BLASTX nr result

ID: Zingiber23_contig00035098 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00035098
         (221 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276286.2| PREDICTED: katanin p60 ATPase-containing sub...    56   4e-06
ref|XP_006467465.1| PREDICTED: katanin p60 ATPase-containing sub...    55   1e-05
ref|XP_006467464.1| PREDICTED: katanin p60 ATPase-containing sub...    55   1e-05
ref|XP_006449694.1| hypothetical protein CICLE_v10015142mg [Citr...    55   1e-05
ref|XP_006449693.1| hypothetical protein CICLE_v10015142mg [Citr...    55   1e-05
ref|XP_004293524.1| PREDICTED: katanin p60 ATPase-containing sub...    55   1e-05

>ref|XP_002276286.2| PREDICTED: katanin p60 ATPase-containing subunit A-like 2 [Vitis
           vinifera]
          Length = 406

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/41 (63%), Positives = 31/41 (75%)
 Frame = +1

Query: 97  MGDEPLLTRWTFRDFKLVYDVKFGRKKPPKGDKVEEERSSG 219
           M DEP LTRW+F+DFK+ YDVKFGRKK P  +K +   SSG
Sbjct: 1   MADEPFLTRWSFQDFKMFYDVKFGRKKEP--EKHDAAESSG 39


>ref|XP_006467465.1| PREDICTED: katanin p60 ATPase-containing subunit A-like 2-like
           isoform X2 [Citrus sinensis]
          Length = 401

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 26/44 (59%), Positives = 30/44 (68%), Gaps = 3/44 (6%)
 Frame = +1

Query: 97  MGDEPLLTRWTFRDFKLVYDVKFGRKK---PPKGDKVEEERSSG 219
           M DEP+ TRWTF+DFK+ YD KFGRKK   P KG+  E   S G
Sbjct: 1   MADEPMPTRWTFQDFKMFYDAKFGRKKIKEPEKGEITERPVSDG 44


>ref|XP_006467464.1| PREDICTED: katanin p60 ATPase-containing subunit A-like 2-like
           isoform X1 [Citrus sinensis]
          Length = 403

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 26/44 (59%), Positives = 30/44 (68%), Gaps = 3/44 (6%)
 Frame = +1

Query: 97  MGDEPLLTRWTFRDFKLVYDVKFGRKK---PPKGDKVEEERSSG 219
           M DEP+ TRWTF+DFK+ YD KFGRKK   P KG+  E   S G
Sbjct: 1   MADEPMPTRWTFQDFKMFYDAKFGRKKIKEPEKGEITERPVSDG 44


>ref|XP_006449694.1| hypothetical protein CICLE_v10015142mg [Citrus clementina]
           gi|557552305|gb|ESR62934.1| hypothetical protein
           CICLE_v10015142mg [Citrus clementina]
          Length = 467

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 26/44 (59%), Positives = 30/44 (68%), Gaps = 3/44 (6%)
 Frame = +1

Query: 97  MGDEPLLTRWTFRDFKLVYDVKFGRKK---PPKGDKVEEERSSG 219
           M DEP+ TRWTF+DFK+ YD KFGRKK   P KG+  E   S G
Sbjct: 65  MADEPMPTRWTFQDFKMFYDAKFGRKKIKEPEKGEITERPVSDG 108


>ref|XP_006449693.1| hypothetical protein CICLE_v10015142mg [Citrus clementina]
           gi|557552304|gb|ESR62933.1| hypothetical protein
           CICLE_v10015142mg [Citrus clementina]
          Length = 350

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 26/44 (59%), Positives = 30/44 (68%), Gaps = 3/44 (6%)
 Frame = +1

Query: 97  MGDEPLLTRWTFRDFKLVYDVKFGRKK---PPKGDKVEEERSSG 219
           M DEP+ TRWTF+DFK+ YD KFGRKK   P KG+  E   S G
Sbjct: 65  MADEPMPTRWTFQDFKMFYDAKFGRKKIKEPEKGEITERPVSDG 108


>ref|XP_004293524.1| PREDICTED: katanin p60 ATPase-containing subunit A-like 2-like
           [Fragaria vesca subsp. vesca]
          Length = 404

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/41 (58%), Positives = 29/41 (70%)
 Frame = +1

Query: 97  MGDEPLLTRWTFRDFKLVYDVKFGRKKPPKGDKVEEERSSG 219
           M DEP +TRWTF DFKL YD KFGRKK P+    E+  ++G
Sbjct: 1   MSDEPSITRWTFPDFKLFYDAKFGRKKVPEETPSEQATANG 41


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