BLASTX nr result

ID: Zingiber23_contig00034660 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00034660
         (370 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAZ14226.1| hypothetical protein OsJ_04151 [Oryza sativa Japo...    62   1e-07
gb|EAY76572.1| hypothetical protein OsI_04518 [Oryza sativa Indi...    62   1e-07
ref|NP_001044875.1| Os01g0860900 [Oryza sativa Japonica Group] g...    62   1e-07
tpg|DAA56717.1| TPA: hypothetical protein ZEAMMB73_375259 [Zea m...    61   1e-07
ref|NP_001144551.1| uncharacterized protein LOC100277552 [Zea ma...    61   1e-07
ref|XP_006646496.1| PREDICTED: nucleosome-remodeling factor subu...    57   3e-06
gb|AFW84480.1| hypothetical protein ZEAMMB73_031631 [Zea mays]         56   4e-06

>gb|EAZ14226.1| hypothetical protein OsJ_04151 [Oryza sativa Japonica Group]
          Length = 300

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 35/84 (41%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
 Frame = +3

Query: 126 DADLPPESIQVPIGGEGIDWAYLNAVFEREDSTKGSTNPKSSCHANXXXXXXXXXXXXXX 305
           D D PPESI +PIG E + ++ LN +++R+DSTKGSTNPKS+  A+              
Sbjct: 50  DPDFPPESITIPIGDE-VAFSELNPIYDRDDSTKGSTNPKSAAGASSNPIPAKSRSNSTR 108

Query: 306 XXXPPPV----IGLPSSIRPSAGR 365
               P       GLP+SIRP+  R
Sbjct: 109 IAGAPAAATTFFGLPASIRPAFTR 132


>gb|EAY76572.1| hypothetical protein OsI_04518 [Oryza sativa Indica Group]
          Length = 298

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 35/84 (41%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
 Frame = +3

Query: 126 DADLPPESIQVPIGGEGIDWAYLNAVFEREDSTKGSTNPKSSCHANXXXXXXXXXXXXXX 305
           D D PPESI +PIG E + ++ LN +++R+DSTKGSTNPKS+  A+              
Sbjct: 48  DPDFPPESITIPIGDE-VAFSELNPIYDRDDSTKGSTNPKSAAGASSNPIPAKSRSNSTR 106

Query: 306 XXXPPPV----IGLPSSIRPSAGR 365
               P       GLP+SIRP+  R
Sbjct: 107 IAGAPAAATTFFGLPASIRPAFTR 130


>ref|NP_001044875.1| Os01g0860900 [Oryza sativa Japonica Group]
           gi|56784813|dbj|BAD82034.1| unknown protein [Oryza
           sativa Japonica Group] gi|56785405|dbj|BAD82641.1|
           unknown protein [Oryza sativa Japonica Group]
           gi|113534406|dbj|BAF06789.1| Os01g0860900 [Oryza sativa
           Japonica Group]
          Length = 249

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 35/84 (41%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
 Frame = +3

Query: 126 DADLPPESIQVPIGGEGIDWAYLNAVFEREDSTKGSTNPKSSCHANXXXXXXXXXXXXXX 305
           D D PPESI +PIG E + ++ LN +++R+DSTKGSTNPKS+  A+              
Sbjct: 50  DPDFPPESITIPIGDE-VAFSELNPIYDRDDSTKGSTNPKSAAGASSNPIPAKSRSNSTR 108

Query: 306 XXXPPPV----IGLPSSIRPSAGR 365
               P       GLP+SIRP+  R
Sbjct: 109 IAGAPAAATTFFGLPASIRPAFTR 132


>tpg|DAA56717.1| TPA: hypothetical protein ZEAMMB73_375259 [Zea mays]
           gi|414879587|tpg|DAA56718.1| TPA: hypothetical protein
           ZEAMMB73_375259 [Zea mays]
          Length = 276

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 37/88 (42%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
 Frame = +3

Query: 126 DADLPPESIQVPIGGEGIDWAYLNAVFEREDSTKGSTNPK---SSCHANXXXXXXXXXXX 296
           D DLPPESI +PIG +   ++ LN ++ER+DSTKGSTNPK   ++  AN           
Sbjct: 43  DPDLPPESITIPIGDDAA-FSELNPIYERDDSTKGSTNPKFAAAAAVANPVAAKTRSNST 101

Query: 297 XXXXXXPPPV-----IGLPSSIRPSAGR 365
                 PPP       GLP+ IRP+  R
Sbjct: 102 RVAGAPPPPAAGTTFFGLPARIRPTFTR 129


>ref|NP_001144551.1| uncharacterized protein LOC100277552 [Zea mays]
           gi|195643726|gb|ACG41331.1| hypothetical protein [Zea
           mays]
          Length = 273

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 37/88 (42%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
 Frame = +3

Query: 126 DADLPPESIQVPIGGEGIDWAYLNAVFEREDSTKGSTNPK---SSCHANXXXXXXXXXXX 296
           D DLPPESI +PIG +   ++ LN ++ER+DSTKGSTNPK   ++  AN           
Sbjct: 43  DPDLPPESITIPIGDDAA-FSELNPIYERDDSTKGSTNPKFAAAAAVANPVAAKTRSNST 101

Query: 297 XXXXXXPPPV-----IGLPSSIRPSAGR 365
                 PPP       GLP+ IRP+  R
Sbjct: 102 RVAGAPPPPAAGTTFFGLPARIRPTFTR 129


>ref|XP_006646496.1| PREDICTED: nucleosome-remodeling factor subunit BPTF-like [Oryza
           brachyantha]
          Length = 256

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 26/46 (56%), Positives = 36/46 (78%)
 Frame = +3

Query: 126 DADLPPESIQVPIGGEGIDWAYLNAVFEREDSTKGSTNPKSSCHAN 263
           D D PPESI +PIG E + ++ LN +++R+DSTKGSTNPKS+  A+
Sbjct: 45  DPDFPPESITIPIGDE-VAFSELNPIYDRDDSTKGSTNPKSAAGAS 89


>gb|AFW84480.1| hypothetical protein ZEAMMB73_031631 [Zea mays]
          Length = 274

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 35/89 (39%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
 Frame = +3

Query: 126 DADLPPESIQVPIGGEGIDWAYLNAVFEREDSTKGSTNPKSSCH--ANXXXXXXXXXXXX 299
           D D PP+SI +PIG +   ++ LN ++ER+DSTKGSTNPKS+    AN            
Sbjct: 44  DPDFPPDSITIPIGDDAA-FSELNPMYERDDSTKGSTNPKSAAAAVANPIVAAKTRSNST 102

Query: 300 XXXXXPPP-------VIGLPSSIRPSAGR 365
                 PP         GLP+ IRP+  R
Sbjct: 103 RAAGGAPPPPASGTTFFGLPARIRPTFSR 131


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