BLASTX nr result

ID: Zingiber23_contig00034639 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00034639
         (256 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002467201.1| hypothetical protein SORBIDRAFT_01g021330 [S...   117   2e-24
ref|XP_006662372.1| PREDICTED: E3 ubiquitin-protein ligase RBBP6...   115   5e-24
dbj|BAK02808.1| predicted protein [Hordeum vulgare subsp. vulgare]    112   4e-23
tpg|DAA49895.1| TPA: hypothetical protein ZEAMMB73_472579 [Zea m...   110   2e-22
gb|ABB47659.1| transposon protein, putative, CACTA, En/Spm sub-c...   109   4e-22
ref|NP_001064665.2| Os10g0431000 [Oryza sativa Japonica Group] g...   109   4e-22
gb|EEE50995.1| hypothetical protein OsJ_31610 [Oryza sativa Japo...   109   4e-22
gb|EEC67002.1| hypothetical protein OsI_33708 [Oryza sativa Indi...   109   4e-22
gb|EMT12234.1| Retinoblastoma-binding protein 6 [Aegilops tauschii]   108   6e-22
ref|XP_004983056.1| PREDICTED: E3 ubiquitin-protein ligase RBBP6...   108   7e-22
ref|XP_004983055.1| PREDICTED: E3 ubiquitin-protein ligase RBBP6...   108   7e-22
ref|XP_003635247.1| PREDICTED: uncharacterized protein LOC100854...   107   1e-21
emb|CBI23464.3| unnamed protein product [Vitis vinifera]              107   1e-21
emb|CAN68806.1| hypothetical protein VITISV_001078 [Vitis vinifera]   107   1e-21
ref|XP_003572814.1| PREDICTED: uncharacterized protein LOC100823...   105   5e-21
ref|XP_002530663.1| retinoblastoma-binding protein, putative [Ri...   105   6e-21
ref|XP_002304286.2| hypothetical protein POPTR_0003s07640g [Popu...   102   5e-20
ref|XP_002304287.1| predicted protein [Populus trichocarpa]           102   5e-20
ref|XP_003571798.1| PREDICTED: uncharacterized protein LOC100842...   100   2e-19
gb|EMJ11588.1| hypothetical protein PRUPE_ppa000972mg [Prunus pe...    97   2e-18

>ref|XP_002467201.1| hypothetical protein SORBIDRAFT_01g021330 [Sorghum bicolor]
           gi|241921055|gb|EER94199.1| hypothetical protein
           SORBIDRAFT_01g021330 [Sorghum bicolor]
          Length = 886

 Score =  117 bits (292), Expect = 2e-24
 Identities = 54/83 (65%), Positives = 67/83 (80%)
 Frame = +3

Query: 3   TDFDLMISNAQTDEEYVDEGAMIPKSTSVLVRRVPGRPRKPIVTQRDKPNVVEDKIEELP 182
           TDFDLMISNAQTDEEY DE  MIPK+TSVL+RR+PGRPRKPIVT+ D+    ED +E++ 
Sbjct: 42  TDFDLMISNAQTDEEYADEATMIPKNTSVLIRRIPGRPRKPIVTEPDESKAAEDGVEQVM 101

Query: 183 PSSSMLAGDSATNRYHEEYEWDE 251
           P++S   GDS+  +YHEE EWD+
Sbjct: 102 PTASAFLGDSSM-KYHEESEWDD 123


>ref|XP_006662372.1| PREDICTED: E3 ubiquitin-protein ligase RBBP6-like [Oryza
           brachyantha]
          Length = 681

 Score =  115 bits (289), Expect = 5e-24
 Identities = 55/83 (66%), Positives = 67/83 (80%)
 Frame = +3

Query: 3   TDFDLMISNAQTDEEYVDEGAMIPKSTSVLVRRVPGRPRKPIVTQRDKPNVVEDKIEELP 182
           TDFDLMISNAQTDEEY DE  MIPK+TSVL+RR+PGRPRKPIVT+ ++  V ED++EE+ 
Sbjct: 42  TDFDLMISNAQTDEEYADEATMIPKNTSVLIRRIPGRPRKPIVTEPEEIKVAEDRVEEIM 101

Query: 183 PSSSMLAGDSATNRYHEEYEWDE 251
           PS S   GD A+ +Y EE EWD+
Sbjct: 102 PSGSTFLGD-ASMKYPEESEWDD 123


>dbj|BAK02808.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 935

 Score =  112 bits (281), Expect = 4e-23
 Identities = 53/83 (63%), Positives = 65/83 (78%)
 Frame = +3

Query: 3   TDFDLMISNAQTDEEYVDEGAMIPKSTSVLVRRVPGRPRKPIVTQRDKPNVVEDKIEELP 182
           TDFDLMISNAQTDEEY DE  MIPK+TSVL+RR+PGRPR PIVT+  +    E+++EE+ 
Sbjct: 73  TDFDLMISNAQTDEEYADESIMIPKNTSVLIRRIPGRPRMPIVTEPQEAIAAENRVEEIM 132

Query: 183 PSSSMLAGDSATNRYHEEYEWDE 251
           PS S   GDS+  +YHEE EWD+
Sbjct: 133 PSGSTFLGDSSM-KYHEESEWDD 154


>tpg|DAA49895.1| TPA: hypothetical protein ZEAMMB73_472579 [Zea mays]
          Length = 810

 Score =  110 bits (274), Expect = 2e-22
 Identities = 51/83 (61%), Positives = 65/83 (78%)
 Frame = +3

Query: 3   TDFDLMISNAQTDEEYVDEGAMIPKSTSVLVRRVPGRPRKPIVTQRDKPNVVEDKIEELP 182
           TDFDLMISNAQTDEEY DE  MIPK+TSVL+RR+PGRPRKPIVT+ ++    ED ++++ 
Sbjct: 42  TDFDLMISNAQTDEEYADEATMIPKNTSVLIRRIPGRPRKPIVTEPEETKAAEDGVQDVM 101

Query: 183 PSSSMLAGDSATNRYHEEYEWDE 251
           P+S    GDS+  +Y EE EWD+
Sbjct: 102 PTSGAFLGDSSM-KYPEESEWDD 123


>gb|ABB47659.1| transposon protein, putative, CACTA, En/Spm sub-class, expressed
           [Oryza sativa Japonica Group]
          Length = 916

 Score =  109 bits (272), Expect = 4e-22
 Identities = 52/83 (62%), Positives = 64/83 (77%)
 Frame = +3

Query: 3   TDFDLMISNAQTDEEYVDEGAMIPKSTSVLVRRVPGRPRKPIVTQRDKPNVVEDKIEELP 182
           TDFDLMISNAQTDEEY DE  MIPK+TSVL+RR+PGRPRKPIVT+ ++   +E ++EE  
Sbjct: 42  TDFDLMISNAQTDEEYADEATMIPKNTSVLIRRIPGRPRKPIVTEPEETKAMEGRVEETM 101

Query: 183 PSSSMLAGDSATNRYHEEYEWDE 251
           PS S    D A+ +Y EE EWD+
Sbjct: 102 PSGSAFLAD-ASMKYPEESEWDD 123


>ref|NP_001064665.2| Os10g0431000 [Oryza sativa Japonica Group]
           gi|255679428|dbj|BAF26579.2| Os10g0431000, partial
           [Oryza sativa Japonica Group]
          Length = 473

 Score =  109 bits (272), Expect = 4e-22
 Identities = 52/83 (62%), Positives = 64/83 (77%)
 Frame = +3

Query: 3   TDFDLMISNAQTDEEYVDEGAMIPKSTSVLVRRVPGRPRKPIVTQRDKPNVVEDKIEELP 182
           TDFDLMISNAQTDEEY DE  MIPK+TSVL+RR+PGRPRKPIVT+ ++   +E ++EE  
Sbjct: 42  TDFDLMISNAQTDEEYADEATMIPKNTSVLIRRIPGRPRKPIVTEPEETKAMEGRVEETM 101

Query: 183 PSSSMLAGDSATNRYHEEYEWDE 251
           PS S    D A+ +Y EE EWD+
Sbjct: 102 PSGSAFLAD-ASMKYPEESEWDD 123


>gb|EEE50995.1| hypothetical protein OsJ_31610 [Oryza sativa Japonica Group]
          Length = 892

 Score =  109 bits (272), Expect = 4e-22
 Identities = 52/83 (62%), Positives = 64/83 (77%)
 Frame = +3

Query: 3   TDFDLMISNAQTDEEYVDEGAMIPKSTSVLVRRVPGRPRKPIVTQRDKPNVVEDKIEELP 182
           TDFDLMISNAQTDEEY DE  MIPK+TSVL+RR+PGRPRKPIVT+ ++   +E ++EE  
Sbjct: 42  TDFDLMISNAQTDEEYADEATMIPKNTSVLIRRIPGRPRKPIVTEPEETKAMEGRVEETM 101

Query: 183 PSSSMLAGDSATNRYHEEYEWDE 251
           PS S    D A+ +Y EE EWD+
Sbjct: 102 PSGSAFLAD-ASMKYPEESEWDD 123


>gb|EEC67002.1| hypothetical protein OsI_33708 [Oryza sativa Indica Group]
          Length = 894

 Score =  109 bits (272), Expect = 4e-22
 Identities = 52/83 (62%), Positives = 64/83 (77%)
 Frame = +3

Query: 3   TDFDLMISNAQTDEEYVDEGAMIPKSTSVLVRRVPGRPRKPIVTQRDKPNVVEDKIEELP 182
           TDFDLMISNAQTDEEY DE  MIPK+TSVL+RR+PGRPRKPIVT+ ++   +E ++EE  
Sbjct: 42  TDFDLMISNAQTDEEYADEATMIPKNTSVLIRRIPGRPRKPIVTEPEETKAMEGRVEETM 101

Query: 183 PSSSMLAGDSATNRYHEEYEWDE 251
           PS S    D A+ +Y EE EWD+
Sbjct: 102 PSGSAFLAD-ASMKYPEESEWDD 123


>gb|EMT12234.1| Retinoblastoma-binding protein 6 [Aegilops tauschii]
          Length = 786

 Score =  108 bits (271), Expect = 6e-22
 Identities = 52/83 (62%), Positives = 64/83 (77%)
 Frame = +3

Query: 3   TDFDLMISNAQTDEEYVDEGAMIPKSTSVLVRRVPGRPRKPIVTQRDKPNVVEDKIEELP 182
           TDFDLMISNAQTDEEY DE  MIPK+TSVL+RR+PGRPR PIVT+  +    E+++EE+ 
Sbjct: 42  TDFDLMISNAQTDEEYADESIMIPKNTSVLIRRIPGRPRMPIVTEPQEAIAAENRVEEIV 101

Query: 183 PSSSMLAGDSATNRYHEEYEWDE 251
           PS S   GDS+  +Y EE EWD+
Sbjct: 102 PSGSAFLGDSSM-KYPEESEWDD 123


>ref|XP_004983056.1| PREDICTED: E3 ubiquitin-protein ligase RBBP6-like isoform X2
           [Setaria italica]
          Length = 900

 Score =  108 bits (270), Expect = 7e-22
 Identities = 54/83 (65%), Positives = 66/83 (79%)
 Frame = +3

Query: 3   TDFDLMISNAQTDEEYVDEGAMIPKSTSVLVRRVPGRPRKPIVTQRDKPNVVEDKIEELP 182
           TDFDLMISNAQTDEEY DE  MIPK+TSVL+RR+PGRPRKPIVT+ ++  V ED +E  P
Sbjct: 42  TDFDLMISNAQTDEEYADEATMIPKNTSVLIRRIPGRPRKPIVTEPEESKVTEDVLEVAP 101

Query: 183 PSSSMLAGDSATNRYHEEYEWDE 251
            +S+ L GDS+  +Y EE EWD+
Sbjct: 102 AASAFL-GDSSM-KYPEESEWDD 122


>ref|XP_004983055.1| PREDICTED: E3 ubiquitin-protein ligase RBBP6-like isoform X1
           [Setaria italica]
          Length = 901

 Score =  108 bits (270), Expect = 7e-22
 Identities = 54/83 (65%), Positives = 66/83 (79%)
 Frame = +3

Query: 3   TDFDLMISNAQTDEEYVDEGAMIPKSTSVLVRRVPGRPRKPIVTQRDKPNVVEDKIEELP 182
           TDFDLMISNAQTDEEY DE  MIPK+TSVL+RR+PGRPRKPIVT+ ++  V ED +E  P
Sbjct: 42  TDFDLMISNAQTDEEYADEATMIPKNTSVLIRRIPGRPRKPIVTEPEESKVTEDVLEVAP 101

Query: 183 PSSSMLAGDSATNRYHEEYEWDE 251
            +S+ L GDS+  +Y EE EWD+
Sbjct: 102 AASAFL-GDSSM-KYPEESEWDD 122


>ref|XP_003635247.1| PREDICTED: uncharacterized protein LOC100854867 [Vitis vinifera]
          Length = 823

 Score =  107 bits (268), Expect = 1e-21
 Identities = 50/85 (58%), Positives = 70/85 (82%), Gaps = 1/85 (1%)
 Frame = +3

Query: 3   TDFDLMISNAQTDEEYVDEGAMIPKSTSVLVRRVPGRPRKPIVTQRDKPNVVEDKIEELP 182
           TDFDL+++NAQT+EEY+DE  +IPK+TSVL+RRVPGRPR PIVT++D+P  VE+K++E  
Sbjct: 42  TDFDLVVTNAQTNEEYLDEAMLIPKNTSVLIRRVPGRPRMPIVTEKDEPK-VENKVDEAQ 100

Query: 183 PSSSMLAG-DSATNRYHEEYEWDEF 254
           P++S   G DS+  +Y ++ EWDEF
Sbjct: 101 PTNSNFVGADSSAMKYPDDSEWDEF 125


>emb|CBI23464.3| unnamed protein product [Vitis vinifera]
          Length = 828

 Score =  107 bits (268), Expect = 1e-21
 Identities = 50/85 (58%), Positives = 70/85 (82%), Gaps = 1/85 (1%)
 Frame = +3

Query: 3   TDFDLMISNAQTDEEYVDEGAMIPKSTSVLVRRVPGRPRKPIVTQRDKPNVVEDKIEELP 182
           TDFDL+++NAQT+EEY+DE  +IPK+TSVL+RRVPGRPR PIVT++D+P  VE+K++E  
Sbjct: 42  TDFDLVVTNAQTNEEYLDEAMLIPKNTSVLIRRVPGRPRMPIVTEKDEPK-VENKVDEAQ 100

Query: 183 PSSSMLAG-DSATNRYHEEYEWDEF 254
           P++S   G DS+  +Y ++ EWDEF
Sbjct: 101 PTNSNFVGADSSAMKYPDDSEWDEF 125


>emb|CAN68806.1| hypothetical protein VITISV_001078 [Vitis vinifera]
          Length = 828

 Score =  107 bits (268), Expect = 1e-21
 Identities = 50/85 (58%), Positives = 70/85 (82%), Gaps = 1/85 (1%)
 Frame = +3

Query: 3   TDFDLMISNAQTDEEYVDEGAMIPKSTSVLVRRVPGRPRKPIVTQRDKPNVVEDKIEELP 182
           TDFDL+++NAQT+EEY+DE  +IPK+TSVL+RRVPGRPR PIVT++D+P  VE+K++E  
Sbjct: 42  TDFDLVVTNAQTNEEYLDEAMLIPKNTSVLIRRVPGRPRMPIVTEKDEPK-VENKVDEAQ 100

Query: 183 PSSSMLAG-DSATNRYHEEYEWDEF 254
           P++S   G DS+  +Y ++ EWDEF
Sbjct: 101 PTNSNFVGADSSAMKYPDDSEWDEF 125


>ref|XP_003572814.1| PREDICTED: uncharacterized protein LOC100823388 [Brachypodium
           distachyon]
          Length = 948

 Score =  105 bits (263), Expect = 5e-21
 Identities = 50/83 (60%), Positives = 65/83 (78%)
 Frame = +3

Query: 3   TDFDLMISNAQTDEEYVDEGAMIPKSTSVLVRRVPGRPRKPIVTQRDKPNVVEDKIEELP 182
           TDFDLMISNAQTDEEY DE  MIPK+TSVL+RR+PGRPR PIVT+ ++    E+K+E++ 
Sbjct: 105 TDFDLMISNAQTDEEYADESIMIPKNTSVLIRRIPGRPRMPIVTEPEQVIAAENKVEQVM 164

Query: 183 PSSSMLAGDSATNRYHEEYEWDE 251
           P+ S   GDS+  ++ EE EWD+
Sbjct: 165 PAGSAFFGDSSM-KFPEESEWDD 186


>ref|XP_002530663.1| retinoblastoma-binding protein, putative [Ricinus communis]
           gi|223529796|gb|EEF31732.1| retinoblastoma-binding
           protein, putative [Ricinus communis]
          Length = 868

 Score =  105 bits (262), Expect = 6e-21
 Identities = 52/85 (61%), Positives = 68/85 (80%), Gaps = 1/85 (1%)
 Frame = +3

Query: 3   TDFDLMISNAQTDEEYVDEGAMIPKSTSVLVRRVPGRPRKPIVTQRDKPNVVEDKIEELP 182
           TDFDL+++NAQT+EEY+DEG +IPK+TSVL+RRVPGRPR PIVT+++    VE+K+EE P
Sbjct: 42  TDFDLVVTNAQTNEEYLDEGMLIPKNTSVLIRRVPGRPRMPIVTEQEPK--VENKVEETP 99

Query: 183 -PSSSMLAGDSATNRYHEEYEWDEF 254
              SS  A DS+  +Y E+ EWDEF
Sbjct: 100 LEKSSFSAPDSSAMKYTEDNEWDEF 124


>ref|XP_002304286.2| hypothetical protein POPTR_0003s07640g [Populus trichocarpa]
           gi|550342650|gb|EEE79265.2| hypothetical protein
           POPTR_0003s07640g [Populus trichocarpa]
          Length = 865

 Score =  102 bits (254), Expect = 5e-20
 Identities = 49/85 (57%), Positives = 67/85 (78%), Gaps = 1/85 (1%)
 Frame = +3

Query: 3   TDFDLMISNAQTDEEYVDEGAMIPKSTSVLVRRVPGRPRKPIVTQRDKPNVVEDKIEE-L 179
           TDFDL+++NAQT+EEY+DE  +IPK+TSVL+RRVPGRPR PIVT+++    +E K+E+ L
Sbjct: 42  TDFDLVVTNAQTNEEYLDEAMLIPKNTSVLIRRVPGRPRLPIVTEQEPK--LETKVEDTL 99

Query: 180 PPSSSMLAGDSATNRYHEEYEWDEF 254
           P   S +  DS++ RY E+ EWDEF
Sbjct: 100 PEKGSFMGADSSSMRYTEDNEWDEF 124


>ref|XP_002304287.1| predicted protein [Populus trichocarpa]
          Length = 268

 Score =  102 bits (254), Expect = 5e-20
 Identities = 49/85 (57%), Positives = 67/85 (78%), Gaps = 1/85 (1%)
 Frame = +3

Query: 3   TDFDLMISNAQTDEEYVDEGAMIPKSTSVLVRRVPGRPRKPIVTQRDKPNVVEDKIEE-L 179
           TDFDL+++NAQT+EEY+DE  +IPK+TSVL+RRVPGRPR PIVT+++    +E K+E+ L
Sbjct: 42  TDFDLVVTNAQTNEEYLDEAMLIPKNTSVLIRRVPGRPRLPIVTEQEPK--LETKVEDTL 99

Query: 180 PPSSSMLAGDSATNRYHEEYEWDEF 254
           P   S +  DS++ RY E+ EWDEF
Sbjct: 100 PEKGSFMGADSSSMRYTEDNEWDEF 124


>ref|XP_003571798.1| PREDICTED: uncharacterized protein LOC100842763 [Brachypodium
           distachyon]
          Length = 880

 Score =  100 bits (249), Expect = 2e-19
 Identities = 49/82 (59%), Positives = 63/82 (76%)
 Frame = +3

Query: 6   DFDLMISNAQTDEEYVDEGAMIPKSTSVLVRRVPGRPRKPIVTQRDKPNVVEDKIEELPP 185
           DFDLMISNAQTDEEY +E  MIPK+TSVL+RR+PGRPR PIVT+ ++    E+++ E+ P
Sbjct: 43  DFDLMISNAQTDEEYAEESIMIPKNTSVLIRRMPGRPRMPIVTEPEEIIGAENRVGEVMP 102

Query: 186 SSSMLAGDSATNRYHEEYEWDE 251
           S S   GDS+  +Y EE EWD+
Sbjct: 103 SGSAFLGDSSM-KYPEESEWDD 123


>gb|EMJ11588.1| hypothetical protein PRUPE_ppa000972mg [Prunus persica]
          Length = 944

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 48/84 (57%), Positives = 63/84 (75%), Gaps = 1/84 (1%)
 Frame = +3

Query: 3   TDFDLMISNAQTDEEYVDEGAMIPKSTSVLVRRVPGRPRKPIVTQRDKPNVVEDKIEELP 182
           TDFDL+++NAQT+EEY+DE  +IPK+TSVL+RRVPGRPR PIVT  D    VEDK+E   
Sbjct: 42  TDFDLVVTNAQTNEEYLDEAMLIPKNTSVLIRRVPGRPRMPIVT--DSEPKVEDKVEYTE 99

Query: 183 PS-SSMLAGDSATNRYHEEYEWDE 251
           P  +S L  DS+  +Y +E +WD+
Sbjct: 100 PERTSFLTADSSAMKYPDESDWDD 123


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