BLASTX nr result
ID: Zingiber23_contig00035186
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00035186
(374 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006660876.1| PREDICTED: mediator of RNA polymerase II tra... 65 7e-09
ref|XP_002460557.1| hypothetical protein SORBIDRAFT_02g030650 [S... 65 7e-09
ref|XP_004957432.1| PREDICTED: mediator of RNA polymerase II tra... 65 9e-09
ref|XP_002527873.1| nut2, putative [Ricinus communis] gi|2235327... 65 9e-09
ref|XP_006476288.1| PREDICTED: mediator of RNA polymerase II tra... 64 2e-08
ref|XP_006439221.1| hypothetical protein CICLE_v10022441mg [Citr... 64 2e-08
gb|EOY23890.1| Mediator complex, subunit Med10 isoform 1 [Theobr... 64 2e-08
ref|NP_973916.1| Mediator complex, subunit Med10 [Arabidopsis th... 64 2e-08
tpg|DAA40596.1| TPA: hypothetical protein ZEAMMB73_822884 [Zea m... 64 2e-08
tpg|DAA40595.1| TPA: hypothetical protein ZEAMMB73_822884 [Zea m... 64 2e-08
ref|XP_002299427.1| RNA polymerase II mediator complex family pr... 64 2e-08
ref|NP_001150529.1| mediator complex subunit 10 CG5057-PA [Zea m... 64 2e-08
ref|NP_564254.1| Mediator complex, subunit Med10 [Arabidopsis th... 64 2e-08
ref|XP_006415945.1| hypothetical protein EUTSA_v10008848mg [Eutr... 64 3e-08
gb|EMJ19676.1| hypothetical protein PRUPE_ppa012016mg [Prunus pe... 64 3e-08
ref|XP_002868569.1| hypothetical protein ARALYDRAFT_493793 [Arab... 64 3e-08
ref|XP_002303692.1| RNA polymerase II mediator complex family pr... 64 3e-08
ref|NP_001063737.1| Os09g0528300 [Oryza sativa Japonica Group] g... 64 3e-08
ref|XP_006849160.1| hypothetical protein AMTR_s00027p00143800 [A... 63 4e-08
ref|XP_006305653.1| hypothetical protein CARUB_v10010356mg [Caps... 63 4e-08
>ref|XP_006660876.1| PREDICTED: mediator of RNA polymerase II transcription subunit
10b-like [Oryza brachyantha]
Length = 189
Score = 65.5 bits (158), Expect = 7e-09
Identities = 36/60 (60%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Frame = -1
Query: 374 GKTDAFKSLRKNLLEELDHAFPDEVDMYREI-XXXXXXXXXXAQSLQTLQNGDVKLKSEY 198
GKTDAFKSLRK+LLEEL+ AFP++V+ YREI AQS TL NGDVK+K E+
Sbjct: 130 GKTDAFKSLRKHLLEELEQAFPEDVEAYREIRATSAAESKRLAQSQSTLPNGDVKVKPEH 189
>ref|XP_002460557.1| hypothetical protein SORBIDRAFT_02g030650 [Sorghum bicolor]
gi|241923934|gb|EER97078.1| hypothetical protein
SORBIDRAFT_02g030650 [Sorghum bicolor]
Length = 188
Score = 65.5 bits (158), Expect = 7e-09
Identities = 36/60 (60%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Frame = -1
Query: 374 GKTDAFKSLRKNLLEELDHAFPDEVDMYREI-XXXXXXXXXXAQSLQTLQNGDVKLKSEY 198
GKTDAFKSLRK+LLEEL+ AFP++V+ YREI AQS TL NGDVK+K+E+
Sbjct: 129 GKTDAFKSLRKHLLEELEQAFPEDVEAYREIRATSAAEAKRLAQSQGTLPNGDVKVKAEH 188
>ref|XP_004957432.1| PREDICTED: mediator of RNA polymerase II transcription subunit
10b-like [Setaria italica]
Length = 188
Score = 65.1 bits (157), Expect = 9e-09
Identities = 35/60 (58%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Frame = -1
Query: 374 GKTDAFKSLRKNLLEELDHAFPDEVDMYREI-XXXXXXXXXXAQSLQTLQNGDVKLKSEY 198
GKTDAFKSLRK+LLEEL+ AFP++V+ YREI AQS +L NGDVK+K+E+
Sbjct: 129 GKTDAFKSLRKHLLEELEQAFPEDVEQYREIRATSAAEAKRLAQSQSSLPNGDVKVKAEH 188
>ref|XP_002527873.1| nut2, putative [Ricinus communis] gi|223532724|gb|EEF34504.1| nut2,
putative [Ricinus communis]
Length = 187
Score = 65.1 bits (157), Expect = 9e-09
Identities = 36/59 (61%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Frame = -1
Query: 374 GKTDAFKSLRKNLLEELDHAFPDEVDMYREI-XXXXXXXXXXAQSLQTLQNGDVKLKSE 201
GKTDAFK LRK+LLEEL+ AFPDEV+ YREI AQ+ +L NGDVK+KSE
Sbjct: 128 GKTDAFKGLRKHLLEELEQAFPDEVESYREIRAISAAESKRLAQAQSSLPNGDVKVKSE 186
>ref|XP_006476288.1| PREDICTED: mediator of RNA polymerase II transcription subunit
10b-like isoform X1 [Citrus sinensis]
gi|568844841|ref|XP_006476289.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 10b-like isoform
X2 [Citrus sinensis]
Length = 186
Score = 64.3 bits (155), Expect = 2e-08
Identities = 36/59 (61%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Frame = -1
Query: 374 GKTDAFKSLRKNLLEELDHAFPDEVDMYREI-XXXXXXXXXXAQSLQTLQNGDVKLKSE 201
GKTDAFKSLRK+LL+EL+ FPDEV+ YREI AQS L NGDVK+KSE
Sbjct: 127 GKTDAFKSLRKHLLDELEQTFPDEVEAYREIRANSAAEAKRLAQSQSMLPNGDVKVKSE 185
>ref|XP_006439221.1| hypothetical protein CICLE_v10022441mg [Citrus clementina]
gi|557541483|gb|ESR52461.1| hypothetical protein
CICLE_v10022441mg [Citrus clementina]
Length = 186
Score = 64.3 bits (155), Expect = 2e-08
Identities = 36/59 (61%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Frame = -1
Query: 374 GKTDAFKSLRKNLLEELDHAFPDEVDMYREI-XXXXXXXXXXAQSLQTLQNGDVKLKSE 201
GKTDAFKSLRK+LL+EL+ FPDEV+ YREI AQS L NGDVK+KSE
Sbjct: 127 GKTDAFKSLRKHLLDELEQTFPDEVEAYREIRANSAAEAKRLAQSQSMLPNGDVKVKSE 185
>gb|EOY23890.1| Mediator complex, subunit Med10 isoform 1 [Theobroma cacao]
Length = 190
Score = 64.3 bits (155), Expect = 2e-08
Identities = 36/59 (61%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Frame = -1
Query: 374 GKTDAFKSLRKNLLEELDHAFPDEVDMYREI-XXXXXXXXXXAQSLQTLQNGDVKLKSE 201
GKTDAFKSLRK+LLEEL+ FPDEV+ YREI AQS L NGDVK+K+E
Sbjct: 131 GKTDAFKSLRKHLLEELEQTFPDEVESYREIRASSAAECKRLAQSQSMLPNGDVKVKTE 189
>ref|NP_973916.1| Mediator complex, subunit Med10 [Arabidopsis thaliana]
gi|395406775|sp|F4HPA7.1|MD10B_ARATH RecName:
Full=Mediator of RNA polymerase II transcription subunit
10b gi|332192596|gb|AEE30717.1| Mediator complex,
subunit Med10 [Arabidopsis thaliana]
Length = 189
Score = 63.9 bits (154), Expect = 2e-08
Identities = 35/59 (59%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Frame = -1
Query: 374 GKTDAFKSLRKNLLEELDHAFPDEVDMYREI-XXXXXXXXXXAQSLQTLQNGDVKLKSE 201
GKTDAFK LRK++LEEL+ FPDEVDMYREI AQS L NGD K+K+E
Sbjct: 130 GKTDAFKDLRKHILEELEQNFPDEVDMYREIRASSAAVTKRLAQSQSVLPNGDAKVKNE 188
>tpg|DAA40596.1| TPA: hypothetical protein ZEAMMB73_822884 [Zea mays]
Length = 105
Score = 63.9 bits (154), Expect = 2e-08
Identities = 35/60 (58%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Frame = -1
Query: 374 GKTDAFKSLRKNLLEELDHAFPDEVDMYREI-XXXXXXXXXXAQSLQTLQNGDVKLKSEY 198
GKTDAFK LRK+LLEEL+ AFP++V+ YREI AQS TL NGDVK+K+E+
Sbjct: 46 GKTDAFKGLRKHLLEELEQAFPEDVEAYREIRATSAAEAKRLAQSQGTLPNGDVKVKAEH 105
>tpg|DAA40595.1| TPA: hypothetical protein ZEAMMB73_822884 [Zea mays]
Length = 107
Score = 63.9 bits (154), Expect = 2e-08
Identities = 35/60 (58%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Frame = -1
Query: 374 GKTDAFKSLRKNLLEELDHAFPDEVDMYREI-XXXXXXXXXXAQSLQTLQNGDVKLKSEY 198
GKTDAFK LRK+LLEEL+ AFP++V+ YREI AQS TL NGDVK+K+E+
Sbjct: 48 GKTDAFKGLRKHLLEELEQAFPEDVEAYREIRATSAAEAKRLAQSQGTLPNGDVKVKAEH 107
>ref|XP_002299427.1| RNA polymerase II mediator complex family protein [Populus
trichocarpa] gi|222846685|gb|EEE84232.1| RNA polymerase
II mediator complex family protein [Populus trichocarpa]
Length = 190
Score = 63.9 bits (154), Expect = 2e-08
Identities = 35/59 (59%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Frame = -1
Query: 374 GKTDAFKSLRKNLLEELDHAFPDEVDMYREI-XXXXXXXXXXAQSLQTLQNGDVKLKSE 201
GKTDAFKSLRK+LLEEL+ FPDEV+ YREI AQ+ +L NGDVK+K+E
Sbjct: 131 GKTDAFKSLRKHLLEELEQTFPDEVESYREIRAMSAAEAKRLAQAQSSLPNGDVKVKAE 189
>ref|NP_001150529.1| mediator complex subunit 10 CG5057-PA [Zea mays]
gi|195621856|gb|ACG32758.1| mediator complex subunit 10
CG5057-PA [Zea mays] gi|195639908|gb|ACG39422.1|
mediator complex subunit 10 CG5057-PA [Zea mays]
gi|414590023|tpg|DAA40594.1| TPA: mediator complex
subunit 10 CG5057-PA [Zea mays]
Length = 190
Score = 63.9 bits (154), Expect = 2e-08
Identities = 35/60 (58%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Frame = -1
Query: 374 GKTDAFKSLRKNLLEELDHAFPDEVDMYREI-XXXXXXXXXXAQSLQTLQNGDVKLKSEY 198
GKTDAFK LRK+LLEEL+ AFP++V+ YREI AQS TL NGDVK+K+E+
Sbjct: 131 GKTDAFKGLRKHLLEELEQAFPEDVEAYREIRATSAAEAKRLAQSQGTLPNGDVKVKAEH 190
>ref|NP_564254.1| Mediator complex, subunit Med10 [Arabidopsis thaliana]
gi|13926327|gb|AAK49628.1|AF372912_1 At1g26660/T24P13_4
[Arabidopsis thaliana] gi|16323258|gb|AAL15363.1|
At1g26660/T24P13_4 [Arabidopsis thaliana]
gi|332192597|gb|AEE30718.1| Mediator complex, subunit
Med10 [Arabidopsis thaliana]
Length = 189
Score = 63.9 bits (154), Expect = 2e-08
Identities = 35/59 (59%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Frame = -1
Query: 374 GKTDAFKSLRKNLLEELDHAFPDEVDMYREI-XXXXXXXXXXAQSLQTLQNGDVKLKSE 201
GKTDAFK LRK++LEEL+ FPDEVDMYREI AQS L NGD K+K+E
Sbjct: 130 GKTDAFKDLRKHILEELEQNFPDEVDMYREIRASSAAEAKRLAQSQSVLPNGDAKVKNE 188
>ref|XP_006415945.1| hypothetical protein EUTSA_v10008848mg [Eutrema salsugineum]
gi|557093716|gb|ESQ34298.1| hypothetical protein
EUTSA_v10008848mg [Eutrema salsugineum]
Length = 191
Score = 63.5 bits (153), Expect = 3e-08
Identities = 34/59 (57%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Frame = -1
Query: 374 GKTDAFKSLRKNLLEELDHAFPDEVDMYREIXXXXXXXXXXAQSLQT-LQNGDVKLKSE 201
GKTDAFK LRK++LEEL+ FPDEVD YREI QT L NGD K+KSE
Sbjct: 132 GKTDAFKDLRKHILEELEQTFPDEVDKYREIRASSAAEAKRLAQSQTVLPNGDAKVKSE 190
>gb|EMJ19676.1| hypothetical protein PRUPE_ppa012016mg [Prunus persica]
Length = 187
Score = 63.5 bits (153), Expect = 3e-08
Identities = 34/59 (57%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Frame = -1
Query: 374 GKTDAFKSLRKNLLEELDHAFPDEVDMYREIXXXXXXXXXXAQSLQT-LQNGDVKLKSE 201
GKTD FKSLRK+LLEEL+ FPDEV+ YREI Q+ LQNGDVK+K E
Sbjct: 128 GKTDTFKSLRKHLLEELEQTFPDEVESYREIRAASAAETKRLAQAQSILQNGDVKVKPE 186
>ref|XP_002868569.1| hypothetical protein ARALYDRAFT_493793 [Arabidopsis lyrata subsp.
lyrata] gi|297314405|gb|EFH44828.1| hypothetical protein
ARALYDRAFT_493793 [Arabidopsis lyrata subsp. lyrata]
Length = 178
Score = 63.5 bits (153), Expect = 3e-08
Identities = 36/59 (61%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Frame = -1
Query: 374 GKTDAFKSLRKNLLEELDHAFPDEVDMYREI-XXXXXXXXXXAQSLQTLQNGDVKLKSE 201
GKTDAFK LRK+LLEEL+ FPDEVD YREI AQS L NGD K+KSE
Sbjct: 119 GKTDAFKGLRKHLLEELEQTFPDEVDTYREIRASYAAEAKRLAQSQSVLPNGDPKVKSE 177
>ref|XP_002303692.1| RNA polymerase II mediator complex family protein [Populus
trichocarpa] gi|222841124|gb|EEE78671.1| RNA polymerase
II mediator complex family protein [Populus trichocarpa]
Length = 185
Score = 63.5 bits (153), Expect = 3e-08
Identities = 35/60 (58%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Frame = -1
Query: 374 GKTDAFKSLRKNLLEELDHAFPDEVDMYREI-XXXXXXXXXXAQSLQTLQNGDVKLKSEY 198
GKTD FKSLRK+LLEEL+ FPDEV+ YREI AQS +L NGDVK+K E+
Sbjct: 126 GKTDGFKSLRKHLLEELEQTFPDEVESYREIRAMSAAEAKRLAQSQSSLPNGDVKVKPEH 185
>ref|NP_001063737.1| Os09g0528300 [Oryza sativa Japonica Group]
gi|113631970|dbj|BAF25651.1| Os09g0528300 [Oryza sativa
Japonica Group] gi|125564452|gb|EAZ09832.1| hypothetical
protein OsI_32122 [Oryza sativa Indica Group]
gi|125606402|gb|EAZ45438.1| hypothetical protein
OsJ_30088 [Oryza sativa Japonica Group]
gi|215768100|dbj|BAH00329.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 190
Score = 63.5 bits (153), Expect = 3e-08
Identities = 35/60 (58%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Frame = -1
Query: 374 GKTDAFKSLRKNLLEELDHAFPDEVDMYREI-XXXXXXXXXXAQSLQTLQNGDVKLKSEY 198
GKTDAFKSLRK+LLEEL+ AFP++V+ YREI AQS L NGDVK+K E+
Sbjct: 131 GKTDAFKSLRKHLLEELEQAFPEDVEAYREIRATAAAESKQLAQSQSALPNGDVKVKPEH 190
>ref|XP_006849160.1| hypothetical protein AMTR_s00027p00143800 [Amborella trichopoda]
gi|548852647|gb|ERN10741.1| hypothetical protein
AMTR_s00027p00143800 [Amborella trichopoda]
Length = 175
Score = 63.2 bits (152), Expect = 4e-08
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Frame = -1
Query: 374 GKTDAFKSLRKNLLEELDHAFPDEVDMYREIXXXXXXXXXXAQSLQT-LQNGDVKLKSEY 198
GKT+ FKSLRK+LLEEL+ AFPDEVD YREI Q+ L NGD+K+K+E+
Sbjct: 116 GKTEVFKSLRKHLLEELEQAFPDEVDTYREIRATSAAELKRQTQAQSILPNGDMKVKTEH 175
>ref|XP_006305653.1| hypothetical protein CARUB_v10010356mg [Capsella rubella]
gi|482574364|gb|EOA38551.1| hypothetical protein
CARUB_v10010356mg [Capsella rubella]
Length = 193
Score = 63.2 bits (152), Expect = 4e-08
Identities = 34/59 (57%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Frame = -1
Query: 374 GKTDAFKSLRKNLLEELDHAFPDEVDMYREI-XXXXXXXXXXAQSLQTLQNGDVKLKSE 201
GKTDAFK LRK++LEEL+ FPDEVD+YREI AQS L NGD K+K+E
Sbjct: 134 GKTDAFKDLRKHILEELEQTFPDEVDIYREIRANSAAEAKRVAQSQSALPNGDAKVKNE 192