BLASTX nr result
ID: Zingiber23_contig00034696
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00034696
(358 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAJ91286.1| predicted protein [Hordeum vulgare subsp. vulgare] 105 6e-21
emb|CAN79347.1| hypothetical protein VITISV_019894 [Vitis vinifera] 104 1e-20
gb|EMS49524.1| hypothetical protein TRIUR3_20676 [Triticum urartu] 102 5e-20
ref|XP_003576355.1| PREDICTED: pentatricopeptide repeat-containi... 102 5e-20
gb|EMT24148.1| hypothetical protein F775_13027 [Aegilops tauschii] 101 9e-20
ref|XP_006361496.1| PREDICTED: pentatricopeptide repeat-containi... 89 5e-16
ref|XP_004250478.1| PREDICTED: pentatricopeptide repeat-containi... 88 1e-15
ref|XP_006592747.1| PREDICTED: pentatricopeptide repeat-containi... 85 9e-15
ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containi... 85 9e-15
gb|EPS60295.1| hypothetical protein M569_14504, partial [Genlise... 84 2e-14
ref|XP_002523781.1| pentatricopeptide repeat-containing protein,... 84 2e-14
gb|EOY33477.1| Tetratricopeptide repeat (TPR)-like superfamily p... 84 3e-14
ref|XP_004231236.1| PREDICTED: pentatricopeptide repeat-containi... 84 3e-14
ref|NP_179644.1| mitochondrial editing factor 21 [Arabidopsis th... 83 4e-14
ref|XP_006859052.1| hypothetical protein AMTR_s00068p00189110 [A... 82 6e-14
ref|XP_006408981.1| hypothetical protein EUTSA_v10001958mg [Eutr... 82 7e-14
ref|XP_006299486.1| hypothetical protein CARUB_v10015651mg [Caps... 82 7e-14
ref|XP_004161848.1| PREDICTED: pentatricopeptide repeat-containi... 82 1e-13
ref|XP_004137635.1| PREDICTED: pentatricopeptide repeat-containi... 82 1e-13
ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containi... 82 1e-13
>dbj|BAJ91286.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 625
Score = 105 bits (262), Expect = 6e-21
Identities = 55/119 (46%), Positives = 74/119 (62%), Gaps = 1/119 (0%)
Frame = -1
Query: 358 IRVDEFTLATVLNELADHLWVSEGKQLHSLMTKGGFFTDCFCCNALLNLYSKED-IHSAL 182
++ DEFT ATVLN LA+ E Q+HS++ K G+ D F CN+LL+LY + I A
Sbjct: 221 VQPDEFTFATVLNGLAELSAGLEAMQVHSIILKSGYLKDLFLCNSLLDLYGRCGYIDLAK 280
Query: 181 KMFDEMYDRSAVSWTIIVSGLLASGNTYTAFEALNSMQMAEVEPNSHTFGSLISCCGDV 5
K+FD M ++ VSWT ++SGL A G AF+ M A + PNS TFGS++S C DV
Sbjct: 281 KLFDAMLEKDVVSWTAVISGLAACGYQADAFDIFRQMLKAAMLPNSFTFGSIVSSCADV 339
Score = 61.2 bits (147), Expect = 1e-07
Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 4/120 (3%)
Frame = -1
Query: 349 DEFTLATVLNELADHLWVSEGKQLHSLMTKGGFFTDCFCCNALLNLYSK-EDIHSALKMF 173
+ FT ++++ AD + G+Q H+L+ K G + +++YSK + A++MF
Sbjct: 325 NSFTFGSIVSSCADVNDLGSGRQCHALVVKHGLELVPIIASCFVDMYSKCAKMDDAIRMF 384
Query: 172 DEMYDRSAVSWTIIVSGLLASGNTYTAFEALNSMQMAEVE---PNSHTFGSLISCCGDVG 2
+ M R +SW ++ GL +G + + E + M E PNS TF ++S C G
Sbjct: 385 EIMPQRDIISWNAMICGLAQNGQSARSLELYDEMTQLHYESVTPNSVTFVGVLSACSHAG 444
>emb|CAN79347.1| hypothetical protein VITISV_019894 [Vitis vinifera]
Length = 667
Score = 104 bits (259), Expect = 1e-20
Identities = 55/118 (46%), Positives = 74/118 (62%), Gaps = 1/118 (0%)
Frame = -1
Query: 358 IRVDEFTLATVLNELADHLWVSEGKQLHSLMTKGGFFTDCFCCNALLNLYSKED-IHSAL 182
I DE+T A VLNE A V E Q+HSL+ + GF +D F NAL+NLYSK + SA
Sbjct: 240 ISADEYTYAIVLNEFAARWQVFEAMQVHSLIIERGFCSDRFTNNALVNLYSKCGYVASAS 299
Query: 181 KMFDEMYDRSAVSWTIIVSGLLASGNTYTAFEALNSMQMAEVEPNSHTFGSLISCCGD 8
++F+E+ D+ VSWT+I+ G L SG+ A MQ+ ++EPNS TFG L+ C D
Sbjct: 300 RLFEEIPDQDVVSWTVIIVGFLQSGHMEEAMWLFYQMQLGDIEPNSFTFGGLLGACAD 357
>gb|EMS49524.1| hypothetical protein TRIUR3_20676 [Triticum urartu]
Length = 625
Score = 102 bits (254), Expect = 5e-20
Identities = 53/119 (44%), Positives = 73/119 (61%), Gaps = 1/119 (0%)
Frame = -1
Query: 358 IRVDEFTLATVLNELADHLWVSEGKQLHSLMTKGGFFTDCFCCNALLNLYSKED-IHSAL 182
+R DEFT ATVLN LA+ E Q+HS++ K G+ D F CN+LL++Y + + A
Sbjct: 221 VRPDEFTFATVLNGLAERSAGLEAMQVHSVILKSGYLRDLFLCNSLLDVYGRCGYVDLAK 280
Query: 181 KMFDEMYDRSAVSWTIIVSGLLASGNTYTAFEALNSMQMAEVEPNSHTFGSLISCCGDV 5
K+FD M ++ VSWT ++SGL A G AF+ M A + PNS TFGS++S C V
Sbjct: 281 KLFDAMLEKDVVSWTTVISGLAACGYQADAFDIFCQMLKAAMPPNSFTFGSIVSSCAYV 339
Score = 56.6 bits (135), Expect = 3e-06
Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
Frame = -1
Query: 349 DEFTLATVLNELADHLWVSEGKQLHSLMTKGGFFTDCFCCNALLNLYSK-EDIHSALKMF 173
+ FT ++++ A + G+Q H+L K G + +++YSK + A++MF
Sbjct: 325 NSFTFGSIVSSCAYVNDLGSGRQCHALAVKHGLELVPIAASCFVDMYSKCAKMDDAIRMF 384
Query: 172 DEMYDRSAVSWTIIVSGLLASGNTYTAFEALNSMQM---AEVEPNSHTFGSLISCCGDVG 2
+ M R V+W ++ GL +G + + E + M V PNS TF ++S C G
Sbjct: 385 EIMPQRDIVAWNAMICGLAQNGQSVRSLELYDEMMRLHHESVTPNSVTFVGVLSACSHAG 444
>ref|XP_003576355.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Brachypodium distachyon]
Length = 617
Score = 102 bits (254), Expect = 5e-20
Identities = 53/119 (44%), Positives = 75/119 (63%), Gaps = 1/119 (0%)
Frame = -1
Query: 358 IRVDEFTLATVLNELADHLWVSEGKQLHSLMTKGGFFTDCFCCNALLNLYSKED-IHSAL 182
++ DEFT ATV+N LA+ E Q+HS++ K G D F CN+LLN+Y + + A
Sbjct: 226 VQPDEFTFATVVNGLAERFAGLEAMQVHSVILKSGHLKDLFLCNSLLNVYGRCGYVDLAK 285
Query: 181 KMFDEMYDRSAVSWTIIVSGLLASGNTYTAFEALNSMQMAEVEPNSHTFGSLISCCGDV 5
K+F+ M ++ VSWT ++SGL+ASG+ AF+ MQ A PNS TFGS++S C V
Sbjct: 286 KLFEAMPEKDVVSWTALISGLVASGHQADAFKTFCRMQGAATVPNSFTFGSVVSSCACV 344
Score = 61.2 bits (147), Expect = 1e-07
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 4/120 (3%)
Frame = -1
Query: 349 DEFTLATVLNELADHLWVSEGKQLHSLMTKGGFFTDCFCCNALLNLYSK-EDIHSALKMF 173
+ FT +V++ A + G+Q H+L+ K G + ++LL++YSK ++ A +MF
Sbjct: 330 NSFTFGSVVSSCACVNDLGGGRQCHALVIKHGLESIPTVASSLLDMYSKCAEMDDATRMF 389
Query: 172 DEMYDRSAVSWTIIVSGLLASGNTYTAFEALNSM---QMAEVEPNSHTFGSLISCCGDVG 2
D M R VSW ++ GL +G + A E + M + PNS T ++S C VG
Sbjct: 390 DAMPRRDIVSWNAMICGLAQNGRSARALELYDEMLRLHQESITPNSVTCVGVLSACSHVG 449
>gb|EMT24148.1| hypothetical protein F775_13027 [Aegilops tauschii]
Length = 646
Score = 101 bits (252), Expect = 9e-20
Identities = 53/119 (44%), Positives = 73/119 (61%), Gaps = 1/119 (0%)
Frame = -1
Query: 358 IRVDEFTLATVLNELADHLWVSEGKQLHSLMTKGGFFTDCFCCNALLNLYSKED-IHSAL 182
+R DEFT ATVLN LA+ E Q+HS++ K G+ D F CN+LL++Y + + A
Sbjct: 221 VRPDEFTFATVLNGLAERSAGLEAMQVHSVILKSGYLKDLFLCNSLLDVYGRCGYVDLAK 280
Query: 181 KMFDEMYDRSAVSWTIIVSGLLASGNTYTAFEALNSMQMAEVEPNSHTFGSLISCCGDV 5
K+FD M ++ VSWT ++SGL A G AF+ M A + PNS TFGS++S C V
Sbjct: 281 KLFDAMLEKDVVSWTAVISGLAACGYQADAFDIFCQMLKAAMLPNSFTFGSIVSSCAYV 339
Score = 57.4 bits (137), Expect = 2e-06
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
Frame = -1
Query: 349 DEFTLATVLNELADHLWVSEGKQLHSLMTKGGFFTDCFCCNALLNLYSK-EDIHSALKMF 173
+ FT ++++ A + G+Q H+L K G + +++YSK + A++MF
Sbjct: 325 NSFTFGSIVSSCAYVNDLGSGRQCHALAVKHGLELVPIVASCFVDMYSKCAKMDDAIRMF 384
Query: 172 DEMYDRSAVSWTIIVSGLLASGNTYTAFEALNSMQMAEVE---PNSHTFGSLISCCGDVG 2
+ M R VSW ++ GL +G + + E + M E PNS TF ++S C G
Sbjct: 385 EIMPQRDIVSWNAMICGLAQNGQSARSLELYDEMMRLHCELVTPNSVTFVGVLSACSHAG 444
>ref|XP_006361496.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Solanum tuberosum]
Length = 702
Score = 89.4 bits (220), Expect = 5e-16
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Frame = -1
Query: 358 IRVDEFTLATVLNELADHLWVSEGKQLHSLMTKGGFFTDCFCCNALLNLYSKEDI-HSAL 182
++ E T ++V+ AD + GKQ+HS + K GF + F CNALL+ YSK ++ +L
Sbjct: 301 LKPSERTFSSVIGAFADIKELRVGKQIHSRIVKQGFDSFSFVCNALLDFYSKSELFEKSL 360
Query: 181 KMFDEMYDRSAVSWTIIVSGLLASGNTYTAFEALNSMQMAEVEPNSHTFGSLISCCGDV 5
K+F EM + VSW +++G ++SG A L M + EP+ +T+ S++S CGD+
Sbjct: 361 KLFQEMKEHDVVSWNTLIAGCVSSGRYEEALRFLREMLLEGFEPSLYTYSSILSICGDL 419
Score = 61.6 bits (148), Expect = 1e-07
Identities = 36/115 (31%), Positives = 62/115 (53%), Gaps = 1/115 (0%)
Frame = -1
Query: 343 FTLATVLNELADHLWVSEGKQLHSLMTKGGFFTDCFCCNALLNLYSK-EDIHSALKMFDE 167
+T +++L+ D + GKQ H + K F ++ +AL+++Y+K + A ++FD
Sbjct: 407 YTYSSILSICGDLPAIEWGKQTHCRVLKSRFDSNVVVDSALIDMYAKCGRLGYARRVFDI 466
Query: 166 MYDRSAVSWTIIVSGLLASGNTYTAFEALNSMQMAEVEPNSHTFGSLISCCGDVG 2
+ ++ +SW +V G G A E MQ +EV+PN TF ++S CG VG
Sbjct: 467 LPAKNLISWNTMVVGYAQHGFGKEALEIYGMMQSSEVKPNDITFLGVLSACGHVG 521
>ref|XP_004250478.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Solanum lycopersicum]
Length = 702
Score = 87.8 bits (216), Expect = 1e-15
Identities = 44/119 (36%), Positives = 70/119 (58%), Gaps = 1/119 (0%)
Frame = -1
Query: 358 IRVDEFTLATVLNELADHLWVSEGKQLHSLMTKGGFFTDCFCCNALLNLYSKEDI-HSAL 182
++ E T ++V+ AD V GKQ+H + K GF + F CNALL+ YSK D+ +L
Sbjct: 301 LKPSERTFSSVIGAFADVKEVRVGKQIHCRIVKMGFDSFSFVCNALLDFYSKSDLFEESL 360
Query: 181 KMFDEMYDRSAVSWTIIVSGLLASGNTYTAFEALNSMQMAEVEPNSHTFGSLISCCGDV 5
K+F EM ++ VSW +++G ++S A L M + EP+ +T+ S++S CGD+
Sbjct: 361 KLFQEMKEQDVVSWNTLIAGCVSSSRYEEALRFLREMLLEGFEPSLYTYSSILSICGDL 419
Score = 57.0 bits (136), Expect = 3e-06
Identities = 35/115 (30%), Positives = 60/115 (52%), Gaps = 1/115 (0%)
Frame = -1
Query: 343 FTLATVLNELADHLWVSEGKQLHSLMTKGGFFTDCFCCNALLNLYSK-EDIHSALKMFDE 167
+T +++L+ D + GKQ H + K ++ +AL+++Y+K + A ++FD
Sbjct: 407 YTYSSILSICGDLPAIEWGKQTHCRVLKSRLDSNVVVDSALIDMYAKCGRLGYARRVFDI 466
Query: 166 MYDRSAVSWTIIVSGLLASGNTYTAFEALNSMQMAEVEPNSHTFGSLISCCGDVG 2
+ ++ VSW +V G G A E MQ + V+PN TF ++S CG VG
Sbjct: 467 LPAKNLVSWNTMVVGYAQHGFGKEALEIYGMMQSSGVKPNDITFLGVLSACGHVG 521
>ref|XP_006592747.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like isoform X2 [Glycine max]
Length = 863
Score = 85.1 bits (209), Expect = 9e-15
Identities = 43/118 (36%), Positives = 72/118 (61%), Gaps = 1/118 (0%)
Frame = -1
Query: 355 RVDEFTLATVLNELADHLWVSEGKQLHSLMTKGGFFTDCFCCNALLNLYSKED-IHSALK 179
R D +T++TV+ LA+ V+ G Q+H+L+ K GF T+ CN+L+++ SK + A
Sbjct: 200 RPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARV 259
Query: 178 MFDEMYDRSAVSWTIIVSGLLASGNTYTAFEALNSMQMAEVEPNSHTFGSLISCCGDV 5
+FD M ++ +VSW +++G + +G AFE N+MQ+A +P TF S+I C +
Sbjct: 260 VFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASL 317
Score = 60.8 bits (146), Expect = 2e-07
Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 2/121 (1%)
Frame = -1
Query: 358 IRVDEFTLATVLNEL-ADHLWVSEGKQLHSLMTKGGFFTDCFCCNALLNLYSKE-DIHSA 185
I+ +EFT +++N A V +GKQ H+ K ++L+ LY+K +I SA
Sbjct: 499 IKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESA 558
Query: 184 LKMFDEMYDRSAVSWTIIVSGLLASGNTYTAFEALNSMQMAEVEPNSHTFGSLISCCGDV 5
++F +R VSW ++SG G A E MQ +E ++ TF +IS C
Sbjct: 559 HEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHA 618
Query: 4 G 2
G
Sbjct: 619 G 619
>ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like isoform X1 [Glycine max]
Length = 876
Score = 85.1 bits (209), Expect = 9e-15
Identities = 43/118 (36%), Positives = 72/118 (61%), Gaps = 1/118 (0%)
Frame = -1
Query: 355 RVDEFTLATVLNELADHLWVSEGKQLHSLMTKGGFFTDCFCCNALLNLYSKED-IHSALK 179
R D +T++TV+ LA+ V+ G Q+H+L+ K GF T+ CN+L+++ SK + A
Sbjct: 200 RPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARV 259
Query: 178 MFDEMYDRSAVSWTIIVSGLLASGNTYTAFEALNSMQMAEVEPNSHTFGSLISCCGDV 5
+FD M ++ +VSW +++G + +G AFE N+MQ+A +P TF S+I C +
Sbjct: 260 VFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASL 317
Score = 60.8 bits (146), Expect = 2e-07
Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 2/121 (1%)
Frame = -1
Query: 358 IRVDEFTLATVLNEL-ADHLWVSEGKQLHSLMTKGGFFTDCFCCNALLNLYSKE-DIHSA 185
I+ +EFT +++N A V +GKQ H+ K ++L+ LY+K +I SA
Sbjct: 499 IKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESA 558
Query: 184 LKMFDEMYDRSAVSWTIIVSGLLASGNTYTAFEALNSMQMAEVEPNSHTFGSLISCCGDV 5
++F +R VSW ++SG G A E MQ +E ++ TF +IS C
Sbjct: 559 HEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHA 618
Query: 4 G 2
G
Sbjct: 619 G 619
>gb|EPS60295.1| hypothetical protein M569_14504, partial [Genlisea aurea]
Length = 819
Score = 84.0 bits (206), Expect = 2e-14
Identities = 44/118 (37%), Positives = 68/118 (57%), Gaps = 1/118 (0%)
Frame = -1
Query: 352 VDEFTLATVLNELADHLWVSEGKQLHSLMTKGGFFTDCFCCNALLNLYSK-EDIHSALKM 176
+D FT A++L+ A V +G+QLH + K GF +D NAL+++Y++ D+ S K+
Sbjct: 439 IDAFTFASLLSGAASIGAVGKGEQLHGRLLKSGFESDLCVSNALISMYTRCGDLRSGFKI 498
Query: 175 FDEMYDRSAVSWTIIVSGLLASGNTYTAFEALNSMQMAEVEPNSHTFGSLISCCGDVG 2
FD + +R+ VSWT I++G G TA E + M + PN TF S++S C G
Sbjct: 499 FDGIENRNIVSWTSIITGCAKHGFAETALELFHRMTETGIRPNDVTFVSILSACSHAG 556
Score = 63.2 bits (152), Expect = 4e-08
Identities = 36/121 (29%), Positives = 65/121 (53%), Gaps = 6/121 (4%)
Frame = -1
Query: 349 DEFTLATVLNELADHLWVSEGKQLHSLMTKGGFFTDCFCCNALLNLYSKEDIHSAL---- 182
D++T ++ L+ A+ + G+QLHS K G +D +L+++Y K ++ ++
Sbjct: 233 DQYTFSSCLSACAELGSAAVGRQLHSWAIKNGSISDVCVGCSLVDMYVKSCLNGSVAESR 292
Query: 181 KMFDEMYDRSAVSWTIIVSGLLASGNTYTAFEALNSMQMAE--VEPNSHTFGSLISCCGD 8
K+FD M + + +SWT I++G +G L M E V+PN TF +++ CGD
Sbjct: 293 KVFDAMLEHNVMSWTAIITGCAQNGGLPDEALRLYCRMMTEGTVKPNHFTFSAVLKACGD 352
Query: 7 V 5
+
Sbjct: 353 L 353
Score = 62.4 bits (150), Expect = 6e-08
Identities = 36/119 (30%), Positives = 64/119 (53%), Gaps = 3/119 (2%)
Frame = -1
Query: 349 DEFTLATVLNELADHLWVSEGKQLHSLMTKGGFF-TDCFCCNALLNLYSK--EDIHSALK 179
+E+ + L + + + G + +TK G F +D AL+ ++K D+ SA K
Sbjct: 130 NEYCFSGALRACWNREFAATGLVIFGFLTKTGHFHSDVSVGCALIETFAKGFADLDSAKK 189
Query: 178 MFDEMYDRSAVSWTIIVSGLLASGNTYTAFEALNSMQMAEVEPNSHTFGSLISCCGDVG 2
+FDEM D+++V+WT+I++ G A E M +A +P+ +TF S +S C ++G
Sbjct: 190 VFDEMPDKNSVTWTLIITRFAQLGCPEEAIELFLDMVIAGFQPDQYTFSSCLSACAELG 248
>ref|XP_002523781.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223536869|gb|EEF38507.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 661
Score = 84.0 bits (206), Expect = 2e-14
Identities = 44/120 (36%), Positives = 72/120 (60%), Gaps = 2/120 (1%)
Frame = -1
Query: 358 IRVDEFTLATVLNELADHLWVSE-GKQLHSLMTKGGFFTDCFCCNALLNLYSKED-IHSA 185
I+ + FT ATVL LAD +++ G Q+H+++ K GF F CN+L+N+YSK + +A
Sbjct: 193 IKPNPFTFATVLGALADSKAIADKGVQIHTMVIKNGFEATIFVCNSLINMYSKSGMVKNA 252
Query: 184 LKMFDEMYDRSAVSWTIIVSGLLASGNTYTAFEALNSMQMAEVEPNSHTFGSLISCCGDV 5
+FD M R A+SW +V+G +A+G A E +++A V+ + F S+I C ++
Sbjct: 253 KAVFDNMVTRDAISWNSMVAGYVANGLYLEAIEMFYHLRLAGVKLTNFIFSSVIKSCANI 312
Score = 63.9 bits (154), Expect = 2e-08
Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 1/115 (0%)
Frame = -1
Query: 349 DEFTLATVLNELADHLWVSEGKQLHSLMTKGGFFTDCFCCNALLNLYSKED-IHSALKMF 173
D TL+ VL A G Q+H K GF D +L+++Y K + + ++F
Sbjct: 95 DGSTLSCVLKACACLSCKKFGIQVHDYCVKSGFLEDISVGTSLVDMYMKSEYVEEGKRVF 154
Query: 172 DEMYDRSAVSWTIIVSGLLASGNTYTAFEALNSMQMAEVEPNSHTFGSLISCCGD 8
DEM +R+ VSWT ++ G +G A E MQ ++PN TF +++ D
Sbjct: 155 DEMEERNVVSWTSLLVGYAHNGLNMEALECFFEMQAGAIKPNPFTFATVLGALAD 209
Score = 62.8 bits (151), Expect = 5e-08
Identities = 38/115 (33%), Positives = 60/115 (52%), Gaps = 2/115 (1%)
Frame = -1
Query: 358 IRVDEFTLATVLNELADHLWVSEGKQLHSLMTKGGFFTDCFCCNALLNLYSK-EDIHSAL 182
+++ F ++V+ A+ + +QLH + KGGF D AL+ Y+K +I A
Sbjct: 295 VKLTNFIFSSVIKSCANIKELGFARQLHGQVLKGGFEYDHNIRTALMVAYNKGREIDDAF 354
Query: 181 KMFDEMYD-RSAVSWTIIVSGLLASGNTYTAFEALNSMQMAEVEPNSHTFGSLIS 20
K+F MY R+ VSWT I+SG L +G A M V PN +TF ++++
Sbjct: 355 KIFSMMYGIRNVVSWTAIISGHLQNGLAEQAVNLFCEMSREGVRPNDYTFSTILA 409
Score = 59.3 bits (142), Expect = 5e-07
Identities = 41/122 (33%), Positives = 61/122 (50%), Gaps = 3/122 (2%)
Frame = -1
Query: 358 IRVDEFTLATVLNEL-ADHLWVSEGKQLHSLMTKGGFFTDCFCCN-ALLNLYSKE-DIHS 188
+ +E+T ++V+N A V +GKQ H+ K F D C + AL+ +Y+K +I S
Sbjct: 494 VEPNEYTFSSVINACTAPTAAVEQGKQFHAWSIKSRF-NDALCVSSALVTMYAKRGEIES 552
Query: 187 ALKMFDEMYDRSAVSWTIIVSGLLASGNTYTAFEALNSMQMAEVEPNSHTFGSLISCCGD 8
A ++F R VSW +VSG G+ A E MQ +E + TF +IS C
Sbjct: 553 ANEVFRRQGVRDLVSWNSMVSGYAQHGHARKALEVFKEMQDQNLELDGVTFIGVISACTH 612
Query: 7 VG 2
G
Sbjct: 613 AG 614
Score = 56.6 bits (135), Expect = 3e-06
Identities = 34/116 (29%), Positives = 63/116 (54%), Gaps = 1/116 (0%)
Frame = -1
Query: 358 IRVDEFTLATVLNELADHLWVSEGKQLHSLMTKGGFFTDCFCCNALLNLYSK-EDIHSAL 182
+R +++T +T+L V ++H+ + K + ALL+ Y K +++ A
Sbjct: 397 VRPNDYTFSTILAAQP----VVSPFEVHAQVIKSDYEKSPSVGTALLDAYVKLGNLNEAS 452
Query: 181 KMFDEMYDRSAVSWTIIVSGLLASGNTYTAFEALNSMQMAEVEPNSHTFGSLISCC 14
K+F+ + D+ V+W+ +V+G +G+T A + L M VEPN +TF S+I+ C
Sbjct: 453 KVFERIDDKDIVAWSAMVAGYAQTGDTEGAVKILIQMAKKGVEPNEYTFSSVINAC 508
>gb|EOY33477.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao]
Length = 875
Score = 83.6 bits (205), Expect = 3e-14
Identities = 45/118 (38%), Positives = 68/118 (57%), Gaps = 1/118 (0%)
Frame = -1
Query: 358 IRVDEFTLATVLNELADHLWVSEGKQLHSLMTKGGFFTDCFCCNALLNLYSKEDI-HSAL 182
I+ + +TLA VL LAD V +G Q+HSL+ K GF T F CN+L+N+Y K + A
Sbjct: 199 IKPNAYTLAAVLGALADKGMVEKGVQVHSLIIKFGFETTIFVCNSLINMYLKSGMDEDAR 258
Query: 181 KMFDEMYDRSAVSWTIIVSGLLASGNTYTAFEALNSMQMAEVEPNSHTFGSLISCCGD 8
+FD M ++AV+W +++G + +G AFE M++A V+ F LI C +
Sbjct: 259 AVFDGMETKNAVTWNCMIAGYVTNGLDLAAFETFYHMRLAGVKLTRMAFAPLIKLCAN 316
Score = 57.0 bits (136), Expect = 3e-06
Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 2/121 (1%)
Frame = -1
Query: 358 IRVDEFTLATVLNELADHLW-VSEGKQLHSLMTKGGFFTDCFCCNALLNLYSKE-DIHSA 185
I+ +EFT ++VLN A + +GKQ H+ K +AL+ +Y+K +I +A
Sbjct: 499 IKPNEFTFSSVLNACAAPTAPLGQGKQFHAWAIKSKLSEALCVSSALVTMYAKRGNIDNA 558
Query: 184 LKMFDEMYDRSAVSWTIIVSGLLASGNTYTAFEALNSMQMAEVEPNSHTFGSLISCCGDV 5
++F +R VSW ++SG G+ A MQ VE + TF +IS C
Sbjct: 559 YQVFKRQPERDPVSWNSMISGYAQHGHANKALIVFEEMQRQNVEMDYITFIGVISACTHS 618
Query: 4 G 2
G
Sbjct: 619 G 619
Score = 55.1 bits (131), Expect = 1e-05
Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 2/115 (1%)
Frame = -1
Query: 358 IRVDEFTLATVLNELADHLWVSEGKQLHSLMTKGGFFTDCFCCNALLNLYSK-EDIHSAL 182
+++ A ++ A+H +S +QLH + K F D AL+ YSK ++ A
Sbjct: 300 VKLTRMAFAPLIKLCANHKELSFARQLHCRILKDDFAFDPKIKTALMVAYSKCSEMDDAF 359
Query: 181 KMFDEMYD-RSAVSWTIIVSGLLASGNTYTAFEALNSMQMAEVEPNSHTFGSLIS 20
K+F M++ ++ VSWT ++SG L +G A + M V PN T+ ++++
Sbjct: 360 KLFSAMHEAQNVVSWTAMISGHLQNGGIEQAANLFSLMNKEGVRPNHFTYSTILA 414
>ref|XP_004231236.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Solanum lycopersicum]
Length = 844
Score = 83.6 bits (205), Expect = 3e-14
Identities = 43/120 (35%), Positives = 72/120 (60%), Gaps = 1/120 (0%)
Frame = -1
Query: 358 IRVDEFTLATVLNELADHLWVSEGKQLHSLMTKGGFFTDCFCCNALLNLYSK-EDIHSAL 182
+ VD FT A++L+ A V +G+Q+HS + K G + CNAL+++YS+ +I +A
Sbjct: 468 VGVDAFTFASLLSGAASVGAVGKGEQIHSRVLKAGIQSSQSVCNALISMYSRCGNIEAAF 527
Query: 181 KMFDEMYDRSAVSWTIIVSGLLASGNTYTAFEALNSMQMAEVEPNSHTFGSLISCCGDVG 2
++F+ M DR+ +SWT I++G G + A E N M ++PN T+ +++S C VG
Sbjct: 528 QVFEGMEDRNVISWTSIITGFAKHGFAHRAVELFNQMLEDGIKPNEVTYIAVLSACSHVG 587
Score = 60.5 bits (145), Expect = 2e-07
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 5/120 (4%)
Frame = -1
Query: 349 DEFTLATVLNELADHLWVSEGKQLHSLMTKGGFFTDCFCCNALLNLYSKEDIHSAL---- 182
D FT + VL+ A+ + G+QLH + K D +L+++Y+K + ++
Sbjct: 266 DRFTFSGVLSACAEPGLSALGRQLHGGVIKSRLSADVCVGCSLVDMYAKSTMDGSMDDSR 325
Query: 181 KMFDEMYDRSAVSWTIIVSGLLASGN-TYTAFEALNSMQMAEVEPNSHTFGSLISCCGDV 5
K+FD M D + +SWT I++G + G+ A + M V+PN TF SL+ CG++
Sbjct: 326 KVFDRMADHNVMSWTAIITGYVQRGHYDMEAIKLYCRMIDGLVKPNHFTFSSLLKACGNL 385
>ref|NP_179644.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
gi|75337271|sp|Q9SIL5.1|PP165_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g20540 gi|4586036|gb|AAD25654.1| unknown protein
[Arabidopsis thaliana] gi|67633530|gb|AAY78689.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana] gi|330251931|gb|AEC07025.1| mitochondrial
editing factor 21 [Arabidopsis thaliana]
Length = 534
Score = 82.8 bits (203), Expect = 4e-14
Identities = 45/120 (37%), Positives = 66/120 (55%), Gaps = 1/120 (0%)
Frame = -1
Query: 358 IRVDEFTLATVLNELADHLWVSEGKQLHSLMTKGGFFTDCFCCNALLNLYSKEDIHS-AL 182
I DE +L +VL A + GK +H + GF CNAL+ +YSK + S A+
Sbjct: 237 IEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAI 296
Query: 181 KMFDEMYDRSAVSWTIIVSGLLASGNTYTAFEALNSMQMAEVEPNSHTFGSLISCCGDVG 2
++F +M + +SW+ ++SG GN + A E N MQ A+V+PN TF L+S C VG
Sbjct: 297 QLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVG 356
>ref|XP_006859052.1| hypothetical protein AMTR_s00068p00189110 [Amborella trichopoda]
gi|548863164|gb|ERN20519.1| hypothetical protein
AMTR_s00068p00189110 [Amborella trichopoda]
Length = 1082
Score = 82.4 bits (202), Expect = 6e-14
Identities = 38/120 (31%), Positives = 70/120 (58%), Gaps = 1/120 (0%)
Frame = -1
Query: 358 IRVDEFTLATVLNELADHLWVSEGKQLHSLMTKGGFFTDCFCCNALLNLYSK-EDIHSAL 182
IR DEF+L+T++N + EG+++H + K GF+ D F NAL+++Y+K D+ ++
Sbjct: 248 IRPDEFSLSTIVNACTSSEDLCEGQRIHGYLVKLGFYDDPFSSNALVDMYAKTSDLEASE 307
Query: 181 KMFDEMYDRSAVSWTIIVSGLLASGNTYTAFEALNSMQMAEVEPNSHTFGSLISCCGDVG 2
++F+++ +SW +++G + G + A E L M+ + PN T SL+ C +G
Sbjct: 308 RVFEKLSQPDIISWNALIAGFVLHGFYHKALELLEEMKFSGTSPNMFTLSSLLKACSVMG 367
Score = 66.6 bits (161), Expect = 3e-09
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Frame = -1
Query: 328 VLNELADHLWVSEGKQLHSLMTKGGFFTDCFCCNALLNLYSK-EDIHSALKMFDEMYDRS 152
+L EL+ + G Q+ + + K GF + CN L+NLYSK A K+F+E+++
Sbjct: 56 LLAELSRSKTIKPGLQIQTQIIKHGFLNEISLCNHLINLYSKARHFEEAHKVFNEIHEPD 115
Query: 151 AVSWTIIVSGLLASGNTYTAFEALNSMQMAEVEPNSHTFGSLISCCGDVG 2
VSWT IV+ +G A +A SM ++ N +T+ S++ CG G
Sbjct: 116 LVSWTAIVACFAQNGLGKEAIKAFCSMHKLGIKSNEYTYPSVLKACGIQG 165
>ref|XP_006408981.1| hypothetical protein EUTSA_v10001958mg [Eutrema salsugineum]
gi|557110137|gb|ESQ50434.1| hypothetical protein
EUTSA_v10001958mg [Eutrema salsugineum]
Length = 531
Score = 82.0 bits (201), Expect = 7e-14
Identities = 45/120 (37%), Positives = 65/120 (54%), Gaps = 1/120 (0%)
Frame = -1
Query: 358 IRVDEFTLATVLNELADHLWVSEGKQLHSLMTKGGFFTDCFCCNALLNLYSKEDIHS-AL 182
I DE +L +VL A + GK +H + GF CNAL+ +YSK + S A+
Sbjct: 237 IEPDEISLISVLPSCAHLGSLELGKWIHMYADRKGFLKQTGVCNALIEMYSKCGLISQAI 296
Query: 181 KMFDEMYDRSAVSWTIIVSGLLASGNTYTAFEALNSMQMAEVEPNSHTFGSLISCCGDVG 2
++F M + +SW+ ++SG GN + A E N MQ A+V+PN TF L+S C VG
Sbjct: 297 ELFSRMKRKDVISWSTMISGYAHHGNAHQAIETFNEMQRAKVKPNGITFLGLLSACSHVG 356
>ref|XP_006299486.1| hypothetical protein CARUB_v10015651mg [Capsella rubella]
gi|482568195|gb|EOA32384.1| hypothetical protein
CARUB_v10015651mg [Capsella rubella]
Length = 534
Score = 82.0 bits (201), Expect = 7e-14
Identities = 45/120 (37%), Positives = 66/120 (55%), Gaps = 1/120 (0%)
Frame = -1
Query: 358 IRVDEFTLATVLNELADHLWVSEGKQLHSLMTKGGFFTDCFCCNALLNLYSKEDIHS-AL 182
I DE +L +VL A + GK +H + F CNAL+ +YSK + S A+
Sbjct: 237 IEPDEISLISVLPSCAHLGSLELGKWIHMYAERRRFLKQTGVCNALIEMYSKCGVISQAI 296
Query: 181 KMFDEMYDRSAVSWTIIVSGLLASGNTYTAFEALNSMQMAEVEPNSHTFGSLISCCGDVG 2
++FD+M + +SW+ ++SG GN + A E N MQ A+V+PN TF L+S C VG
Sbjct: 297 QLFDQMKRKDVISWSTMISGYAHHGNAHRAIEIFNEMQRAKVKPNGITFLGLLSACSHVG 356
>ref|XP_004161848.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 769
Score = 81.6 bits (200), Expect = 1e-13
Identities = 46/120 (38%), Positives = 68/120 (56%), Gaps = 1/120 (0%)
Frame = -1
Query: 358 IRVDEFTLATVLNELADHLWVSEGKQLHSLMTKGGFFTDCFCCNALLNLYSKED-IHSAL 182
+R+++FTLAT LN A+ + EGK+ H L K G D NALL++Y+K + SA
Sbjct: 514 VRLNKFTLATALNSCANLASIEEGKKFHGLRIKLGTDVDVCVDNALLDMYAKCGCMTSAN 573
Query: 181 KMFDEMYDRSAVSWTIIVSGLLASGNTYTAFEALNSMQMAEVEPNSHTFGSLISCCGDVG 2
+F M +RS VSWT ++ G +G T A + + M+ E EPN TF +++ C G
Sbjct: 574 VVFRSMDERSVVSWTTMIMGFAHNGQTKEALQIFDEMRKGEAEPNHITFICVLNACSQGG 633
Score = 60.1 bits (144), Expect = 3e-07
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 1/119 (0%)
Frame = -1
Query: 358 IRVDEFTLATVLNELADHLWVSEGKQLHSLMTKGGFFTDCFCCNALLNLYSK-EDIHSAL 182
++ D FT A++L LA G Q+H + K G+ D N+L ++Y K + +
Sbjct: 413 VKPDNFTFASILTGLAALSEFRLGLQVHGQLVKSGYGNDICVGNSLCDMYVKNQKLLDGF 472
Query: 181 KMFDEMYDRSAVSWTIIVSGLLASGNTYTAFEALNSMQMAEVEPNSHTFGSLISCCGDV 5
K FDEM SWT + +G L G A + + M+ V N T + ++ C ++
Sbjct: 473 KAFDEMSSSDVCSWTQMAAGCLQCGEPMKALKVIYEMKNVGVRLNKFTLATALNSCANL 531
>ref|XP_004137635.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 769
Score = 81.6 bits (200), Expect = 1e-13
Identities = 46/120 (38%), Positives = 68/120 (56%), Gaps = 1/120 (0%)
Frame = -1
Query: 358 IRVDEFTLATVLNELADHLWVSEGKQLHSLMTKGGFFTDCFCCNALLNLYSKED-IHSAL 182
+R+++FTLAT LN A+ + EGK+ H L K G D NALL++Y+K + SA
Sbjct: 514 VRLNKFTLATALNSCANLASIEEGKKFHGLRIKLGTDVDVCVDNALLDMYAKCGCMTSAN 573
Query: 181 KMFDEMYDRSAVSWTIIVSGLLASGNTYTAFEALNSMQMAEVEPNSHTFGSLISCCGDVG 2
+F M +RS VSWT ++ G +G T A + + M+ E EPN TF +++ C G
Sbjct: 574 VVFRSMDERSVVSWTTMIMGFAHNGQTKEALQIFDEMRKGEAEPNHITFICVLNACSQGG 633
Score = 61.6 bits (148), Expect = 1e-07
Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 1/119 (0%)
Frame = -1
Query: 358 IRVDEFTLATVLNELADHLWVSEGKQLHSLMTKGGFFTDCFCCNALLNLYSK-EDIHSAL 182
++ D FT A++L LA G Q+H + K G+ D N+L ++Y K + +
Sbjct: 413 VKPDNFTFASILTGLAALSEFRLGLQVHGQLVKSGYGNDICVGNSLCDMYVKNQKLLDGF 472
Query: 181 KMFDEMYDRSAVSWTIIVSGLLASGNTYTAFEALNSMQMAEVEPNSHTFGSLISCCGDV 5
K FDEM SWT + +G L G A E + M+ V N T + ++ C ++
Sbjct: 473 KAFDEMSSSDVCSWTQMAAGCLQCGEPMKALEVIYEMKNVGVRLNKFTLATALNSCANL 531
>ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Vitis vinifera]
Length = 541
Score = 81.6 bits (200), Expect = 1e-13
Identities = 43/120 (35%), Positives = 63/120 (52%), Gaps = 1/120 (0%)
Frame = -1
Query: 358 IRVDEFTLATVLNELADHLWVSEGKQLHSLMTKGGFFTDCFCCNALLNLYSK-EDIHSAL 182
I DE +L +VL A + GK +H K GF + CNAL+ +Y+K I
Sbjct: 245 IEPDEISLVSVLPACAQLGALELGKWIHFYADKAGFLRNICVCNALIEMYAKCGSIDEGR 304
Query: 181 KMFDEMYDRSAVSWTIIVSGLLASGNTYTAFEALNSMQMAEVEPNSHTFGSLISCCGDVG 2
++FD+M +R +SW+ ++ GL G + A E MQ A++EPN TF L+S C G
Sbjct: 305 RLFDQMNERDVISWSTMIVGLANHGRAHEAIELFQEMQKAKIEPNIITFVGLLSACAHAG 364