BLASTX nr result

ID: Zingiber23_contig00034512 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00034512
         (430 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ESW33901.1| hypothetical protein PHAVU_001G107600g [Phaseolus...    66   6e-09
ref|XP_002530950.1| r2r3-myb transcription factor, putative [Ric...    56   6e-06
ref|XP_006829805.1| hypothetical protein AMTR_s00119p00069270 [A...    55   7e-06

>gb|ESW33901.1| hypothetical protein PHAVU_001G107600g [Phaseolus vulgaris]
          Length = 333

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 54/168 (32%), Positives = 73/168 (43%), Gaps = 55/168 (32%)
 Frame = -1

Query: 364 VYAPHLQNCGSSTYASNMENISGLLQRWTRSSQ---KKTDPVPIQD-------------- 236
           V +  L    SSTYAS+ ENIS LL+ W RSS    K++    +Q               
Sbjct: 157 VSSGRLSQSQSSTYASSTENISRLLEGWMRSSPKALKRSQDEELQSIDDDNNNNNNFENT 216

Query: 235 ---LKCHSIKAAD------------QGSCDVVSDQEFRALVPFEEPTSVVWDES------ 119
              LKC S+ A +            +G  D+VS +EF +++ FE   +  WD+S      
Sbjct: 217 NKLLKCASLPALNLHHHRKRNKDEQEGVVDIVSHEEFDSILSFENLNNAAWDKSTCDSMP 276

Query: 118 --SSEATLCGAHQFH---------------PLSMLENWLLDEAVGMVE 26
             S EA    +H+                 PLS LE WLLDE+VG VE
Sbjct: 277 DKSPEAAAESSHEVFCEERIRQKSENNTAPPLSFLEKWLLDESVGQVE 324


>ref|XP_002530950.1| r2r3-myb transcription factor, putative [Ricinus communis]
           gi|223529465|gb|EEF31422.1| r2r3-myb transcription
           factor, putative [Ricinus communis]
          Length = 365

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 50/174 (28%), Positives = 71/174 (40%), Gaps = 71/174 (40%)
 Frame = -1

Query: 334 SSTYASNMENISGLLQRWTRSSQKKTDPVPIQD------------------LKCHSIKAA 209
           +++YAS+ ENIS LL+ W R S K  D V I++                  L+C+  KA 
Sbjct: 182 TASYASSTENISRLLEGWMRPSPKPNDHVIIKEKWSQNDGSIGDNLVATTSLQCYRPKAD 241

Query: 208 DQ--------GSC------DVVSDQEFRALVPFEEPTSVVWDESS---------SEATLC 98
           ++        G C      D++S +EF +++ FE   +V WD  S         S +T+ 
Sbjct: 242 EENGRGGGGGGGCSSMGGGDLISHEEFESILSFENLNNVAWDHKSTSDSTTVATSASTIK 301

Query: 97  GAHQFH-----------------------------PLSMLENWLLDEA-VGMVE 26
           G HQ                               PLS LE WLLDE+  G VE
Sbjct: 302 GCHQESSASDHQEKENVTAGFTENKKQKSDQNNNPPLSFLEKWLLDESGTGQVE 355


>ref|XP_006829805.1| hypothetical protein AMTR_s00119p00069270 [Amborella trichopoda]
           gi|548835386|gb|ERM97221.1| hypothetical protein
           AMTR_s00119p00069270 [Amborella trichopoda]
          Length = 212

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 40/116 (34%), Positives = 56/116 (48%), Gaps = 18/116 (15%)
 Frame = -1

Query: 334 SSTYASNMENISGLLQRWTRSSQK--KTDPVPIQDLKCHSIKAADQGSCDVVSDQ----- 176
           SSTYAS+ ENIS LL+ W RSS K  K +    Q     +I+A D G  + V+D+     
Sbjct: 84  SSTYASSTENISRLLEGWMRSSPKAQKIEATNEQKPLIFNIRATDSGKHNRVNDENGKSD 143

Query: 175 -----------EFRALVPFEEPTSVVWDESSSEATLCGAHQFHPLSMLENWLLDEA 41
                       F + V +E P + + +E      +       PLS+LE WL+DEA
Sbjct: 144 MISHEDLESLLSFDSTVLYESPQATISEELKDAMEISAQ---PPLSLLEKWLMDEA 196


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