BLASTX nr result

ID: Zingiber23_contig00034543 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00034543
         (344 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61886.1| hypothetical protein VITISV_030710 [Vitis vinifera]   101   1e-19
ref|XP_002534745.1| conserved hypothetical protein [Ricinus comm...    52   4e-13
gb|AFW85306.1| hypothetical protein ZEAMMB73_849452 [Zea mays]         70   2e-10

>emb|CAN61886.1| hypothetical protein VITISV_030710 [Vitis vinifera]
          Length = 273

 Score =  101 bits (251), Expect = 1e-19
 Identities = 59/95 (62%), Positives = 67/95 (70%), Gaps = 6/95 (6%)
 Frame = +2

Query: 62  PFPQLRESKKLNQTLVFSPAPLFFA---GTQSPLTTNQQTSSSGWVLPVSTTRKN---NQ 223
           P   LR  +      +F+P PL +    GT+SPLTTNQQTSS GWVLPVSTTRK    N+
Sbjct: 128 PSDLLRAPRGDESRQLFTP-PLVWTDSNGTKSPLTTNQQTSS-GWVLPVSTTRKKKQPNE 185

Query: 224 METATNYGSWPRQRPRLRGDQSKRFRLDDDARPGL 328
           M+TATNYGSWPRQRPR RGD+S R RLDD   PGL
Sbjct: 186 MKTATNYGSWPRQRPRRRGDRSNRERLDDVFLPGL 220


>ref|XP_002534745.1| conserved hypothetical protein [Ricinus communis]
           gi|223524642|gb|EEF27636.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 98

 Score = 52.4 bits (124), Expect(2) = 4e-13
 Identities = 25/29 (86%), Positives = 25/29 (86%)
 Frame = -2

Query: 301 AKPLALISPEPRTLSGPRAIVSCCFHLVV 215
           A PLA I P PRTLSGPRAIVSCCFHLVV
Sbjct: 36  AFPLAPIPPMPRTLSGPRAIVSCCFHLVV 64



 Score = 47.8 bits (112), Expect(2) = 4e-13
 Identities = 25/33 (75%), Positives = 27/33 (81%)
 Frame = -3

Query: 219 LFFLVVDTGKTQPDDDVCWLVVRGL*VPAKKRG 121
           +FFLVVDTGKTQP DDV WLVVRGL V A  +G
Sbjct: 64  VFFLVVDTGKTQP-DDVYWLVVRGLLVSAYPKG 95


>gb|AFW85306.1| hypothetical protein ZEAMMB73_849452 [Zea mays]
          Length = 74

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 31/35 (88%), Positives = 33/35 (94%)
 Frame = +2

Query: 224 METATNYGSWPRQRPRLRGDQSKRFRLDDDARPGL 328
           METATNYGSWPRQRPR RGDQ+K+ RLDDDARPGL
Sbjct: 1   METATNYGSWPRQRPRRRGDQNKKSRLDDDARPGL 35


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