BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00034880
         (536 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY28616.1| Tetratricopeptide repeat-like superfamily protein...    77   2e-12
ref|XP_006449088.1| hypothetical protein CICLE_v10018367mg [Citr...    73   4e-11
ref|XP_006348079.1| PREDICTED: pentatricopeptide repeat-containi...    72   1e-10
ref|XP_004233795.1| PREDICTED: pentatricopeptide repeat-containi...    70   2e-10
ref|XP_006467990.1| PREDICTED: pentatricopeptide repeat-containi...    70   4e-10
ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containi...    67   3e-09
ref|XP_002305605.1| pentatricopeptide repeat-containing family p...    65   1e-08
ref|XP_002518527.1| pentatricopeptide repeat-containing protein,...    64   3e-08
gb|EMJ13917.1| hypothetical protein PRUPE_ppa018797mg [Prunus pe...    63   5e-08
ref|XP_006826483.1| hypothetical protein AMTR_s00004p00243870 [A...    62   1e-07
ref|XP_006413812.1| hypothetical protein EUTSA_v10024760mg [Eutr...    60   3e-07
ref|XP_006857674.1| hypothetical protein AMTR_s00061p00160470 [A...    58   1e-06
ref|XP_006285106.1| hypothetical protein CARUB_v10006439mg [Caps...    56   5e-06

>gb|EOY28616.1| Tetratricopeptide repeat-like superfamily protein, putative
           [Theobroma cacao]
          Length = 578

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 33/68 (48%), Positives = 50/68 (73%)
 Frame = +2

Query: 2   GERRSAKAIQVFDYMQGKDILDGDIFVTMICELCHSGENRRAMNLHDEMLKLGYKPNEAS 181
           GER++ +A++V+DYM G +++D   F  MI ELCH  E ++AM +HDEML +G KP++ +
Sbjct: 510 GERKAEEAVRVYDYMTGLNLVDSASFTIMIRELCHMKEMKKAMKIHDEMLNMGLKPDKGT 569

Query: 182 YRNLISHF 205
           Y+ LIS F
Sbjct: 570 YKRLISGF 577


>ref|XP_006449088.1| hypothetical protein CICLE_v10018367mg [Citrus clementina]
           gi|557551699|gb|ESR62328.1| hypothetical protein
           CICLE_v10018367mg [Citrus clementina]
          Length = 578

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 31/65 (47%), Positives = 47/65 (72%)
 Frame = +2

Query: 11  RSAKAIQVFDYMQGKDILDGDIFVTMICELCHSGENRRAMNLHDEMLKLGYKPNEASYRN 190
           R  +A+Q+FDYM+   ++    FV ++  LCH  E R+AM +HDEMLK+G+KP+EA+Y+ 
Sbjct: 513 RMEEAVQIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKIHDEMLKMGHKPDEATYKQ 572

Query: 191 LISHF 205
           +IS F
Sbjct: 573 VISGF 577


>ref|XP_006348079.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21170-like isoform X1 [Solanum tuberosum]
           gi|565362693|ref|XP_006348080.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g21170-like isoform X2 [Solanum tuberosum]
           gi|565362695|ref|XP_006348081.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g21170-like isoform X3 [Solanum tuberosum]
          Length = 584

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 33/66 (50%), Positives = 47/66 (71%)
 Frame = +2

Query: 8   RRSAKAIQVFDYMQGKDILDGDIFVTMICELCHSGENRRAMNLHDEMLKLGYKPNEASYR 187
           RR  +A+++FDYM+  D+L  + F  MI  LC   E R+AM LHD+MLKLG+KP++ +Y+
Sbjct: 518 RRREEALKIFDYMRTHDMLSSESFSIMIRGLCQEQEFRKAMRLHDDMLKLGFKPDKKAYK 577

Query: 188 NLISHF 205
            LIS F
Sbjct: 578 RLISGF 583


>ref|XP_004233795.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21170-like [Solanum lycopersicum]
          Length = 584

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 33/66 (50%), Positives = 46/66 (69%)
 Frame = +2

Query: 8   RRSAKAIQVFDYMQGKDILDGDIFVTMICELCHSGENRRAMNLHDEMLKLGYKPNEASYR 187
           RR  +A+++FDYM+  D+L    F  MI  LC   E R+AM LHD+MLKLG+KP++ +Y+
Sbjct: 518 RRHEEALKIFDYMRTHDMLSSGSFSIMIRGLCQEEEFRKAMRLHDDMLKLGFKPDKKAYK 577

Query: 188 NLISHF 205
            LIS F
Sbjct: 578 RLISGF 583


>ref|XP_006467990.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21170-like [Citrus sinensis]
          Length = 538

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 30/65 (46%), Positives = 46/65 (70%)
 Frame = +2

Query: 11  RSAKAIQVFDYMQGKDILDGDIFVTMICELCHSGENRRAMNLHDEMLKLGYKPNEASYRN 190
           R  +A+++FDYM+   ++    FV ++  LCH  E R+AM  HDEMLK+G+KP+EA+Y+ 
Sbjct: 473 RMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMKNHDEMLKMGHKPDEATYKQ 532

Query: 191 LISHF 205
           +IS F
Sbjct: 533 VISGF 537


>ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21170-like [Vitis vinifera]
          Length = 569

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 31/67 (46%), Positives = 43/67 (64%)
 Frame = +2

Query: 5   ERRSAKAIQVFDYMQGKDILDGDIFVTMICELCHSGENRRAMNLHDEMLKLGYKPNEASY 184
           E+R   A+ VFD M+ +++L    F  M+  LC   E R+AM  HDEMLK+G KP+ A+Y
Sbjct: 502 EKRIEDAVSVFDCMRSQNLLSSTSFTIMVSGLCRERELRKAMKFHDEMLKMGLKPDRATY 561

Query: 185 RNLISHF 205
           + LIS F
Sbjct: 562 KRLISGF 568


>ref|XP_002305605.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222848569|gb|EEE86116.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 564

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 29/66 (43%), Positives = 45/66 (68%)
 Frame = +2

Query: 11  RSAKAIQVFDYMQGKDILDGDIFVTMICELCHSGENRRAMNLHDEMLKLGYKPNEASYRN 190
           R  + ++VFDYM+G  +++ + F   I  LC + E R+AM LHDEML +G KP++A+Y+ 
Sbjct: 498 RIEEVVRVFDYMKGLKLVNSESFTITIRGLCRAKEMRKAMKLHDEMLDMGLKPDKAAYKR 557

Query: 191 LISHFS 208
           LI  F+
Sbjct: 558 LILEFN 563


>ref|XP_002518527.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542372|gb|EEF43914.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 599

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 30/68 (44%), Positives = 45/68 (66%)
 Frame = +2

Query: 5   ERRSAKAIQVFDYMQGKDILDGDIFVTMICELCHSGENRRAMNLHDEMLKLGYKPNEASY 184
           E R  ++I+VFDYM+G  + +   F  +I  LC + E R+AM LHDEML +G KP++ +Y
Sbjct: 525 EGRVEESIKVFDYMKGLKLANSASFTVIIRGLCRAKELRKAMKLHDEMLNMGLKPDKPTY 584

Query: 185 RNLISHFS 208
           + LI  F+
Sbjct: 585 KRLILEFN 592


>gb|EMJ13917.1| hypothetical protein PRUPE_ppa018797mg [Prunus persica]
          Length = 584

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 31/66 (46%), Positives = 44/66 (66%)
 Frame = +2

Query: 8   RRSAKAIQVFDYMQGKDILDGDIFVTMICELCHSGENRRAMNLHDEMLKLGYKPNEASYR 187
           RR  +A++VFDYM+  +++    F  MI  LC   E R+AM +HDEMLK+  KP+ A+Y+
Sbjct: 502 RRIEEAMRVFDYMRRHNLMSSASFTIMIRGLCGVKELRKAMKIHDEMLKMRLKPDAATYK 561

Query: 188 NLISHF 205
            LIS F
Sbjct: 562 RLISGF 567


>ref|XP_006826483.1| hypothetical protein AMTR_s00004p00243870 [Amborella trichopoda]
           gi|548830797|gb|ERM93720.1| hypothetical protein
           AMTR_s00004p00243870 [Amborella trichopoda]
          Length = 359

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 30/67 (44%), Positives = 41/67 (61%)
 Frame = +2

Query: 5   ERRSAKAIQVFDYMQGKDILDGDIFVTMICELCHSGENRRAMNLHDEMLKLGYKPNEASY 184
           E +  +A  +FDYM+ KD+     F+TMI   C   +   A  +HDEMLK G KP+EA+Y
Sbjct: 292 EGKLEEASGMFDYMRNKDVTSSASFMTMISWFCREKKFSEARKMHDEMLKKGLKPDEATY 351

Query: 185 RNLISHF 205
           + LIS F
Sbjct: 352 KRLISGF 358


>ref|XP_006413812.1| hypothetical protein EUTSA_v10024760mg [Eutrema salsugineum]
           gi|557114982|gb|ESQ55265.1| hypothetical protein
           EUTSA_v10024760mg [Eutrema salsugineum]
          Length = 584

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 29/62 (46%), Positives = 41/62 (66%)
 Frame = +2

Query: 20  KAIQVFDYMQGKDILDGDIFVTMICELCHSGENRRAMNLHDEMLKLGYKPNEASYRNLIS 199
           +A+QVF+YM+  + ++   F  MI  LC   E ++AM  HDEMLKLG KP+  +Y+ LIS
Sbjct: 522 EAVQVFEYMKEMNTVNSKSFTIMIHGLCRVKEMKKAMKSHDEMLKLGLKPDLVTYKRLIS 581

Query: 200 HF 205
            F
Sbjct: 582 GF 583


>ref|XP_006857674.1| hypothetical protein AMTR_s00061p00160470 [Amborella trichopoda]
           gi|548861770|gb|ERN19141.1| hypothetical protein
           AMTR_s00061p00160470 [Amborella trichopoda]
          Length = 372

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/62 (43%), Positives = 40/62 (64%)
 Frame = +2

Query: 20  KAIQVFDYMQGKDILDGDIFVTMICELCHSGENRRAMNLHDEMLKLGYKPNEASYRNLIS 199
           +A ++FD+M+ K++     F+TMI   C   +   A  +HDEMLK G KP+EA+Y+ LIS
Sbjct: 310 EASEMFDHMRNKNVTSSASFITMISWFCWEKKFSEARKMHDEMLKKGLKPDEATYKRLIS 369

Query: 200 HF 205
            F
Sbjct: 370 VF 371


>ref|XP_006285106.1| hypothetical protein CARUB_v10006439mg [Capsella rubella]
           gi|482553811|gb|EOA18004.1| hypothetical protein
           CARUB_v10006439mg [Capsella rubella]
          Length = 585

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 27/62 (43%), Positives = 40/62 (64%)
 Frame = +2

Query: 20  KAIQVFDYMQGKDILDGDIFVTMICELCHSGENRRAMNLHDEMLKLGYKPNEASYRNLIS 199
           +A++VF+YM+    ++   F  MI  LCH  E ++A   HDEMLKLG KP+ A+Y+ +I 
Sbjct: 523 EAVRVFEYMKEMKSVNSKSFTIMIQGLCHVKEMKKAKQSHDEMLKLGMKPDLATYKRVIY 582

Query: 200 HF 205
            F
Sbjct: 583 GF 584