BLASTX nr result

ID: Zingiber23_contig00034723 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00034723
         (466 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006854835.1| hypothetical protein AMTR_s00063p00208440 [A...    74   2e-11
ref|XP_006842414.1| hypothetical protein AMTR_s05659p00000220 [A...    61   2e-07

>ref|XP_006854835.1| hypothetical protein AMTR_s00063p00208440 [Amborella trichopoda]
           gi|548858539|gb|ERN16302.1| hypothetical protein
           AMTR_s00063p00208440 [Amborella trichopoda]
          Length = 107

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 36/55 (65%), Positives = 40/55 (72%)
 Frame = -1

Query: 232 DTVALPWGRASPDFYRSLVRPPNEN*GPCAGLSSLRLACSVWSVPWFLECQPQRG 68
           DT+ALPWGR SPDF+RSLVRPPNEN GPC GL SLRLA  ++ VP        RG
Sbjct: 18  DTIALPWGRGSPDFHRSLVRPPNENLGPCTGLLSLRLA--LYGVPHGFSSASHRG 70



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 29/40 (72%), Positives = 29/40 (72%)
 Frame = -2

Query: 120 LALYGVXXXXXXXXXREECHQLGRYLPLTTRSPAARAPRF 1
           LALYGV         R ECHQLGRY PLTTRSPAARAPRF
Sbjct: 54  LALYGVPHGFSSASHRGECHQLGRYWPLTTRSPAARAPRF 93


>ref|XP_006842414.1| hypothetical protein AMTR_s05659p00000220 [Amborella trichopoda]
           gi|548844497|gb|ERN04089.1| hypothetical protein
           AMTR_s05659p00000220 [Amborella trichopoda]
          Length = 102

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 36/57 (63%), Positives = 39/57 (68%)
 Frame = +2

Query: 188 IEVGASPSPWQRYSVLREEFRGLIVARTSFSF*VMRRGPVLDRTVIQQ*KDKRRSQR 358
           +EVGA+PSPWQR SVLREEFRGLIVARTSF F    +G           KD RRSQR
Sbjct: 1   MEVGATPSPWQRNSVLREEFRGLIVARTSF-FLGHAKGASPRSYCSSTKKDNRRSQR 56



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 29/45 (64%), Positives = 29/45 (64%)
 Frame = +1

Query: 277 FILGHAKGASP*SYSYSTMKRQETLSTARRHSLDELFQLLHSFVP 411
           F LGHAKGASP SY  ST K        RRHSL E FQLLH FVP
Sbjct: 30  FFLGHAKGASPRSYCSSTKKDNRRSQRRRRHSLSEFFQLLHDFVP 74


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