVKINPLIC PL ADFDGDCIH+FYPQSL+AKAEV ELFSVE
Sbjct: 419  TTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFSVE 478

Query: 1776 KQLLSSHSGNMNLQLVHDSLLALKLISNLSFIGKAVAQQLSMFESPVLPSPAVIKANNHG 1955
            KQLLSSH+GN+NLQL  D+LL+LK++    F+ KA  QQL+MF    LP PA+ KA    
Sbjct: 479  KQLLSSHNGNLNLQLATDALLSLKVMFKKYFLDKAFTQQLAMFALSPLPRPALSKARCSA 538

Query: 1956 PCWTFLQILQNVLPSHLNSCGDNYTIYQSEFLKFDSSRDIVQSLLTDIPTSI 2111
              WT LQILQ+VLP   +SCGD Y I +SE LK D  RD + S++ +I TSI
Sbjct: 539  R-WTALQILQSVLPPGFDSCGDRYLIKKSEVLKGDFDRDTIPSVINEIVTSI 589


>ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine max]
          Length = 2020

 Score =  708 bits (1827), Expect = 0.0
 Identities = 345/585 (58%), Positives = 448/585 (76%), Gaps = 3/585 (0%)
 Frame = +3

Query: 366  VLDGSVCNIKFSISTTEEIMTYSINECPISHPSQLANPFLGLPLESGRCESCGTAEIGNC 545
            VLDG+V  IKF ++T +EI T SI+E  ISH SQL+NPFLGLPLE GRCESCGT+E+G C
Sbjct: 9    VLDGTVVGIKFGMATRQEICTASISESSISHASQLSNPFLGLPLEFGRCESCGTSEVGKC 68

Query: 546  EGHFGHIELPVPIYHPSHVSELRDILSMICLKCLRVKKVR-QGEVKGKISSISCFYCRDL 722
            EGHFG++ELPVPIYHPSH+SEL+ +LS++CL CL+++K +      G    +    C+D+
Sbjct: 69   EGHFGYVELPVPIYHPSHISELKRMLSVVCLNCLKMRKTKFPASSSGLAQRLISPCCQDV 128

Query: 723  PP--ISVKEGKTSDGAIFLQLTVSSRTKMRESFWNFLDRFGYHYGATFCRPLLPYEALNI 896
                +S++E KTSDGA +L L VS ++K+ + FW+FL+++GY Y     R LLP EA+ I
Sbjct: 129  NAALVSIREVKTSDGACYLALKVS-KSKIHDGFWSFLEKYGYRYEGDETRALLPCEAMEI 187

Query: 897  LKQIPEETKKALSGKGYSPQRGFIMQHLPVPPNCLCVPEINDGKCVMSSDISKSLLKKVL 1076
            +K+IP ETKK L+GKG+ PQ G+++++LPVPPNCL VPE++DG  VMSSD S ++L+K+L
Sbjct: 188  IKRIPIETKKKLAGKGFFPQDGYVLKYLPVPPNCLSVPEVSDGASVMSSDPSMTILRKLL 247

Query: 1077 NKIELIKRSRSGSPNFESHEVESNDLQLSITQYIHLRGTTKAPHDIKSRFVQGSESSELP 1256
             K+E+IK SRSG PNFESH VE+NDLQ  + QY  +RGT+K   DI++ F    E +   
Sbjct: 248  RKVEIIKSSRSGEPNFESHHVEANDLQSVVDQYFQIRGTSKPARDIETHFGVNKELTASS 307

Query: 1257 SKQWLEKIRTLFISKGSGFSSRCVITGDPYIGVDVIGLPSEIAKRITFEERVTEYNINHL 1436
            +K WLEK+RTLFI KGSGFSSR VITGD Y  ++ +G+P E+A+RITFEERV  +NI +L
Sbjct: 308  TKAWLEKMRTLFIRKGSGFSSRNVITGDCYKRINEVGIPVEVAQRITFEERVNIHNIRYL 367

Query: 1437 QNIVDKRLCITYKDGSSTYAISLGSKGHTSLKVGQIINRQIIDGDIVFINRPPSTHKHSL 1616
            Q +VD+ LC+TYK+G STY++  GSKGH  LK GQI++R+I+DGDIVFINRPP+THKHSL
Sbjct: 368  QKLVDEHLCLTYKEGVSTYSLREGSKGHIYLKPGQIVHRRIMDGDIVFINRPPTTHKHSL 427

Query: 1617 QAFHVYVHEDHTVKINPLICAPLGADFDGDCIHIFYPQSLSAKAEVSELFSVEKQLLSSH 1796
            QA +VY+HEDHTVKINPLIC PLGADFDGDC+H+FYPQSL+AKAEV ELF+VE QLLSSH
Sbjct: 428  QALYVYIHEDHTVKINPLICGPLGADFDGDCVHLFYPQSLAAKAEVVELFAVENQLLSSH 487

Query: 1797 SGNMNLQLVHDSLLALKLISNLSFIGKAVAQQLSMFESPVLPSPAVIKANNHGPCWTFLQ 1976
            SGN+NLQL  DSLLALK++    F+G+A A QL+MF    LP PA++KA++   CWT +Q
Sbjct: 488  SGNLNLQLSTDSLLALKMLVKRCFLGRAAANQLAMFLLLPLPRPALLKASSDDACWTSIQ 547

Query: 1977 ILQNVLPSHLNSCGDNYTIYQSEFLKFDSSRDIVQSLLTDIPTSI 2111
            ILQ  LP   +  G  Y I QSE L+FD SRD + + + +I  SI
Sbjct: 548  ILQGALPMGFDCTGGRYLIRQSEILEFDFSRDALPATINEIAASI 592


>ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit
            1-like [Cucumis sativus]
          Length = 2019

 Score =  707 bits (1824), Expect = 0.0
 Identities = 349/618 (56%), Positives = 454/618 (73%), Gaps = 27/618 (4%)
 Frame = +3

Query: 339  MENKLSSPLVLDGSVCNIKFSISTTEEIMTYSINECPISHPSQLANPFLGLPLESGRCES 518
            ME   S   +LD  +  I+FS++  +EI   +I++CPI+H SQL+NPFLGLP+E G+CES
Sbjct: 1    MEEAPSCSSILDAEIVGIRFSLANGQEICIAAISDCPITHASQLSNPFLGLPIEFGKCES 60

Query: 519  CGTAEIGNCEG--------------------------HFGHIELPVPIYHPSHVSELRDI 620
            CGT+E G CEG                          HFG+IELP+PIYHP+H++EL+ +
Sbjct: 61   CGTSEPGKCEGIDFFFXIFNVLHNTTXQVVFIFHLSGHFGYIELPIPIYHPNHITELKKM 120

Query: 621  LSMICLKCLRVKKVR-QGEVKGKISSISCFYCRDLPPISVKEGKTSDGAIFLQLTVSSRT 797
            LS++CLKCL++KK +   +  G    +    C D   ++++E K +DGA +LQL V SRT
Sbjct: 121  LSLLCLKCLKMKKTKFPSKNIGFAERLLSSCCEDASQVTIREAKKADGASYLQLKVPSRT 180

Query: 798  KMRESFWNFLDRFGYHYGATFCRPLLPYEALNILKQIPEETKKALSGKGYSPQRGFIMQH 977
             ++E FW+FL+R+G+ YG  F R LL      +LK+IP ET+K L+G+GY PQ G+I+Q+
Sbjct: 181  SLQERFWDFLERYGFRYGDNFTRTLLSVMVKEMLKKIPNETRKKLAGRGYYPQDGYILQY 240

Query: 978  LPVPPNCLCVPEINDGKCVMSSDISKSLLKKVLNKIELIKRSRSGSPNFESHEVESNDLQ 1157
            LPVPPNCL VPEI+DG  VMSSD + S+LKK+L ++E+IK SRSG+PNFESHEVE+NDLQ
Sbjct: 241  LPVPPNCLSVPEISDGVTVMSSDPAVSMLKKILKQVEIIKGSRSGAPNFESHEVEANDLQ 300

Query: 1158 LSITQYIHLRGTTKAPHDIKSRFVQGSESSELPSKQWLEKIRTLFISKGSGFSSRCVITG 1337
            L++ QY+ +RGT KA   I +RF    E ++  +K WLEK+RTLFI KGSGFSSR VITG
Sbjct: 301  LAVDQYLQVRGTVKASRGIDARFGVNKELNDPSTKAWLEKMRTLFIRKGSGFSSRSVITG 360

Query: 1338 DPYIGVDVIGLPSEIAKRITFEERVTEYNINHLQNIVDKRLCITYKDGSSTYAISLGSKG 1517
            D Y  V+ IG+P E+A+RITFEERV+ +NI +LQ +VDK+LC+TY+DGSS Y++  GS G
Sbjct: 361  DAYKLVNEIGVPFEVAQRITFEERVSVHNIRYLQELVDKKLCLTYRDGSSAYSLREGSMG 420

Query: 1518 HTSLKVGQIINRQIIDGDIVFINRPPSTHKHSLQAFHVYVHEDHTVKINPLICAPLGADF 1697
            HT LK GQI++R+I+DGDIVFINRPP+THKHSLQA  VY+H+DH VKINPLIC PL ADF
Sbjct: 421  HTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALRVYLHDDHVVKINPLICGPLSADF 480

Query: 1698 DGDCIHIFYPQSLSAKAEVSELFSVEKQLLSSHSGNMNLQLVHDSLLALKLISNLSFIGK 1877
            DGDCIH+FYPQS++AKAEV  LFSVEKQLLSSHSGN+NLQL +DSLL+LK++    F+GK
Sbjct: 481  DGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHSGNLNLQLANDSLLSLKMMFRKYFLGK 540

Query: 1878 AVAQQLSMFESPVLPSPAVIKANNHGPCWTFLQILQNVLPSHLNSCGDNYTIYQSEFLKF 2057
            A AQQL+MF S  LP PA++   +    WT LQILQ VLP+  +  GD+Y I  S FLKF
Sbjct: 541  AAAQQLAMFVSSYLPPPALLGVRSGSLHWTALQILQTVLPASFDCHGDSYLIKNSNFLKF 600

Query: 2058 DSSRDIVQSLLTDIPTSI 2111
            D  RD + SL+ +I TSI
Sbjct: 601  DFDRDAMPSLINEILTSI 618


>ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine max]
          Length = 2082

 Score =  704 bits (1818), Expect = 0.0
 Identities = 343/585 (58%), Positives = 447/585 (76%), Gaps = 3/585 (0%)
 Frame = +3

Query: 366  VLDGSVCNIKFSISTTEEIMTYSINECPISHPSQLANPFLGLPLESGRCESCGTAEIGNC 545
            VLDG+V  IKF ++T +EI T SI++  ISH SQL+NPFLGLPLE GRCESCGT+E+G C
Sbjct: 9    VLDGTVVGIKFGMATRQEICTASISDSSISHASQLSNPFLGLPLEFGRCESCGTSEVGKC 68

Query: 546  EGHFGHIELPVPIYHPSHVSELRDILSMICLKCLRVKKVR-QGEVKGKISSISCFYCRD- 719
            EGHFG+IELP+PIYHPSH+S+L+ +LSM+CL CL+++K +      G    +    C++ 
Sbjct: 69   EGHFGYIELPIPIYHPSHISDLKRMLSMVCLNCLKLRKTKLPASSSGLAQRLISPCCQED 128

Query: 720  -LPPISVKEGKTSDGAIFLQLTVSSRTKMRESFWNFLDRFGYHYGATFCRPLLPYEALNI 896
                +S++E KTSDGA +L L VS ++KM+  FW+FL+++GY YG    R LLP EA+ I
Sbjct: 129  KAALVSIREVKTSDGACYLALKVS-KSKMQNGFWSFLEKYGYRYGGDHTRALLPCEAMEI 187

Query: 897  LKQIPEETKKALSGKGYSPQRGFIMQHLPVPPNCLCVPEINDGKCVMSSDISKSLLKKVL 1076
            +K+IP ETKK L+GKGY PQ G+++++LPVPPNCL VPE++DG  VMSSD S ++L+K+L
Sbjct: 188  IKRIPIETKKKLAGKGYFPQDGYVLKYLPVPPNCLSVPEVSDGVSVMSSDPSITILRKLL 247

Query: 1077 NKIELIKRSRSGSPNFESHEVESNDLQLSITQYIHLRGTTKAPHDIKSRFVQGSESSELP 1256
             K+E+IK SRSG PNFESH VE+NDLQ  + QY  +RGT+K   DI++ F    E +   
Sbjct: 248  RKVEIIKSSRSGEPNFESHHVEANDLQSVVDQYFQIRGTSKPARDIETHFGVNKELTASS 307

Query: 1257 SKQWLEKIRTLFISKGSGFSSRCVITGDPYIGVDVIGLPSEIAKRITFEERVTEYNINHL 1436
            +K WLEK+RTLFI KGSGFSSR VITGD Y  ++ +G+P E+A+RITFEERV  +NI +L
Sbjct: 308  TKAWLEKMRTLFIRKGSGFSSRNVITGDCYKRINEVGIPVEVAQRITFEERVNIHNIRYL 367

Query: 1437 QNIVDKRLCITYKDGSSTYAISLGSKGHTSLKVGQIINRQIIDGDIVFINRPPSTHKHSL 1616
            Q +VD+ LC+TYK+G STY++  GSKGH  LK GQI++R+I+DGDIVFINRPP+THKHSL
Sbjct: 368  QKLVDEHLCLTYKEGGSTYSLREGSKGHIYLKPGQIVHRRIMDGDIVFINRPPTTHKHSL 427

Query: 1617 QAFHVYVHEDHTVKINPLICAPLGADFDGDCIHIFYPQSLSAKAEVSELFSVEKQLLSSH 1796
            QA +VY+HEDHTVKINPLIC PLGADFDGDC+H+FYPQSL+AKAEV ELFSVE QLLSSH
Sbjct: 428  QALYVYIHEDHTVKINPLICGPLGADFDGDCVHLFYPQSLAAKAEVVELFSVENQLLSSH 487

Query: 1797 SGNMNLQLVHDSLLALKLISNLSFIGKAVAQQLSMFESPVLPSPAVIKANNHGPCWTFLQ 1976
            SGN+NLQL  DSLL+LK++    F  +A A QL+MF    LP PA++KA++   CWT +Q
Sbjct: 488  SGNLNLQLSTDSLLSLKMLVKRCFFDRAAANQLAMFILLPLPRPALLKASSGDACWTSIQ 547

Query: 1977 ILQNVLPSHLNSCGDNYTIYQSEFLKFDSSRDIVQSLLTDIPTSI 2111
            ILQ  LP   +  G  Y I QSE L+F+ SRD++ + + +I  S+
Sbjct: 548  ILQCALPLGFDCTGGRYLIRQSEILEFEFSRDVLPATVNEIAASV 592


>gb|EPS67715.1| hypothetical protein M569_07058, partial [Genlisea aurea]
          Length = 1379

 Score =  702 bits (1813), Expect = 0.0
 Identities = 342/591 (57%), Positives = 448/591 (75%)
 Frame = +3

Query: 339  MENKLSSPLVLDGSVCNIKFSISTTEEIMTYSINECPISHPSQLANPFLGLPLESGRCES 518
            MEN  S   V +G +  I F ++T +EI   SI++CPI+H SQL+NPFLGLPL+SG+CES
Sbjct: 1    MENS-SVATVPEGMISGISFGLATFQEICKSSISDCPITHASQLSNPFLGLPLDSGKCES 59

Query: 519  CGTAEIGNCEGHFGHIELPVPIYHPSHVSELRDILSMICLKCLRVKKVRQGEVKGKISSI 698
            CGT E G CEGHFG+IE P PIYHP H++EL+ +LS++CLKCL++K  R+ +  G +  +
Sbjct: 60   CGTGEPGQCEGHFGYIEFPTPIYHPDHITELKKMLSLLCLKCLKLK-TRKVKNIGAMERM 118

Query: 699  SCFYCRDLPPISVKEGKTSDGAIFLQLTVSSRTKMRESFWNFLDRFGYHYGATFCRPLLP 878
                C +   I+V E KTSDGA +L+L V  ++K+RE +WNFL++ G+ YG T+ RPLLP
Sbjct: 119  LMSCCEETSQITVYETKTSDGASYLELKVPPKSKLREGYWNFLEKHGFRYGHTYSRPLLP 178

Query: 879  YEALNILKQIPEETKKALSGKGYSPQRGFIMQHLPVPPNCLCVPEINDGKCVMSSDISKS 1058
             E ++ILK++P+ETKK+L  +GY PQ G++++ LPVPPNCLCVP+I+DG   MS D S +
Sbjct: 179  SEVMSILKKLPKETKKSLLSRGYFPQEGYVLRFLPVPPNCLCVPDISDGVSTMSKDYSIT 238

Query: 1059 LLKKVLNKIELIKRSRSGSPNFESHEVESNDLQLSITQYIHLRGTTKAPHDIKSRFVQGS 1238
            LLKKVL ++E+IK SRSG PNFESHE+E+N+LQ S++QY+  RGT KA  D+ SRF    
Sbjct: 239  LLKKVLRQVEVIKNSRSGMPNFESHEIEANELQASVSQYLQFRGTGKAARDVDSRFGVHK 298

Query: 1239 ESSELPSKQWLEKIRTLFISKGSGFSSRCVITGDPYIGVDVIGLPSEIAKRITFEERVTE 1418
            E +   +K WLEK++TLFI KGSGFSSR V+TGD + GV  IGLP EIA++ITFEERV  
Sbjct: 299  EINSSSTKAWLEKMKTLFIRKGSGFSSRSVVTGDAFKGVSEIGLPYEIAQKITFEERVNV 358

Query: 1419 YNINHLQNIVDKRLCITYKDGSSTYAISLGSKGHTSLKVGQIINRQIIDGDIVFINRPPS 1598
            +NI+ LQ +VD++LC+TY+DGSSTY++  GSKGHT LK GQI++R+I+DGD+ FINRPP+
Sbjct: 359  HNIDFLQKLVDEKLCLTYRDGSSTYSLREGSKGHTFLKPGQIVHRRIMDGDLAFINRPPT 418

Query: 1599 THKHSLQAFHVYVHEDHTVKINPLICAPLGADFDGDCIHIFYPQSLSAKAEVSELFSVEK 1778
            THKHSLQA  VYVH+ HTVKINPLIC PL ADFDGDCIH+FYPQSL A+AEV ELFSVEK
Sbjct: 419  THKHSLQALSVYVHDGHTVKINPLICGPLAADFDGDCIHLFYPQSLEARAEVVELFSVEK 478

Query: 1779 QLLSSHSGNMNLQLVHDSLLALKLISNLSFIGKAVAQQLSMFESPVLPSPAVIKANNHGP 1958
            QLLSSH+GN NLQL  DSLL+LK++    F+ K  AQQL+MF + +L  PAV+K +  GP
Sbjct: 479  QLLSSHTGNFNLQLTTDSLLSLKILFGNHFLRKKAAQQLAMFVN-MLAGPAVVK-SKIGP 536

Query: 1959 CWTFLQILQNVLPSHLNSCGDNYTIYQSEFLKFDSSRDIVQSLLTDIPTSI 2111
             WT  QILQ  LPS     G+ + I +SE L  D  RD++ +++ D+ TS+
Sbjct: 537  LWTASQILQATLPSSFGCSGERHLIAKSEVLNLDVDRDLMTAVVNDLVTSL 587