BLASTX nr result

ID: Zingiber23_contig00034780 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00034780
         (210 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006829183.1| hypothetical protein AMTR_s00001p00270970 [A...    59   9e-07
ref|XP_006829178.1| hypothetical protein AMTR_s00001p00270860 [A...    56   6e-06

>ref|XP_006829183.1| hypothetical protein AMTR_s00001p00270970 [Amborella trichopoda]
           gi|548834162|gb|ERM96599.1| hypothetical protein
           AMTR_s00001p00270970 [Amborella trichopoda]
          Length = 366

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 28/58 (48%), Positives = 38/58 (65%)
 Frame = +3

Query: 18  LRKSLFYVSVGSNDLFAFSTVLIPGNSTQKDEIVAAVLGQFAGQLRSIYQLGARKFAV 191
           L KSLF VSVGSNDLF      IP  S ++DE +A +   + G L+++Y +GARKF +
Sbjct: 164 LAKSLFVVSVGSNDLFDNFNPFIPKTSAEQDEFIANLTATYKGHLKALYGMGARKFGI 221


>ref|XP_006829178.1| hypothetical protein AMTR_s00001p00270860 [Amborella trichopoda]
           gi|548834157|gb|ERM96594.1| hypothetical protein
           AMTR_s00001p00270860 [Amborella trichopoda]
          Length = 356

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 27/68 (39%), Positives = 39/68 (57%)
 Frame = +3

Query: 6   AAFFLRKSLFYVSVGSNDLFAFSTVLIPGNSTQKDEIVAAVLGQFAGQLRSIYQLGARKF 185
           A   L  SLF++S GSND+        P  S QKDE+VA +   +   L+ +Y +GARKF
Sbjct: 158 AQAMLANSLFFISTGSNDIMQNFNPSNPPTSDQKDELVATLASTYKAHLQELYNIGARKF 217

Query: 186 AVPGTGQL 209
           A+ G  ++
Sbjct: 218 AILGLSKI 225


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